Ctenopharyngodon idella (grass carp): 127510581
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Entry
127510581 CDS
T08802
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cide04054
]
127510581
Pattern recognition receptors [BR:
cide04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
127510581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
FISNA
PRY
NOD2_WH
LRR_6
SPRY
Motif
Other DBs
NCBI-GeneID:
127510581
NCBI-ProteinID:
XP_051746205
LinkDB
All DBs
Position
4:complement(17733313..17769540)
Genome browser
AA seq
1104 aa
AA seq
DB search
MNGASKMSFHDTREEGDVVHSQRSGSPEPSCVSMKSDGAVASDPVDDRTRDLQPDSHQPV
DDELQRVKDQHKTSMKNKYESLFKSLNLQENQTFLKRIYTQPYIIEDESEGVNEEHEVLH
MERTARTQHSQDNAIYCNDIFKASLEPGCEEKDKIKAVLTKGIAGIGKTVSVAKFVLDWA
EGKANQDVDFMFVLPFRELNLIGDHQYSLDRLLLDFHPELKDLDSKIYEECKVVFIFDGL
DESRITLMFSDSEIFSDVIETSSVGVLISNLMKGELLPSALIWITSRPAAANQIPSKYIN
RVTEIQGFDEPQKEEYFRKRISDEHQANKIISHIRRARSLHIMCNIPVFCWISSTVFQNI
LKQDDSTVIPQTLTEMYIQFLRIQINMKNQKYEERDPEKLLQSNRKMIVKLGELAFKQLM
KGNVMFYEEDLRESGIDVTDTSVYSGICTEMFKEESVIHQKKVYSFIHLSFQEFLAAFYV
FYSHLMKNMEPLHCFLDDKHKRYRSKKISLYELLILAVNKSLWSKTGHLDLFLRFLLGVS
LESNQRILQDLLANTEYSSKTIKGFTRHIENRIKDYFCVSADKSINLFLCLLEMNDQTLS
REIQEFVKSDKEVYLSPSFCSAVAHMIQMSEEVLDEFDHMKYNTPDDGRWRMIPAVINCR
KALLAGCHLSDQHCAILSSVLQSSNSHLRELNLSFNYLQDSGVKLLSVGLKSSLCQLNIL
RLAGCGLSDHSCENLSSALQSNSHLRELDLSYNGLQDSGVKLLFVGLKSSHCELNTLRLV
FCNLTGQCCESLSSALQSSNSCLRELDLSNNDLQNSGVKLLSVGLKSSHCQLNVLRLSGC
MVTEEGCRYLSSALSSNPSHLRELDLSYNHPGESGVKLLSDTLNLPNCTLDKLNVDHGGE
FRITTGPHKYACDLTLDPNTANNNLILSEEYRKVTYVEEYQSYPDHPERFDKRPHVLCRE
SLSGRCYWEAEWSGCADISVAYKGIGRKGKCEDTVYGFNKNSWCLVCRDDTFDVWHSHKC
TNTRVPSSIYKRAGVYLDVSAGTLSFYSVSDTHTLTHIHTYTSSFTEPVYAGFGFMVHPY
NSSVSVCQIEKPVSNNTDATCPPE
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcgcttctaaaatgagtttccatgacaccagagaggagggtgatgttgttcac
tcccagagatcaggatctccagagcccagctgtgtgtctatgaagagtgatggagcagta
gcctctgatcctgtagatgatcggactagagacctgcagcctgattctcaccaaccagta
gatgatgaactacagagagtcaaagaccaacacaaaaccagcatgaaaaataagtatgag
agcttatttaagagcctcaatctacaagagaatcaaaccttcctgaaaaggatctataca
cagccttacatcatagaggatgagagtgaaggagtgaatgaagaacatgaggttttacac
atggagagaacagccagaacacaacactcacaagacaatgcaatctactgcaatgacatc
ttcaaagcttcacttgaaccaggatgtgaggagaaagacaaaatcaaggctgttcttact
aaaggcattgctggaattggaaaaaccgtctctgttgcgaagttcgttctggactgggct
gagggaaaagccaatcaggatgtagatttcatgtttgttcttccatttcgagagctgaac
ttgattggagatcatcagtacagtcttgacagacttctgttggactttcatcctgaactt
aaagatctggactcaaagatttatgaggagtgtaaagttgtgttcatctttgatggtctg
gatgaaagcagaattacactaatgttttcagacagtgagattttttccgatgtgattgag
acttcatcagtgggtgtgttgatatcaaacctcatgaaaggagagctgcttccctctgct
ctcatctggatcacatccagaccagcagcagccaatcagatcccttccaaatacatcaac
cgtgtgacagaaattcagggattcgatgagcctcagaaggaggaatatttcaggaagaga
atcagtgatgagcatcaagccaacaaaatcatctcacacatcagaagagcaagaagcctc
cacatcatgtgcaacatacctgtcttctgctggatctcgtctactgtgtttcaaaacatc
ctgaaacaagatgacagtacagtaatccctcaaactctgactgaaatgtacatccagttc
ctgcggattcagatcaacatgaagaatcagaagtatgaagagagagatccagaaaaactc
ctgcagtccaacagaaaaatgattgtaaaacttggtgaactggctttcaaacagctgatg
aagggcaatgtgatgttctatgaggaggacctgagagagagtggcatagatgtcactgac
acctcagtgtattctgggatttgcactgagatgtttaaggaggaatctgtgattcatcag
aagaaagtctacagcttcatacatctaagctttcaggagtttctagccgctttctatgtg
ttttactcccatctaatgaaaaacatggaaccattgcattgctttctggatgataaacat
aagaggtacagatctaagaaaatatcgctgtatgaactactgatattagcagttaataaa
tccctttggagtaaaactggacacctggatctgttcctgcggttccttctgggtgtctca
ttggagtccaatcagagaatcttacaggatctactggcaaacacagagtacagctccaag
accatcaagggattcacacggcacattgaaaatagaatcaaggactatttctgtgtttca
gcagacaaatccattaatctgttcctctgtttgctggaaatgaatgatcagactctgtcc
agagagattcaggagtttgtgaaatcagataaagaggtgtatctctctccttcattttgc
tcagcagtagctcacatgattcagatgtcagaggaggtgctggatgagtttgatcacatg
aaatataacacaccagacgatggtagatggagaatgataccagctgtgataaactgcaga
aaagctctacttgctggatgtcatctctctgatcagcattgtgcaattttgtcttcagtt
ctacaatcatctaactcccatcttagagagctcaacctgagtttcaattatctacaggat
tcaggagtgaagctgctctctgttggactgaagagttcactctgtcaactgaacatactg
agacttgctggatgtggtctgtctgatcatagctgtgaaaatttgtcttcagctcttcaa
tcaaactcccatctcagagagctggacctgagctacaatggcctacaggattcaggtgtg
aagttgctctttgttggactgaagagttcgcactgtgaactgaacacactaagattggtc
ttctgtaatctcactggtcagtgctgtgaaagtttgtcttcagccctacaatcttcaaat
tcctgcttgagagagctggacctgagtaacaatgacctgcagaattcaggagtaaagcta
ctttctgtgggactgaagagttcacattgtcaactgaacgtactgagattgtctggctgc
atggtgacagaggaaggctgtcgttatctgtcttcagctctgagttcaaacccctcacac
ctgagagagctggatctgagctacaatcacccaggagaatcaggagtcaagctgctctct
gatacactgaaccttccaaactgcacactggacaaactcaatgtggatcatggaggagag
ttcaggattaccacaggaccacacaaatatgcctgtgatctcacactggatccaaacaca
gcaaacaataatctcattctctctgaagaatacagaaaggtgacatatgtggaagagtat
cagtcatatcctgatcatccagagagatttgataagcgtccccatgttctgtgtagagag
agtctgtctggacgctgttactgggaggctgaatggagtggatgtgctgatatatcagtg
gcatataaaggaatcggcaggaaagggaagtgtgaagacactgtgtatggattcaataaa
aactcttggtgtctagtctgtcgtgatgacacattcgatgtctggcacagtcataagtgc
actaacacacgtgtcccttcaagcatctataagagagctggagtgtatttggacgtgtca
gctggcactctgtccttctacagtgtttctgacacacacacactcacacacatacacaca
tacacatcctcattcactgagcctgtctatgctggatttgggttcatggttcatccttac
aactcctcagtgtctgtgtgtcagattgaaaagcctgtgagcaacaacacagatgccaca
tgcccacctgaatga
DBGET
integrated database retrieval system
