Ctenopharyngodon idella (grass carp): 127510990
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Entry
127510990 CDS
T08802
Name
(RefSeq) LOW QUALITY PROTEIN: RNA polymerase II-associated protein 3
KO
K23002
RNA polymerase II-associated protein 3
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cide03021
]
127510990
Transcription machinery [BR:
cide03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
127510990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
RPAP3_C
TPR_2
TPR_8
TPR_11
TPR_16
TPR_14
TPR_19
TPR_12
TPR_9
TPR_7
ANAPC3
SSFA2_C
RPN7
Ribosomal_L34e
Motif
Other DBs
NCBI-GeneID:
127510990
NCBI-ProteinID:
XP_051747178
LinkDB
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Position
4:complement(17189208..17197281)
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AA seq
606 aa
AA seq
DB search
MSGNKAVELQIQMRQNAEDLQSFMKELDNWEEEIKKKDQQLRTGNTNETPKTLPPVRNKD
YKKTKKRVKRQTNGDGDLKDQTQTQRIKSYDYQAWDKFDVEKTLESMDAEESPVQSNESD
SEAIQVDRDLALTEKEKGNQFFKDGRYDSAIECYTRAMDADPYNPILPTNRAACFFRLKK
YAVAESDCRLAIALDSKYVKAYVRRAATRTALKKHQEALEDYEMVLKLDPENSEARNEIQ
KLQQVLESSGQTTEKSESVTAAAPTVDPLQQQRLEEQKRKQEAVVQKDRGNAYFKEGKYE
AAVECYSKGMEADGTNALLPANRAMAYLKLHKXGNVYYLXGEQDCSAAIALDATYAKAFA
RRATARASLGRIREAKEDFEQVLKLEPGNKQAINEIEKLTAEMSSSGLLDPVENTQRRTI
QPINKPEHLRSTKPLRRMDIQEISPSVEPHVSAVTSSPHPKIQKIEEISSSPSRASSAGP
EPIPPPPSNSFQLEADLRKISRHPQSTYRYLKQISPDAYPKIFQNSLEPDVLNLMLKTFH
SFYIQHEDASLLLAVLRSLASVRRFDMAVMFMSPTEKKMLQELFDWIHRAGLTDPSVQDL
RKKYGL
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaaataaagccgtggagctgcagattcagatgcgacagaatgcagaagatctg
cagagctttatgaaggagctggacaactgggaggaagagatcaagaagaaagaccagcag
cttcgcaccgggaacaccaacgaaacacctaaaacactcccgccagtgaggaacaaagat
tataaaaagacaaagaagagggtgaaacgtcagactaacggcgacggcgatctgaaagat
caaacgcagacacagcgaataaaatcctacgattatcaggcctgggacaaatttgatgtg
gaaaagactctggagtccatggacgcagaggagagcccggtgcaatccaatgaatctgac
tctgaagcgattcaagtggacagagatctggcgctcactgagaaagagaaggggaatcag
ttcttcaaggacggccggtatgacagcgccatcgagtgctacaccagagcgatggacgcc
gatccctacaaccccatcctgcccactaacagagcggcctgtttcttcagactaaaaaag
tacgccgtggcggagtcggactgtcgtttggcgatcgctctggacagtaaatatgtgaaa
gcttacgtcaggagagcggcaacacgcacggctctgaagaaacatcaggaagctcttgaa
gattatgaaatggttctcaaattggatcctgaaaactcagaggcacggaatgaaatccag
aaactccagcaggtcttagaatcgagcgggcagacgacagagaagagcgagagcgttact
gctgctgcgccgacggtggatccgttacaacagcagcgtctggaggaacagaagagaaaa
caggaagctgtcgtgcagaaagacaggggaaatgcttactttaaagaaggcaagtacgag
gcggctgtggagtgctactctaaaggaatggaggcggacggcaccaacgccctgctgccc
gctaacagagccatggcgtacctcaaactccacaagtgaggaaatgtttactacctatga
ggcgagcaggactgcagcgcggccatcgctctggacgccacgtacgccaaagccttcgcc
agacgcgcaacagccagagcctctttagggaggatcagagaagccaaagaagattttgag
caggttctgaagctcgagccgggaaacaaacaagccataaatgagatcgagaaactcaca
gcggagatgagcagcagcggtcttctggatccagtggagaacacacagagaagaaccatc
cagcccatcaacaaacctgaacatctcagatccaccaaacccttgcggaggatggacata
caggagatatcaccgtccgttgagcctcacgtgtctgccgtcacgtcttcaccccatccc
aagatccagaagatcgaggagatctccagctctccgtccagggcttcgtctgcaggtcct
gaaccgattcctcctccacccagcaacagttttcagctggaggccgacctcaggaagatc
agccggcacccacaatccacttacagatatttaaagcaaatcagcccagacgcttatccg
aagatcttccagaactctctggagcctgatgttctcaacctcatgctcaagaccttccac
agcttctacattcaacatgaagatgcgtctcttctgctggccgtcctgaggagcctggcg
agtgtgaggagatttgacatggccgtcatgttcatgtcgcccacggagaagaaaatgctg
caggagctgtttgactggattcaccgcgctggtctgacagacccttcagttcaagaccta
cggaagaaatacggcctttga
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