Ctenopharyngodon idella (grass carp): 127510927
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Entry
127510927 CDS
T08802
Name
(RefSeq) AT-rich interactive domain-containing protein 2 isoform X1
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
127510927
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127510927
03021 Transcription machinery [BR:
cide03021
]
127510927
03036 Chromosome and associated proteins [BR:
cide03036
]
127510927
Transcription factors [BR:
cide03000
]
Eukaryotic type
Helix-turn-helix
ARID
127510927
Transcription machinery [BR:
cide03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
127510927
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
127510927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
FOXP-CC
TSTD2_N
Motif
Other DBs
NCBI-GeneID:
127510927
NCBI-ProteinID:
XP_051747057
LinkDB
All DBs
Position
4:16354232..16375333
Genome browser
AA seq
1594 aa
AA seq
DB search
MANSTGKNLPEQRRKGQAFLDELRQFHHSRGSPFKKVPVVGGKELDLGALYVRVVSLGGF
AKVSDKNQWAELGEDFNFPRSCSNAAFVLKQYYLRYLEKYEKVHHFGEEDEEEQPGNPKH
LLPIGAIPTSYNYQQHTVSDYLRQSYGLSTDFIPPSDYNKLVLSLLSGLPNEVDFAINVC
TLLSNESKHAMQLEKEPKLVTLLLAHAGVFDDSLGSFSAVFGTDWQEKTSRDFVRFWKDV
IEDNEVKDLISDRSCTPQNGLETRDVCTSLFHPARNIGIGDVEGQRVLQVAMILRNLSFE
EANIKLLAANRTCLRFLLLCAHCTFIQLRQLGLDTLGNVAGELQLDPVDFRTTHLMFHTI
TKCLLSRDRFLKMRAMEILGNLSKVEDNGVLICEYVDQESYREVIALLTLPDIMLVISAL
EVLYQLAELGEVTCSKISSVERSIDLLVRLVSVDLHTFGPDALTAVKLIEHQASSSQVSE
VRPQLVEHVPPPTQGTPGAVNRAPVQSTPPPGIVEVDGEKFTTQWLNAHFEVHPDGSVSR
SEMYSEYLATCSKMARGGVLTSNNFYKCLRTLFPNHTVKRVEDTRLSGQAQIHVVGVRKR
PIPLPVQLYYQQQASPAPVPKHEAPSETPQTQSALLPGVGGQLVRAPAPSLTAGQAAPQV
AFTMHGTSHANAPSAPAPAPTVPRLPMNPPGQAALPACPPATAPVPIRPNDILKTAMIQS
SIPTASTAPAVPNHSGSPTQQPLLHHAPVTLIQQGPPPQGHVFTGRVQGVCPSVAQQRLQ
APSQEAVVLAPPQYVSAPCTSLMAGGQVVTVAGVTSTRVAFQNIAPKPAPQAQSPQPQQQ
TQQQSLVIVSPNQQPNTAFAPAIHQIVLTNPNPQTIQPQPTASPASPNAPVPNPAPLQPA
QPHTVSQMLSVKRQFQQTPPPPPPPAQPTSTESSLIKQLLLPKRGPSTPGGKLILPAPQV
PAPASTRAPSPQVVYQVTNSGSVPPQPQLNVQLMQSPGAVPISILPGQIISTSTPGTLLQ
AAPSNQVTFTVVPNSGFPGQGAQTPPTIGLQLTPPLPIAGATPIPPFRGDKIICQKEEEA
KDATGLHVHERKIEVMENNSVADGSAKASNGESAEVDGPKLLNGRKFDSSLPPYHSGNNQ
AEATQAPNGPATQGSSEGPGKQTPCDPKKLMVNGVCDFERSDAGSHPSKNIPNHKASKHM
GNGEVLSPQKAHVAFGLTDSLAAPQQDTAKAEQAERLANGPSHGAEISNGPNSETLGVRQ
QHPPHNHSPPPPVSEPPPANGTTESRSLKRPLEDGDRGNSGIPTKMGVRIVTISDPNNAG
NSATMVAVPAGADPSTVAKVAIENAAQQRPSVPSPLPETNAQQPVSVQTPPPVDQAAQGA
NQSSPAPALSPDQARKPGQNFKCLWQACKRWFDTPSQVFYHAATHHGSKDVYPGQCQWEG
CEPFPRQRLSFITHLQDKHCSREALIAALKLEEQTQGSNPNTSKSPPAAVNSPPPPPRPQ
KALVNHPSAALMALRRGSRNLVFRDFTDDKEGPMTKHIRLTAALTLKNIAKYSDCGRKLV
RRHENHLCVLALSTMEVSTTLAKCLYELTRSLQA
NT seq
4785 nt
NT seq
+upstream
nt +downstream
nt
atggcgaactcgacggggaaaaacctccccgagcagcggaggaaaggacaggctttcctg
gacgagctgcggcagtttcaccacagcagaggatcaccgtttaaaaaggttcccgtggtg
ggtgggaaggagctggacctgggtgctctctatgtgagagtggtgtctttagggggcttc
gcgaaggtgtccgacaagaaccagtgggccgaactgggcgaggatttcaatttccccagg
agttgctcgaatgctgcttttgttttgaaacagtactaccttcgctatttagagaagtat
gaaaaggtgcatcattttggagaggaagatgaagaggagcagccgggaaatcctaaacat
ttgcttccgattggtgcaatacccacgtcatacaactaccagcaacacactgtatcagac
tatctccgccaaagctatgggctgtcgacggatttcatccctccatccgattacaacaaa
ctggtgctgtctctcctgtctgggctcccgaacgaggtggactttgccattaacgtgtgc
acgctgctatccaacgagagcaagcatgccatgcagctggaaaaagagcccaaactcgtc
acactgctgctggcacacgcgggagtcttcgacgactcattaggcagcttttctgctgta
tttgggacagactggcaggagaaaacgtcacgagactttgtgaggttttggaaagatgtc
attgaagacaatgaagtcaaagatctcatctcagacaggagctgcacacctcaaaatgga
ttggagacgagagacgtctgcacttctctcttccacccggcacgtaacataggcattgga
gatgtagagggccagcgggtgttgcaggtggcaatgattctgaggaacttgtccttcgag
gaggccaacatcaaactcctggcagctaatcgcacatgtctgcgcttcctcttgctgtgt
gcgcactgcaccttcatccagctacggcagctgggtcttgacacactcggcaacgttgct
ggagagcttcagttggatccagttgatttccgaacgacgcatctgatgtttcacaccatc
acgaaatgtttgttgtcacgggatcgttttctcaaaatgagggccatggaaatcttggga
aacctgagcaaagtggaggataacggcgtcctgatctgcgagtatgtggatcaggagtcg
tacagagaagtcattgccctcctgacgctgccagacatcatgctggtcatctcggctctg
gaggttctgtaccagctggctgagctcggggaggtcacatgctcgaaaatctcctctgtg
gagagaagcatagatcttctcgtacggttggtgtcagtggacctgcacacgttcggaccc
gacgccctgacggcagtaaaactcatcgagcatcaggcctccagctctcaggtctcagag
gttcgaccgcagctggtagagcacgttccccctccaacgcaaggcactcctggcgctgtg
aacagggcacctgtgcagtctacgcctccgcctgggattgtggaagtagatggagagaag
ttcacaactcagtggctcaatgctcattttgaggttcatccagatggttcggtctctcgc
tcagagatgtactctgagtatctggcgacctgcagcaagatggcgcggggtggcgtgctg
acatccaacaacttctacaaatgcctgaggacgctgtttcctaatcacacggtgaagcgt
gttgaggacacacggctaagtgggcaggctcaaatacatgtggttggtgtgcggaagagg
ccgattcctcttcctgtccagctttattatcagcagcaggccagtcctgcaccagttcca
aaacacgaagccccctcagaaacccctcagacccagtcagcgctgctccctggtgtggga
gggcagcttgtccgggctccagcaccaagccttactgccggccaggcagcaccacaggtg
gccttcaccatgcacggaacgtcacacgccaacgctcccagtgctcctgcgccagccccg
actgttccacgactcccaatgaacccaccaggacaagctgcacttcccgcttgccctcca
gccaccgccccagttcccatacgacccaatgacatcctcaaaactgccatgatccagagc
tccatccccacggcatctactgcacctgcagttcccaaccacagcggctcgcctacccag
cagcccttgctccatcatgcccctgttacactgatccagcaggggccgccgccccaagga
cacgtatttacaggtcgagtgcaaggagtttgtccttcggtggcccagcagcgcttgcaa
gccccttcccaagaggccgtggtgcttgcaccgcctcaatatgtgagtgcgccatgcact
tcgctaatggcaggagggcaggttgtgaccgttgcaggcgtgactagcactcgtgttgca
tttcagaacatcgcccccaaaccagcacctcaagcgcagtcgccacaacctcaacagcaa
acgcaacagcaaagcctagtcattgtcagtcccaatcaacaacccaacaccgcattcgcc
ccagccattcatcaaatcgtactaaccaaccccaatcctcagaccatccagccgcagccc
acggcgtctcccgcttctccaaacgcaccggtccctaaccctgccccattgcagccggcc
cagccacacacagtcagccagatgctgtctgtcaagcggcaatttcagcagactccgccc
cctcctccaccccccgcccaacctacctctacagaatccagtctgatcaaacaattattg
cttccgaaacgtggtccttccacccctggtggaaaactcatactccccgctccgcaagtt
cccgctcctgcgagcaccagggcgcccagcccgcaagtcgtataccaggtgaccaacagc
ggttcggtgccacctcaaccgcagttgaacgtgcaacttatgcagagtcctggtgccgtt
cccatctccatcctaccaggtcagatcatttccacctccacccctggcaccctcctgcag
gcggcgcccagcaaccaagttaccttcactgttgtgccaaactctggcttccccggccag
ggagcgcagaccccgcccacaatcggcctgcagttgactccgcctctgccgatcgcggga
gccacgcccattccacctttccgaggtgacaaaatcatctgccaaaaggaggaggaggcc
aaggacgccacgggactacatgtgcacgagcgcaagatcgaggtcatggagaacaactct
gtcgcagatggttcggccaaagccagcaacggggaatcggcagaggtggacggaccgaag
ctgctcaatgggaggaaattcgactcaagtctacctccataccactcagggaacaaccaa
gcagaggctacacaggcgccgaacggccctgcgacacagggcagcagcgaaggccctgga
aagcagacgccctgcgaccctaaaaagctaatggtgaacggggtgtgtgactttgagcga
tcggacgctggttcccatccgagcaaaaacattccaaatcataaggcttccaaacacatg
gggaacggtgaggtgttgtcgcctcagaaagcgcacgtggcttttggactcacggactct
cttgctgctcctcagcaggacactgccaaagcagagcaggcagaacgcctggccaacggg
cccagccacggcgctgagatctccaacggcccaaactcagagacactgggcgtgaggcaa
cagcacccacctcataaccactccccacctccacccgtttcagagccgcctcccgctaac
ggcaccacggagagccggtcgctgaagagaccgctggaggacggggacagaggtaactcc
ggaatccccacaaaaatgggtgtacggatagtgaccatcagcgaccccaacaatgctggc
aacagcgccaccatggtggccgtgccggcgggcgcagacccaagcacagtagcaaaagta
gcaatagagaatgcagcacagcagagaccaagtgtgccctcgccgcttcctgaaaccaat
gctcagcagcctgtgtcagttcagactccgcctccagtggatcaggctgcacaaggagcc
aatcagagttctccagcacccgccctctctccagatcaagcacgtaaacctggacagaac
tttaaatgtctgtggcaagcatgcaaacggtggtttgacacaccgtcacaggtgttttac
cacgcagctacccatcatggcagtaaagacgtgtacccagggcagtgccagtgggagggc
tgtgaaccttttcctcgacagagactatccttcatcacacacctgcaggataagcactgt
tcgagggaagcgctcatagctgcactcaaactggaggagcaaacacaaggcagcaacccc
aacacttccaagtctcctccagcggcggtcaacagtcctccgcctcctcccagaccacag
aaagcgcttgtcaaccaccccagtgcagctctgatggctttacgccggggctcgaggaac
cttgtgttcagggacttcacagatgataaagagggaccaatgaccaaacacattagacta
actgctgccttaacgttaaagaacatcgccaagtactcggattgtggacggaagctggtg
cggcggcatgagaaccatctgtgtgtgttggcgctgagcactatggaggtctccaccacg
ctcgcgaaatgcctttacgaactcacgcgctccctgcaggcctga
DBGET
integrated database retrieval system
