Ctenopharyngodon idella (grass carp): 127510816
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Entry
127510816 CDS
T08802
Name
(RefSeq) lumican
KO
K08122
lumican
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cide00535
]
127510816
Proteoglycans [BR:
cide00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class II
127510816
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRRNT
LRR_6
LRR_14
LRR_9
LRR_NXF1-5
DUF7409
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
127510816
NCBI-ProteinID:
XP_051746818
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Position
4:8140415..8143633
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AA seq
344 aa
AA seq
DB search
MFALGSFLLAGLVCQSLGQYDYYEEYYMPSAPLEGVSSPTCAQECECPISFPTAMYCNER
NLKFIPIVPSGIKYLYLQNNLIEEIKAGVFDNVTDLRWLVLDHNKITSDKIQAGTIDKLA
SLEKLHFSHNQLTKPPGPLSKSMDELKLIGNELSSFPASTLSGMENLTTLHLSKNKLTTE
SITGAFKGLKSLVLLDVSENKLKKLPSGVPASLLMLYADNNEIDSIPGGYLAKLPALQYL
RVSHNKLVDSGIPAGVFNVSSLLELDLSFNKLKTIPEISELLEHLYLQVNEISKFDLTNI
CKFSSPVNYSRLRTLRLDGNNLTHNSMPDDTANCLRQASEIIFD
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgtttgctctgggctccttcctattggctggacttgtatgtcagagtttgggtcagtac
gattactatgaagaatactacatgccctccgcaccactggagggagtatcatctcccact
tgcgcccaggagtgcgaatgtcccatcagcttccccacagctatgtactgcaacgagcgc
aatttgaagttcattcccattgtgccgagcggaatcaaatacctctacctacagaacaac
cttattgaggagatcaaggctggcgtgttcgataacgtcactgaccttcgctggctcgtc
cttgaccacaacaaaatcaccagcgacaagatccaggctggtaccattgataaactggcc
agcttagagaagctccacttcagccataaccagctgaccaaaccccctggtcctctttcg
aagtctatggatgagttgaagctgattggcaacgagctaagctcgttccctgctagcacc
ttgtctgggatggaaaacctgaccacccttcacctgtccaagaacaagctgactactgag
agcatcacaggtgccttcaaaggcctgaagtccctcgttctgctggacgtgagcgagaac
aagctcaagaaacttccctcaggagttccagcttcgcttttgatgctctatgccgacaat
aacgaaatcgatagcatccctggtggctacctggccaagctcccagccctgcagtacctg
cgtgtctcccacaacaagctggtggactctggaatccctgcaggtgtgttcaacgtgtcc
tcactccttgagctcgacctgtctttcaacaagctgaagaccattccagagatcagcgaa
ttactcgagcacctgtacctgcaagtcaacgagataagcaagtttgacctgacgaatatc
tgcaagttcagctccccggtcaactactctagactgaggaccctgcgcttggatggaaac
aacctcacgcacaacagtatgccagatgacacggctaactgcctacgccaggcctcagag
atcatctttgattag
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integrated database retrieval system
