Ctenopharyngodon idella (grass carp): 127510951
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Entry
127510951 CDS
T08802
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit beta-1b
KO
K05636
laminin, beta 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04510
Focal adhesion
cide04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127510951
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127510951
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_EGF
LAMININ_IV_B
Laminin_N
F5_F8_type_C
Alanine_zipper
Laminin_I
Motif
Other DBs
NCBI-GeneID:
127510951
NCBI-ProteinID:
XP_051747093
LinkDB
All DBs
Position
4:complement(1293234..1322374)
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AA seq
1771 aa
AA seq
DB search
MWTFQTTALTISIALHTLAQLPDHNDKCAEGSCYPSTGDLLIGRAHRLTASSTCGLNGPE
TFCIVSHLKENKCFECDSRRMYSEFTNPNSHTIENVVTTFTPNRLKTWWQSENGVENVTI
QLDLEAEFHFTHLIMTFKTFRPAAMLIDRSADFGRSWQVYRYYAFNCTESFPHIPLGPIK
KVDDVICDSRYSGIEPSKGGEVIFRVLDPAFKIPDPYNPHTQNLLKITNLRVRMEKLHTL
GDNLSDDREEVKKNYYYALYDMVVRGNCFCYGHASMCAPVGTEAGVEGMVHGHCVCNHHT
TGLNCEECEDFYQDLPWRPAVGRETNACKRCECNHHSSSCHFDMAVYLSSGNRSGGVCDD
CQHNTEGQWCESCKPFYYKHSHRDIRDPRICEPCDCDPRGSLNEGLCDSATDVLRDMIAG
QCRCKANVEGQRCDHCKKGHYGLSDDPLGCRPCSCNPLGTLQTGSPCDIQTGSCYCKRLV
TGRNCDQCVPQHWGLSSDMDGCRPCDCDIGGALNNDCSQETGQCACKEHMFGRRCDQVHS
GYYVATLDHYIYEAEDASFGLAVKVVQRPLPLDHKPTWTGTGFVNVPEGETLRFNIYNLP
RSMEYNLMIRYEPLLPDEWEQVVVKIERPRANYTTAHCTSTYNDEQFISFHPGSRYVVLP
SPVCLEKGQNYTVKISFPQYSSYSYHSSPHTLVDSIVLLPDVRDLELFSEGPQQQEDWEM
FKKYRCMERSQSIIKIPLTDICRDYIFSVSALLHNGALECRCDPRGSLSTVCDAIGGQCQ
CRPNVSGKNCDTCAPATYQFGPSGCRPCDCNPLGSQNLFCHPTTGQCLCVQGAYGRQCGN
CKPNHWGFPQCNPCSCNGNSEQCHPLTGECLNCRGHTTGRNCERCESGYHRNRLLGFREP
CLPCMCPNGPGSGMQFAESCYQNPPSLQMVCVCNSGYKGPKCEECASGYYGNPQVPGGRC
QPCQCNGNINMQDPESCDARTGACLNCLFHTDGNACQYCRRGYYGDARTQNCRSCMCHLV
GSSRHSCVDGLCECDRDSGQCPCLPGVEGQNCDRCAPNTWNINSGKGCQPCQCHPEHSYS
SSCDLLSGQCSCKPGFGGRTCEECRELFWGNPEVQCHACDCDPRGIATQQCNKLSGECVC
VEGVAGRRCDSCGRGYVGTFPDCEACHQCFREWDVNVGELTNYTQRLVNTVEEMVETGVA
SPYKDIVSSVEDETRQLREILEDDKVQQTLLHTQRMLQKANETASVLQKSLDRSETDLGK
VSADNQQAVENLESLNKEAQILQEISSDKQQQILNIKHSDPRGAGDGIREYYRESGVAEF
RVNQAVSEPGSAVKESAWLRKAAEAKLDSTEKEFNLKHQLHIQRLEKIGSELDSTDLSRL
SRQVCGGVSGLDGCGDCGGLGCVSKDGVSQCGGEGCETIVTQSQEALNKAKNLDQEVLHT
LKEVDKLNKMVSDARGRADEAKLSAQGVLLRANQSKARVEQTNEELRDLIQQIRDFLTNE
TDPKRIEEVADEVMKLSLPVSSGALKNMTSEIREHVARLTSVDDILTQTADKARTAERLL
QQAQAANERGTALKQTTDEVKETLEDIERAQTAASEKLEEVKSDMNQTKEQITAVQSKTE
VTEFKLSSSTGRFLDLEREVDELQQKTQETSRSADQTQKQTDNITEEIEHTAQDIDSIVR
PKYQLASGLIDQNAAGVIDARQKAELLRQEAKDILVDATNKLQRLRELERSFVINQHTLV
EKAQELEGLENEARDILQELSQKITIYSTCA
NT seq
5316 nt
NT seq
+upstream
nt +downstream
nt
atgtggactttccagactacagccctaacgatatccattgctttgcacaccctggcacaa
ttacctgatcacaatgacaagtgtgcagaggggagctgttacccctctacaggtgatttg
ctgatagggagagcacatcggcttacggcctcctccacctgtggactgaatggaccggag
acattctgcatcgtgagccatttgaaggaaaacaagtgttttgaatgcgattcccgacgg
atgtacagtgagttcactaaccccaacagccacaccattgagaatgtggtgacaaccttc
actcccaaccgcctgaaaacctggtggcagtctgagaacggagttgaaaatgtgactatt
cagctggatttggaggccgaattccacttcacacacctcatcatgacctttaagaccttt
cggcctgcagccatgctgattgaccgttctgcagattttgggcggagctggcaggtgtac
cgttactacgctttcaactgcactgaatcctttccgcacatccctctcgggccaatcaaa
aaagttgatgatgtcatttgtgacagccgctattctggcattgagccatcaaaagggggc
gaggtcatttttagggtacttgatcctgcatttaagattcctgacccttacaacccacat
actcagaacctactgaagatcacaaatctgcgtgtacgtatggaaaagttgcacactcta
ggtgataatctgtctgatgaccgagaagaggtgaaaaaaaattactattatgctctctat
gacatggtcgtccgtggcaactgtttctgctatggccacgcctccatgtgtgcaccagtc
ggcactgaggcaggggttgagggcatggttcacggtcattgcgtgtgtaatcaccacact
actggactcaactgtgaggagtgtgaggacttttaccaagatctgccctggagaccagca
gtgggccgagagacaaacgcatgcaagagatgtgagtgtaatcatcactcaagttcctgt
cactttgacatggcagtgtatctgtcatcgggaaacaggagtggaggagtatgtgatgac
tgtcagcacaacacagagggccaatggtgtgagagctgcaaacccttctactacaagcac
tctcacagagacatcagagaccccaggatctgcgagccctgtgactgtgacccacgtggt
tctctgaacgaaggcttgtgtgacagcgctacggatgttctaagagatatgattgctggc
caatgtcgctgcaaagctaatgtggagggacaacgatgtgaccactgtaaaaagggacac
tatggcctcagcgacgacccattaggctgtcgtccatgcagctgtaatcctctaggcaca
ctccaaacaggaagtccttgtgatattcagacaggaagctgttactgcaaacgccttgtg
actggacgaaattgcgaccagtgtgtgcctcagcactggggtctcagtagtgatatggac
ggctgtagaccatgtgactgtgacatcggcggggctttgaataatgattgttctcaggag
acagggcagtgtgcttgtaaggagcatatgtttggtaggcgttgtgaccaagtgcattct
gggtactacgttgcaacactggatcactacatttatgaagctgaagatgcttcctttgga
ctggcagtaaaagtggttcaaagaccattacctctggatcataaacccacctggacaggt
acaggatttgtcaacgtaccagagggtgaaacgctgagattcaacatttacaatctccca
cgatctatggaatacaacttaatgatccgctatgaaccactgttgccagatgaatgggag
caggttgtagtaaagatagagcgccccagagccaattacacaacagcacactgcacttct
acatacaatgatgaacagttcatctcatttcaccctggatccagatatgtagttctgcct
agtccagtgtgtttggagaagggtcagaactacacagtgaaaattagcttcccacagtac
tcatcatacagctatcactcttctcctcacacacttgttgattcaatagtgcttctgcca
gatgtgcgagacctggagctattttctgagggaccccagcagcaagaggactgggagatg
ttcaagaaatacagatgtatggaacggagccagagtattatcaaaatccccttgacagat
atttgcagagactacattttcagtgtgtcagcactactgcacaatggagctctggaatgt
aggtgtgacccacgtggttctctgagcacagtatgtgacgctatcggtgggcagtgtcag
tgtcgacccaatgtttcgggcaagaactgcgacacctgtgccccagccacataccagttt
ggaccctcgggatgtagaccgtgtgactgtaacccgctgggctctcagaaccttttctgc
caccccaccacgggccagtgtttatgtgtgcaaggggcatatggacgccagtgtggcaac
tgtaagcccaaccattggggcttccctcaatgcaacccctgctcctgtaacgggaacagc
gaacagtgccatccgcttacgggcgagtgtctgaactgcaggggtcacaccacaggccga
aactgtgagaggtgtgaaagtggttatcaccgtaacagactgctgggattcagagagccg
tgtctcccttgtatgtgccctaacggacctggaagcggaatgcagtttgctgagagctgt
taccaaaaccccccctctcttcaaatggtctgtgtctgcaactcaggctacaaaggacct
aagtgtgaggaatgtgcctctggttattatggtaaccctcaggtaccaggggggcggtgc
caaccatgtcagtgtaacggaaatattaacatgcaggaccctgaatcatgtgacgcccgc
accggtgcctgtctcaattgcctgtttcacactgatggcaatgcgtgccagtactgtaga
cgtggttattatggagatgcccgtacacagaactgcaggagttgtatgtgccatcttgtt
ggaagttccaggcacagctgtgttgatggcctgtgtgagtgtgacagggatagcgggcag
tgcccatgtctgcctggtgtggagggtcaaaactgtgaccgctgtgcccccaacacatgg
aacatcaacagtggcaaaggatgtcaaccttgccagtgccacccagaacactcgtacagt
tcctcctgcgacctgctgtcaggtcagtgttcctgtaagcctggttttggaggcaggaca
tgtgaggagtgcagagaactgttctggggcaatcctgaggtccaatgccatgcatgtgac
tgtgacccacgaggcattgccactcaacagtgtaataagctgtctggcgagtgtgtctgc
gtagagggcgtggccgggagaaggtgtgactcgtgtgggcgtggctatgtggggaccttt
cctgactgtgaggcgtgtcatcagtgtttccgcgaatgggatgttaatgtgggagagctg
accaattacacgcagaggctggtgaatacagtagaggaaatggtagagacgggcgtggct
tcaccctataaagacatcgtatcgagtgtggaggatgaaaccagacagctcagagagata
ctggaagatgacaaggttcaacaaactctcttacacacacagaggatgctgcagaaagcc
aatgagacagcatcagttctgcaaaagtctctggaccgatctgaaaccgatctagggaag
gtttctgctgacaatcaacaggccgtggagaacctggaaagtctgaacaaggaggcccaa
atcctacaagagatctcctctgacaaacagcagcagattctgaacattaaacattcagac
cccagaggtgcgggggacggcatcagagagtattacagggaatctggcgtggcagagttt
cgtgtcaatcaagctgtctctgaaccaggaagtgcggtcaaagagtctgcctggctgcgg
aaagcggcagaagccaaactggattccacagagaaagaatttaacctgaaacatcagctg
catatacagaggctggaaaaaattggatctgaactggactccacagacctttcacgacta
agccgtcaggtgtgcggaggggtgtcaggtcttgatggttgcggtgactgtggtggttta
ggctgtgtgagcaaggatggtgtgtcccagtgtggtggagaaggctgtgagactattgtg
acccaatctcaagaggccttgaacaaagccaaaaacttagaccaagaggtcctgcacact
ttaaaagaagtggacaagctaaacaagatggtgtcagatgctcgaggacgtgcggatgag
gctaagctcagtgctcagggagtgttactgagagccaatcagagcaaagcacgagtggaa
cagaccaatgaggagctcagagacctcattcagcaaatacgagacttcctcacaaacgaa
acagatccaaagcgtatagaggaagtagctgatgaggtgatgaaattgagtttgccagtg
tcatctggagcgctaaagaacatgacctcagagatccgagaacatgtggccagactgacc
agcgtggatgatattctgacccagacggcagacaaggcccgcactgcagagagactcctg
caacaagcacaggctgccaatgagagaggtacagcactgaaacagaccactgatgaggtg
aaggaaactctagaggatattgagcgcgctcagactgctgccagcgaaaaactggaagag
gtcaagagtgacatgaaccaaacaaaagaacaaatcactgctgtacaatcaaaaactgaa
gtaacagagttcaaactgagtagcagcacaggaagatttttggatcttgagagagaggtt
gacgaactccaacagaaaactcaagaaacgtccagaagtgcagatcaaactcagaaacaa
actgacaacatcacagaggaaattgagcacaccgcacaagatattgactcgattgtgcga
cctaagtaccaactggccagcggtctgatagatcaaaatgcagcaggtgtgattgatgca
cgtcagaaggccgagctactacggcaggaagcaaaagatatattagtagatgccaccaac
aaactacagagactaagagagctggagagatcatttgtgataaatcagcacactctggtg
gagaaagctcaggagctggaagggctggagaatgaggccagagatatattgcaagaactc
agtcagaaaatcaccatctacagcacctgcgcttaa
DBGET
integrated database retrieval system
