Ctenopharyngodon idella (grass carp): 127510775
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Entry
127510775 CDS
T08802
Name
(RefSeq) low-density lipoprotein receptor-related protein 6
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04150
mTOR signaling pathway
cide04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
127510775
04150 mTOR signaling pathway
127510775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127510775
Membrane trafficking [BR:
cide04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
127510775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
FXa_inhibition
Ldl_recept_a
Vgb_lyase
DUF5050
SGL
EGF_LRP2
TMEM127
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
127510775
NCBI-ProteinID:
XP_051746747
LinkDB
All DBs
Position
4:17462768..17481608
Genome browser
AA seq
1615 aa
AA seq
DB search
MCAVLQSLLLCTLCLQIRGLPLLLYANRRDLRLVDAAHGRGNATVVIGGLEDAAAVDYVY
AQGLIYWSDVSEESIKRTLFNGSTPSGIQTTVVSNLASPDGLACDWMGNKLYWTDSETNR
IEVAELDGTYRKVLFWQDLDQPRAIALDPGRGFMYWTDWGEIPKIERAGMDGTRRSVIID
SEIYWPNGLTLDYGQQKLYWADAKFNFIHRSNLDGSGREVVVKGSLPHPFALTLYEDTLF
WTDWNTHSIHSCHKHTGQNSREIHSDIFSPMDIHVFSQKRQPLDVTSPCTLKNGGCSHLC
LLSPVKPYYQCACPTGVRLLDDNKSCRDGPTQLLLLARRTDLRRISLDTPDFTDIVLQAD
DIRHAIAIDYDPVDGHIYWTDDEVRAIRRSYLDGSDAQFVVTSQVNHPDGIAVDWIARNL
YWTDTGTDRIEVTRLNGTMRKILISEELDEPRAIVLDPVAGYMYWTDWGEVPKIERAALD
GTERLVLVNTSLGWPNGLALDYTERKIYWGDAKTDVIEVMEMDGSGRRVLVDDNLPHIFG
FTLLGDYIYWTDWQRRSIERLHKRSLEREVIIDQLPDLMGIKATYVKQTFGVNPCALANG
GCSHLCLYKPQGVSCACPIGLELMADLSTCIVPEAFLLFSRHTDIRRISLETNNNNVAIP
LTGVKEASALDFDVTDNRIYWTDITLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGK
NLYWADTGTNRIEVAKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGRPKIDRAA
MDGSGRITLVPNVGRANGLTIDYAERRLYWTDLDTTLIESSNMLGLEREVIADDLPHPFG
LTQYQDYIYWTDWSQRSIERANKTSGQNRTVIQGHLDYVMDILVFHSSRQGGWNACASTN
GHCSHLCLAVPVSSFVCGCPAHYSLNYDNKTCSAPTSFLLFSQKTAINRMVIDELQSPDI
ILPIHSLRNVRSIDYDPLDRHLYWIDSKQNVIRRAQEDGNQSVTVVSGGPSLGLQPYDLS
IDVYSRFIYWTSEVTNVINVTRTDGSRVGVVLRGEHDKPRAIVVNPERGYMYFTNLQDRS
PKIERAALDGTEREVLFFSNLGKPVALAVDNELGKLFWVDMDLRRIESSDLSGANRIVIE
DSNILQPVGLTVFGNYLYWIDRQQQMIERIDKVTREGRTKIQARIASLTDIHAVHELDME
EYNKHPCTSDNGGCSHICIVKGDGTTRCSCPVHLVLLQDELSCGEPPTCSPEQFSCVSGE
VDCIPQAWRCDGFAECDDSSDERDCPVCSDEQFQCDSKQCVDVSLRCNGEINCQDRSDES
NCEVLCPVDQFACANGQCIGRHKKCDHNMDCTDNSDEIGCYATEEPSFPPTNTIGSIVGV
VMVLFVVGAVYFVCQRVLCPQMKDDSETMTNDFVVHGSSSVPLGYVPHPGSLSGSLPGMS
RGKSVIGSLSIMGGSSGPPYDRAHVTGASSSSSSSTKGTYFPPILNPPPSPATVRSQYTM
EFGYSSNSPSTHRSYSYRPYSYRHFAPPTTPCSTDVCDSDYTPGRRAPHTSTAAVKGYTS
DLNYDSEPLPPPPTPRSQYLSAEENCESCPPSPYTERSYSHHLYPPPPSPCTDSS
NT seq
4848 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgccgtactacagagtctcttactgtgtactttgtgtttgcagatacggggcctg
ccgctcctcctgtatgcgaaccggcgggacctgcgactggtggacgcggctcacggtcgg
gggaacgccaccgtggtgatcggcggtctggaggacgcggcggcggtggattacgtttac
gcacagggactgatttactggagcgacgtgagcgaggagtccatcaaacggacgctgttt
aacggctcgacgcccagcgggattcagaccaccgtcgtgtccaatctggcctctccggac
ggcttggcctgcgactggatggggaataagctctactggactgattcggagaccaatcgg
atagaagtggccgaactggacgggacgtaccggaaagttttgttctggcaggatctggac
cagccgagagccatcgctctggatccgggccgagggttcatgtactggacggactggggc
gagatcccgaagatcgagcgcgccgggatggacgggactcgtcgctccgtgatcatcgac
tctgagatctactggcccaacggactgacgctcgactacggccagcagaagctgtactgg
gccgacgccaagttcaacttcatccaccgctccaacctggacggctccggcagggaggtg
gtggtgaagggctcgctgccgcacccgttcgcgctgacgctgtacgaggacacgctcttc
tggaccgactggaacacgcactccattcactcctgccacaaacacacgggacagaacagc
cgcgagatccattccgacatcttctcacccatggacatacacgtcttcagccagaagcgc
caaccgctcgacgtgacgagtccctgcacgctaaagaacggcggatgttcccatctgtgt
ctgctgtctccggtcaaaccgtattaccagtgcgcctgtccgacgggtgtccgactgctg
gacgacaacaagagctgcagagatggtcccactcagctgctgcttctggcccgacgcaca
gacctgcggcggatatctctggacactcctgacttcaccgacatcgtgctgcaggccgac
gacatccgacacgccatcgccatcgactacgacccggtggacggacacatctactggacg
gacgacgaggtgcgggccatacgccggtcctacctggacggcagtgatgcacagttcgtg
gtgacctcgcaggtgaaccacccggacgggatcgcggtggactggatcgcacgaaacctg
tactggaccgacaccggcacggaccgaatcgaggtgacccggctgaacggcaccatgagg
aagatcctgatatcggaggagctggacgagcccagagccatcgtgctggaccccgtcgcg
gggtacatgtactggacggactggggtgaagtgccgaagatcgagcgcgcggctctggac
gggacggagcggctggtgctggtcaacacgtctctggggtggccgaacggactggcgctc
gactacacggagagaaagatctactggggcgacgccaagactgacgtcatcgaggtgatg
gagatggacgggtcaggccggcgggttctggtggacgataacctccctcacatctttggc
ttcacgctgctgggcgactatatctactggacggactggcagcggcggagcatcgagcgc
ctgcacaagcgcagcctggagcgcgaggtcatcatcgaccagctgcccgacctcatgggc
atcaaggccacatacgtcaagcagaccttcggtgtgaacccgtgtgcgctggctaacggc
ggctgcagtcacctgtgtctgtataaacctcagggcgtgtcgtgcgcgtgtcccatcggt
ctggagctcatggccgatctgagcacctgcatcgtccccgaggccttcctgctgttctca
cgccacaccgacatccgccgcatctcgctggagaccaacaacaacaacgtggccatcccg
ctcaccggcgtcaaggaggcctcggcgctcgacttcgacgtgaccgacaaccggatctac
tggacggacatcacgctgaagaccatcagtcgggcgttcatgaacggcagcgctctggag
cacgtggtggagttcggtctggactatcccgagggaatggctgtggactggctgggcaag
aacctgtactgggccgatacgggaaccaaccgcatcgaggtggccaaactggacgggcag
caccgacaggttctggtgtggaaggatctggacagcccgcgagcgctggcgctggacccg
gccgagggcttcatgtactggaccgagtggggtggacggccgaagattgaccgcgctgcc
atggacggatctggacgcatcactctggtgccgaacgttggccgtgcgaatggactgacc
atcgactacgctgagcgacggctgtactggacggacctggacaccacactgatcgagtcc
tccaacatgctgggtctggagcgcgaggtgatcgctgatgacctgccgcacccgttcggc
ctcacgcagtaccaggactacatctactggaccgactggagccagcgcagcatcgaacgc
gccaacaagaccagtgggcagaaccgcacggtcatacaggggcacctggactatgtcatg
gacatcctggtgtttcactcgtccagacagggcggctggaacgcctgcgcctccaccaat
ggccactgctctcacctgtgtctggccgttcccgtcagcagcttcgtgtgcggctgtccg
gcgcattactcgctcaactacgacaacaagacctgcagcgcgcccacgtccttcctgctg
ttcagtcagaagacggccatcaaccgcatggtcatcgacgagctgcagagtcctgacatc
atcctgcccatccacagcctcaggaacgtgcgctccatcgactacgacccgctcgaccgc
cacctgtactggatcgactcaaagcagaacgtcatccgccgcgcgcaggaggatggcaac
cagagcgtgacggtggtgtccggcggcccgagcctcggcctgcagccctatgacctcagc
atcgacgtctacagccgcttcatctactggaccagcgaggtgaccaacgtcatcaacgtc
acacgcaccgacggctcgagggtcggcgtggtgctgcgcggagaacacgacaaaccccgc
gccatcgtggtcaatcctgagcgagggtacatgtacttcacgaatctgcaggatcgctcg
ccgaagatcgaacgcgccgctctggacgggacggagcgcgaggttctgttcttcagcaat
ctgggaaagccggtcgctctggccgtcgacaacgagctgggaaaactcttctgggtcgac
atggacctgcggcgcatcgagagcagcgacctgtccggagccaatcggatcgtgatcgag
gactccaacatcctacagccggtgggtctgacggtgttcgggaattacctgtactggatc
gaccggcagcagcagatgatcgagcgcatcgataaggtcacgcgtgagggacgcaccaag
atccaggcgcgcatcgcctctctgaccgacatccacgccgtccacgagctggacatggag
gagtacaataaacacccctgcacgtctgataacggcggctgctcgcacatctgcatcgtg
aaaggagacggaaccacgcgctgttcgtgtcccgttcatctggtgctgctgcaggacgag
ctctcctgtggagagccgcccacctgttctcctgagcagttctcctgcgtgtccggcgaa
gtcgactgcatcccgcaggcctggcgctgcgacggcttcgccgagtgtgacgacagcagc
gacgagcgcgactgtcccgtctgctccgacgagcagttccagtgcgacagcaagcagtgc
gtggacgtgtcgctgcgctgcaacggagaaatcaactgccaggatcgctcggatgagagc
aattgtgaagttctctgtcccgtggatcagttcgcctgcgccaatggccagtgcattgga
cgacacaagaaatgtgaccacaacatggactgcacggacaactctgacgagatcggctgc
tatgcgacagaagagccttcctttcctcccaccaacaccatcggctccatcgtgggcgtc
gtgatggtgttgttcgtggtgggcgccgtgtacttcgtgtgtcagcgcgtcctgtgtcct
cagatgaaggacgacagcgagaccatgaccaatgacttcgtggtccacggttcctcgtcc
gtgccgctgggatacgtgccgcaccccggctctctgagcggctcactgccaggcatgtct
cgggggaaatctgtcatcggctcactgagcatcatgggcggcagcagcgggccgccatac
gaccgcgctcatgtgaccggagcctcgtccagcagctcctccagcaccaagggcacgtac
ttccctccgatcctgaatccccctccgtctccggccaccgtgaggtcacagtacaccatg
gagttcggatactcgtccaacagcccatcgacgcaccggtcgtacagctacaggccgtac
agttaccgtcacttcgcccctccgacgacgccgtgcagcacagacgtgtgcgacagcgac
tacacgccgggccgccgggctccgcacacgtccaccgccgccgtcaagggctacaccagc
gacctgaactacgactcggagccgctgccgccgccgcccaccccacgcagccagtacctg
tcggcggaggagaactgcgagagctgcccgccgtcgccctacaccgaacgcagctactcg
caccacctgtacccgcccccgccctcgccctgcacggactcgtcctga
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