Ctenopharyngodon idella (grass carp): 127511039
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Entry
127511039 CDS
T08802
Name
(RefSeq) CUGBP Elav-like family member 2 isoform X1
KO
K13207
CUG-BP- and ETR3-like factor
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cide03041
]
127511039
Spliceosome [BR:
cide03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
127511039
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RNA_bind
RRM_7
RRM_5
BRX_assoc
Motif
Other DBs
NCBI-GeneID:
127511039
NCBI-ProteinID:
XP_051747291
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Position
4:2391542..2548525
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AA seq
567 aa
AA seq
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MLAFGVTAMLEHSSELGFVPSVCVDSMRYPSTANSAVSMRSTEELLLSNGTAGKMNGALE
HSDQPDPDAIKMFVGQIPRSWSEKELKELFEPYGAVYQINILRDRSQNPPQSKGCCFVTF
YTRKAALEAQNALHNIKTLTGMHHPIQMKPADSEKSNAVEDRKLFIGMVSKKCNENDIRV
MFSPFGQIEECRILRGPDGLSRGCAFVTFSTRAMAQNAIKAMHQSQTMEGCSSPMVVKFA
DTQKDKEQRRLQQQLAQQMQQLNSASAWGSLTGLTGLTPQYLAVRGHTHAATPTSSTASA
AAALLQQATTSSNLGAFSGIQQMAGMNALQLQNLATLAAAAAAAQSSASPSTASALTSST
GSLGALASPAGSTANSSAGAMGSLGSLGTLQGLAGATVGLNNINALAGSVNIAHMLSGMA
ALNGGLGSTGLSNGSAGPMDALTQAYSGIQQYAAAALPTLYSQSLLQQQSAAGSQKEGPE
GANLFIYHLPQEFGDQDILQMFMPFGNVVSAKVFIDKQTNLSKCFGFVSYDNPVSAQAAI
QAMNGFQIGMKRLKVQLKRSKNDSKPY
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgcttgcattcggagtaacggcgatgttggagcactcgtctgagctgggctttgtgccg
agtgtgtgtgtggacagcatgcgatacccatccaccgcgaacagcgctgtctccatgagg
agcacagaagaactgctgctgagtaacggtacagctgggaagatgaacggcgccctggaa
cactcagaccagcctgatccggacgccattaagatgtttgtgggtcagatccctcgctcc
tggtccgagaaagagttaaaggagctttttgagccgtatggagccgtctaccagatcaac
atactgcgagatcgcagtcagaatccaccacagagcaaagggtgctgttttgtcacattc
tacacacggaaagctgccctggaggcccagaatgcactgcacaacataaagaccttaact
gggatgcaccatcccatacagatgaagcccgcagacagtgagaaatcaaatgcggtggag
gacagaaagctgttcatcggcatggtgtcgaagaaatgcaatgagaacgacatccgggtc
atgttctctcccttcggacagatcgaggagtgccgcatcttgaggggaccagacggactc
agccgaggatgtgcgtttgtcacgttttctaccagggctatggcacagaatgcaatcaaa
gccatgcatcagtctcaaaccatggagggctgctcctcccccatggtggtgaagtttgcc
gacacgcagaaggataaggaacagcgacggctgcagcagcagttggcacagcagatgcag
cagttgaacagcgcgtctgcctggggcagcttgaccggcctgaccggcctcaccccgcag
tatctggcagtaagaggacacacccacgcagccacgcccaccagcagcacagccagcgca
gccgccgcattgctccaacaagcgaccacctccagtaacctaggagcattcagtggtatt
caacaaatggcaggtatgaatgctctgcagttgcagaatctggccactctagcagcagca
gcggctgcagcgcagagttcggccagcccgtccaccgctagcgccctgacctccagcaca
gggtccctgggagccctggccagcccagcaggttccacggctaactccagcgcgggtgcg
atgggttccctgggttctttgggcacactgcagggtctggccggggccaccgtgggcctc
aataacataaatgcactagcaggtagcgtcaacattgctcacatgctctcaggtatggca
gctttgaacggcgggctgggcagtacgggcctgagtaacgggtcggccgggcccatggac
gctctcacacaggcctactcagggatccaacagtacgcggctgccgccctgcccaccctc
tacagccagtccctactgcagcaacagagcgctgcgggcagccagaaagagggacctgaa
ggagccaacctgttcatctaccacctgccacaggagtttggggaccaggacatcctacag
atgttcatgcctttcggaaacgtagtgtctgccaaagtctttatcgacaaacagaccaat
ctgagcaagtgctttggtttcgtcagttatgacaatcctgtgtcagcgcaggccgccatt
caggcaatgaacgggtttcagatcggcatgaagcgtctcaaagtccagctcaagcgctcg
aagaacgacagcaaaccgtactga
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