Ctenopharyngodon idella (grass carp): 127510933
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Entry
127510933 CDS
T08802
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
127510933
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cide02000
]
127510933
Transporters [BR:
cide02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
127510933
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GFIT
Motif
Pfam:
SNF
RhodobacterPufX
Motif
Other DBs
NCBI-GeneID:
127510933
NCBI-ProteinID:
XP_051747068
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Position
4:771341..797400
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AA seq
599 aa
AA seq
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MGKTGQSTVDLNSPSDVKQAVPFEDLPHNSVPVEEEKENKVPDRGAWKGKFDFLLSCVGY
AIGLGNVWRFPYLCGKNGGGAFLIPYFTTLVFAGIPLFLLETALGQYTSVGGLGVWKLIP
MMKGVGLAAVVLSFWLNIYYIIIIAWALYYLFSSFKAELPWQTCDNPWNTDRCFSNYSLL
DTTNLTSAVTEFWERNMHQLTNGLEEPGELRWPLVGTLALSWILVYFSIWKGVEWTGKVV
YFSATYPYFMLFILFFRGVTLPGAIDGVRFYVTPDFNKLLKSEVWLDAATQIFFSYGLGL
GSLIALGSYNSFNNNVYKDSIIVCCINSCTSMFAGIVIFSIVGFMSHITKRPIEELAASG
PGLAFLAYPQAVTQLPMSSLWAILFFSMLMMLGLDSQFCTVEGFITALMDEYPTVLRKRK
KLFILIVCIVSFIIGFSNITQGGLYVFKLFDYYSASGMCLLFLVFFETISISWFYGAEKF
YKNIEEMIGYRPCGFWKQCWIYFTPIICLGVFTFSAIEMTPLTLGKYVYPAWGQGIGWLM
SLSSMILIPGYIIYMFFTTKGSIRQRWHKMTKPTELKISDTNDLTQQSSQTGSMDEASV
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggggaagactggccagagcacggtggacctcaactcaccctcagacgtgaagcaggca
gtcccatttgaggaccttcctcacaacagtgttcccgtagaagaggagaaggagaataaa
gtaccagacagaggagcgtggaagggaaaatttgactttctgctgtcctgcgttggatac
gccattgggctgggaaatgtgtggaggttcccatatctttgcggaaagaatggtggagga
gcttttctcatcccctacttcactactctggtgtttgctggtatcccgctgtttctgcta
gagacggcattaggacagtacacatcagtaggggggttgggagtatggaaattaataccc
atgatgaaaggtgtgggtctggctgctgtggttttgtctttctggctcaacatttattac
atcatcatcattgcctgggctctctactacctcttcagctctttcaaagcagagttacca
tggcaaacttgtgataacccttggaacactgatcgttgcttttccaactacagtctgttg
gacaccaccaacctgaccagtgccgtcactgagttctgggagaggaacatgcaccagtta
acaaatggtttggaggaaccaggggaattgcgctggccgttggttggaactttggcgttg
tcttggattcttgtctatttctcaatctggaaaggtgtggagtggacggggaaggtggtg
tatttctcagccacatatccctacttcatgctctttattctgtttttccgtggagtcact
ctccctggggcgatagatggtgttcgcttttatgtcaccccggacttcaacaagctttta
aaatctgaggtgtggttagatgctgccactcagatcttcttctcttatggtctgggttta
ggttctctcattgctctgggcagttacaactccttcaacaacaatgtctacaaagattct
atcattgtgtgctgtataaactcctgcaccagtatgtttgcggggatcgtcatattttcc
attgtgggctttatgtcacacatcacaaagagacccattgaagaactggctgcgtcaggt
cctggtttggcatttctggcctatccacaagccgtcacacagcttcccatgtcttcactc
tgggctattctcttcttctcaatgctcatgatgctgggattggacagtcagttttgtaca
gtggaaggcttcataacagctctaatggatgaatatcccacagtcctgaggaagagaaag
aaactcttcatcctcattgtctgcattgtatccttcattatcggcttctctaacatcacc
cagggtggcttatacgtgttcaaattgtttgactactactcggccagtggaatgtgtctt
ctgttcttggtcttctttgagacaatctccatttcttggttttatggtgcagagaaattt
tataaaaatattgaagaaatgattggttatcggccttgtggcttttggaaacaatgctgg
atttactttactccaataatttgtttgggtgttttcacatttagtgccatagaaatgact
cctctgacattagggaagtatgtgtacccggcctggggacagggcatcggctggctaatg
tccctttcctccatgattctgatacccggatatatcatctatatgttcttcacgaccaaa
ggcagcatccgacagcgctggcacaagatgactaaaccaacagagcttaaaatctcggac
acaaatgatctcacacaacaatcctcacagacaggaagtatggatgaagcttcagtctga
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