Ctenopharyngodon idella (grass carp): 127510586
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Entry
127510586 CDS
T08802
Name
(RefSeq) NLR family CARD domain-containing protein 3-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cide04054
]
127510586
Pattern recognition receptors [BR:
cide04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
127510586
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NACHT
FISNA
NLRC4_HD2
NOD2_WH
PRY
SPRY
LRR_6
LRR_4
Motif
Other DBs
NCBI-GeneID:
127510586
NCBI-ProteinID:
XP_051746220
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All DBs
Position
4:complement(21440062..21448926)
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AA seq
1021 aa
AA seq
DB search
MSFHVEREDEDTAAKMNSLLPGSSCVFMKSNFIDAVTSDPSISKRKRQRSESPELSIVSL
KSNTSMMQPIGLSDGPVTSDPPRTKIHMLSRSVPSSTSHYQTHIRQYKTEAVQQTGDLQR
VKNQHKTSMKNKYERFFEGIKLQENQTFLNRIYTQLYIIEGEREGVNEEHEVLQMEKTAR
TQHSQDTPIYCNDIFKASPEPGCEVKDKIKTVLTKGIAGIGKTVSVQKFILDWAEGKANQ
DVDFMFVFPFRELNLIGDDQYSLHRLLLDFHPELQDLDSKIYEECKVVFILDGLDESRIT
LFSDTQKLSDVTETSSVGVLMSNLMKGELLPSALIWITSRPAAVNQIPSKYINRLTEIDG
FNEPQKEEYFRKRISDERQASRIISHIRRARSLHIMCHIPVFCWISATVLQKLLKEDLSA
EIPQTLTEMYIHFLLFQIKMRNQKYEERDPEKLLQSNREMIVKLGEVAFKQLMKGNVMFY
EDDLRESGIDVTDASVYSGICTEIFKEESVIHQRKVYSFIHLSVQEFLAAFYLFYLYVMK
NVDTLQFFDVVHNLHREIVNKALKSENGHLDLFLRFLLGISLESNQRLLQDLLTHTENSS
ESIERTTQYIKEKIKNGHGLSTERSINLFLCLLEVKDQTLSREIQEFVKSDKHSEKKLSP
AHCSTIAYMLQMSEEVLDELDLKKYNTSDEGRRRLIPAVINCTKALLSGCNLTAHDCEIV
SLALQSSNCVLKELDLSNNDLQDLGVNLLSDGLRSPNCQLEILRLSGCMVTEEGCGYVSS
ALSSNPSHLRELDLSYNHPGQTGVQQLNDKLDHPQYKLEILNLDYGGHFRITPGLRKYAC
NLTLHPNTANAHLILSENRNATCMKESQPYADHPERFENYEQVLCRESLTGRCYWEVELR
GWGHIAVTYKGIRRKGGIDCRFGLNDKSWNLYCCDTIYTSWHNNKANSTKIPPSSSISNR
VGVYLDWSAGILSFYSVSDTHTLTHLHTFNTSFTEPLYAGFGFYNDSAVFVSDLTTSFEE
P
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgagtttccatgtcgagagagaagatgaggacactgcagctaaaatgaattctctgctt
cctggatcaagctgtgtgtttatgaaaagtaatttcatagatgcagtgacctctgacccc
agtatcagcaagaggaagagacaaagatcagagtctccagaactcagcattgtgtctctg
aagagtaacacatccatgatgcaacccattggactcagtgatggacctgtgacctctgac
ccccccaggacgaagatacatatgctgagcaggtctgtgccatcatctacatctcactat
cagactcacatcaggcagtacaaaactgaagcagtccagcagactggagacctgcagaga
gtcaaaaaccagcacaaaaccagcatgaagaataagtatgagagattttttgagggaatt
aaactccaagagaatcaaaccttcctgaacaggatctacacacagctctacatcatagag
ggagagagagaaggagtgaatgaagaacatgaggttttacagatggagaaaacagccaga
acacaacactcacaagacactccaatctactgcaatgacatatttaaagcctcacctgaa
ccaggatgtgaggtgaaagacaaaatcaagactgttcttactaaaggcattgctggaatc
ggaaaaactgtctctgtgcagaagttcattctggactgggccgagggaaaagccaatcag
gatgtagatttcatgtttgtgtttccatttcgagagctgaacttgattggagatgatcag
tacagtcttcacagacttctgctggactttcatcctgaacttcaagatctggactcaaag
atttatgaggagtgtaaagttgtgttcatcttggatggtctggatgaaagcagaatcaca
ctgttttcagacactcagaaactttctgatgttactgagacttcatcggtgggtgtgttg
atgtcaaacctcatgaaaggagagctgcttccctctgctctaatctggatcacctccaga
cctgcagcagtcaatcagatcccctccaaatacatcaaccgtctaacagaaattgatgga
ttcaatgaacctcagaaggaggaatatttcaggaagagaatcagtgatgagcgtcaagcc
agcagaatcatctcacacatcagaagagcaagaagcctccacatcatgtgccacataccc
gtcttttgctggatctcagccaccgtgcttcagaagctcctgaaagaagatctgagtgca
gaaatccctcaaactctgactgaaatgtacatccacttcctgctgtttcagatcaaaatg
aggaatcagaagtatgaagagagagatccagagaaactcttgcagtccaacagagaaatg
attgtgaaacttggtgaagtggctttcaaacagcttatgaagggcaatgtgatgttctat
gaggacgacctgagagagagcggcatagatgtcactgacgcctcagtgtattctgggatt
tgcactgagatctttaaggaggaatctgtgattcatcagaggaaagtctacagcttcatt
catctaagcgttcaggagtttcttgctgctttctatttgttttacctttatgtaatgaaa
aatgttgacacattgcagtttttcgatgtagtgcataatctgcatagagaaatagtcaat
aaagcccttaagagtgagaatggacacctggatctgttcctgcggttcctgcttggcatc
tcactggagtccaatcagagactcttacaggatctactgacacacacagagaacagctca
gagagcatcgagagaaccacacagtacattaaagagaagatcaaaaatggacatggactc
tccactgaaagatccatcaatctgttcctctgtctgctggaagtcaaagatcagactctg
tccagagagattcaggagtttgtgaaatcagacaaacactcagagaagaaactctctcct
gctcactgctcaacaatcgcctacatgcttcagatgtcagaggaagtgctggatgagctg
gacctcaagaaatacaacacatcagatgaaggtagaagaagacttataccagctgtgatc
aactgcacaaaagcccttctttctggctgtaatcttactgcccatgattgtgaaattgtg
tcattagctctacaatcctcaaactgtgtcctgaaagagctggacctgagtaacaatgac
ctgcaggatttaggagtgaatttgctctctgatggactgaggagtccaaactgtcagctg
gagatactgagattgtctggctgtatggtgacagaggaaggctgtggttatgtgtcttca
gctctgagttcaaacccctcacacctgagagagctggatctgagctacaatcacccagga
caaacaggagtccagcaacttaacgacaaactggatcatccacagtataaactggagata
ctcaatttggattatggtggacatttcaggatcacaccaggactgagaaaatatgcctgt
aatctcacactgcatccaaacacagcaaacgctcatctcatcctgtctgagaacagaaat
gcaacatgtatgaaagagtcacagccgtatgctgatcatccagagagatttgagaactat
gagcaggttctgtgtcgagagagtctgactggacgctgttactgggaggttgaattgaga
ggctggggtcatatagcagtgacatataaaggaatcaggagaaaaggtgggattgactgt
cggtttggactcaatgacaagtcctggaatctttactgttgtgatacaatttacacttcc
tggcacaataataaggctaacagcacaaagattcctccctcttcatctatatctaataga
gtaggagtgtatctggactggtcagccggtattctgtccttctacagcgtctctgacaca
catacactcacacacttacacacattcaacacctcattcactgaacccctctatgctgga
tttggtttttacaatgattccgctgtctttgtgtcagatttaacaacctcttttgaggaa
ccatag
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