Ctenopharyngodon idella (grass carp): 127510970
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Entry
127510970 CDS
T08802
Name
(RefSeq) ATP-dependent DNA helicase Q1 isoform X1
KO
K10899
ATP-dependent DNA helicase Q1 [EC:
5.6.2.4
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cide03400
]
127510970
Enzymes [BR:
cide01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
127510970
DNA repair and recombination proteins [BR:
cide03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
127510970
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
RQC
Motif
Other DBs
NCBI-GeneID:
127510970
NCBI-ProteinID:
XP_051747133
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Position
4:complement(7302313..7309693)
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AA seq
806 aa
AA seq
DB search
MANNIDDAQAELDSVEAELEVVELQISELLEKQTKLNSRKNKLLKILEGACSSAQPSGSS
KAPKPSFSKQDLQHYEESDFSWSKEVHAKLCSVFQLSKFRPLQQAAINLSMSGKDLFLVM
PTGRGKSLCYQLPALCSKGFTLVIAPLVSLMEDQLMYLKSINVSAVTLNASSTKEDSKQI
LAGMIDKNSPFKLLYVTPEKIAKSKLLMSKLEKAYNMGLLARIAVDEVHCCSQWGHDFRP
DYKLLGILKRQFPNVPLVGLTATATSNVLKDCQKILCVQEPITLTAPFNRPNLYYEVRFK
DNEDCTDQIAALIRGRYKNQSGIVYVFSQKDAEVVATDLQKRDILAQPYHANMEPSDKSL
VHQRWSSKKIQVVVATVAFGMGIDKADVRFVIHHTISKSIENYYQESGRAGRDDGPADCI
VFFGFMDIFRISTMVVMENTGQQKLQNMVGYCQNVDRCRRAMMAIHFDEVWNDEECNEMC
DVCRHGNDYITMDITQHARDVVEIVEMAGSMDEKLTPLKVCEAWMGKGPAKRRKMIKVTS
LSRLEVESIIIHLLLHGYFSEDFSFTPYTTHFYLKLGRKAALLKNGGHSITMKMRRRAVS
HATDVQAVDTQEEAETALIDVSNIERHNKTKIYKNHQNIEKRLAQNHIESLASEASEYVK
PTSVFEVDVEVNLVQEQNCACEQEKGLKNAPEQQSSSPKRRRKQPLTQNCAANANQAKAD
LVSTPSEVSIISAAAVEELHHLRSYYSKQLRRINYISQEHLQSSQPGMLTCMREPFKSLR
FPSRTTIARGARNLWTRVSMRRKLIQ
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcaaataatatcgacgatgctcaagcggaactggactcagtggaggcagagttggag
gtggtggaactgcagatctctgagctgctggagaaacagacaaagctgaactccaggaaa
aacaaactcctgaagatcctggagggagcctgcagctcggcccagccctccggatccagc
aaagctcccaaaccctcattcagcaaacaggacctacagcactatgaggagtcagatttc
tcatggtctaaagaagttcatgcgaagctgtgtagcgtgttccagctttccaaatttcgt
cccctgcaacaggcggccatcaaccttagcatgtcagggaaagaccttttcctggtaatg
cccactggaagaggaaaaagcctgtgttaccaacttccagctctctgctctaagggtttt
acgttagttatcgccccgcttgtgtctttgatggaggatcagctgatgtatctgaagtcc
attaatgtctcggcggtaaccctcaatgcttccagtacaaaggaggactctaagcagatc
ctggcagggatgatagataaaaacagccccttcaagttgctctatgtaaccccagagaaa
attgccaagagcaaactactgatgtccaaacttgaaaaggcctacaacatgggtctgctg
gcacgcattgctgtggatgaagttcactgctgcagtcagtgggggcatgacttcagacca
gattacaagctcctgggtatcctaaagcgccagtttcccaacgtcccattggtcggactg
acagccaccgcaaccagcaatgttcttaaagattgccagaagatactatgtgttcaggaa
cccatcactctgacagcaccgttcaacagaccaaacctttactatgaggttcgtttcaaa
gataacgaagactgtacggaccaaattgcagcattgatcaggggaagatacaaaaaccag
tcagggatcgtgtatgtgttctcccaaaaggatgcagaagttgtggctacagacctgcag
aagagggatattcttgctcagccataccatgccaacatggagccttcagataagtctctg
gtgcatcaacggtggtcctccaagaagatccaggtggtcgttgccactgtggcttttgga
atgggcattgacaaggctgatgtgcgatttgttatccatcacaccatcagcaaatctatt
gaaaattattatcaggagagtggacgtgcaggaagggatgatggcccagcagattgtatt
gtgttctttgggtttatggacatcttcagaataagcacaatggttgtgatggagaacact
gggcagcagaagctacagaacatggtgggatattgtcaaaatgtggacaggtgtcgtcgt
gctatgatggccattcattttgacgaagtttggaatgatgaagagtgcaacgaaatgtgc
gatgtctgtcggcacggcaacgactacatcacaatggatatcacccagcatgctcgagat
gttgttgagatagtagaaatggctggctctatggatgaaaaactgacccctctgaaagtc
tgcgaggcttggatgggaaaagggcccgctaagcggcgcaaaatgataaaggtcacgtcc
ttatcacgcttggaggtggagtccattatcatccaccttctgttgcatggctacttcagt
gaggactttagcttcactccctacacaacccacttctacttaaagttgggccgtaaggca
gctctcttgaagaacggcggtcactcaatcactatgaagatgagaaggagagcggtgtca
cacgccactgatgttcaagcagttgatacacaagaggaagcagagacagcattgattgat
gtctccaacattgagagacataacaaaactaaaatttataagaatcaccaaaatatagag
aaaagacttgctcaaaaccacattgaaagtcttgcttcagaagcaagtgagtatgtaaag
ccaacctccgtatttgaggttgatgttgaggtcaacctcgtacaagaacagaattgtgct
tgtgaacaagaaaagggtcttaaaaatgcccctgaacagcaatcttcttcaccgaaaagg
aggcgaaaacaaccactaactcagaactgtgctgctaatgctaaccaagcgaaagcagat
ctggttagcaccccttctgaggtgtctatcatctctgcagctgccgtggaggaactacac
catctgcgcagttactatagcaaacagttaagaagaatcaactacatttcccaagagcac
ttgcaaagctcccagcctgggatgctgacatgtatgagggagcccttcaaaagccttcgt
ttcccttcaaggacgaccatagccagaggtgccaggaatttatggactcgtgttagtatg
aggagaaagctcatacagtga
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