Ctenopharyngodon idella (grass carp): 127511057
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Entry
127511057 CDS
T08802
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 12-like isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cide04054
]
127511057
Pattern recognition receptors [BR:
cide04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
127511057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
FISNA
PRY
LRR_6
NOD2_WH
SPRY
LRR_4
ARID
Motif
Other DBs
NCBI-GeneID:
127511057
NCBI-ProteinID:
XP_051747368
LinkDB
All DBs
Position
4:complement(23809153..23831640)
Genome browser
AA seq
1165 aa
AA seq
DB search
MNIYGEREEQDVVYDQNQRAASPKPSCVSMKSEESIHQPPNLCDGAVNSSPRQKEIYSAS
CPAVSGSMSMSRDGSKHLPDISDGAVISDPVDDQPEDLQQNSHQPVDDKLQRIKEQHKTR
MKNRYESLFEGIKVQDNQTLLNRIYTELYIIEGESEVVNEKHEILQMEKTPRTHHSQDTA
IKCNDIFKPLPEPGCEERDKIKTVLTKGIAGIGKTVSVQKFVLDWAEGNANQDVDFMFVL
PFRELNLIQDHQYSLHRLLLDFHPELQDLHSNIYEKCKVVFIFDGLDESRMKLMFSDSGK
VSDVTETSSVVVLMSNLMKGELLPSALIWITSRPAAANQIPSKYINRLTEIQGFDEPQKE
EYFRKRISDEHQANRIISHIRRARSLHMMCHIPVFCWISSTVLQKILKEDLSAEIPQTLT
EMYIHFLLTQINMRNEKYEKRDPEKLLQSNREVIGKLAKVAFKQLMKGNVMFYEEDLIES
GTDVIDASVYCGICTEIFKEESVIHQRKVYSFIHLSFQEFLAAFYVFYSHVVKNKELLQF
LGEKYKYDHGSEYYSNCGYNEHISYEVSLYELLISAVDKTLQNENGHLDLFLRFLLGISL
ESNQRLLLDLLVHTENSSETIREITQYIKDEIKTNDNLSADRSINLFLCLLEVNDQTLYI
EIQEFVKSDKHSEEKLSPAHCSTIAYMLQMSEEVLDEFDLMKYNTSDEGRQRLIPAVMNC
RKAVLAGCGLSDLHCESLSSALQPSNSHLTELDLSNNDLQKSGVKLLSVGLKSSRCELHK
LRLAGCGLSDLHCESLSSALQSSNSHLRELDLSNNDLRDSGVKMLSVGLKSSHCQLNILR
LVICNFTGQCCGSLSSALQSSNSCLRELDLSNNDLQDSGIKILSDGLKSSHCQINILSPT
RPSERLSGCMLTEEGCRYVSSALNSNPSHLRELDLSYNYPGDSGVKLLGDTLNHPNCTLD
KLNVDHGGEFRITTGLHKYACDLTLDPNTANTCLILSEKNRKVTYVREKQSYPDHPERFD
ECHQVLCRESLPGRCYWEAEWSGHDVDMSVTYKRISRKGGSDDCWFGSNKNSWSLICSNF
GFTVRHNNKFTVTRVPSHSCRRVGVYVDVSAGTLSFYSVSDTHTLTHLHTFTSTFTQSLC
AGFTVFDGSSVFLCPIVNLCATTET
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgaatatctatggggagagagaggagcaggatgttgtttatgaccagaaccagagagca
gcatctccaaagcccagctgtgtctctatgaagagcgaggaatcgatacatcagcctcct
aatctatgtgatggagcagtgaactctagccccagacaaaaggaaatttattcagcatca
tgtccagctgtatccggatctatgtctatgagtagagatggatctaaacatctccctgat
atcagtgatggagcagtgatctctgaccctgtagatgaccagcctgaagacctgcagcag
aattctcaccaaccagtagatgataaactacagagaatcaaagaacaacacaaaaccaga
atgaagaacaggtatgagagcttatttgagggaatcaaagttcaagataaccaaactttg
ctgaacaggatatacacagagctttacatcatagaaggagagagtgaagtggtgaatgaa
aaacatgagattttacagatggagaaaacacccagaacacaccactcacaagacactgca
atcaaatgcaatgacatatttaaacctctgcctgaaccaggatgtgaggagagagacaaa
atcaagactgttcttactaaaggcattgctggaattggaaaaaccgtctctgtgcagaag
tttgttctggattgggcagagggaaatgccaatcaggatgtagatttcatgtttgtgctt
ccatttcgagagctaaacttgattcaagatcatcagtacagtcttcacagacttctgctg
gactttcatcctgaacttcaagatctgcactcaaatatttatgagaagtgtaaagttgtg
ttcatctttgatggtctggatgaaagcagaatgaaactgatgttttcagacagtgggaaa
gtttctgatgtaactgagacttcatcagtggttgtgttgatgtcaaacctcatgaaagga
gagctgcttccctctgctctcatctggatcacctccagaccagcagcagccaatcaaatc
ccctccaaatacatcaaccgtctgacagaaattcagggatttgatgagcctcagaaggag
gaatatttcaggaagagaatcagtgacgagcatcaagccaacagaatcatctcacacatc
agaagagcaagaagcctccacatgatgtgccacatacctgtcttctgctggatctcatcc
actgtgcttcaaaagatcctaaaagaagatctgagtgcagaaatccctcaaactctaact
gaaatgtacatccactttctgctgactcagattaacatgaggaatgagaagtatgaaaag
agagatccagagaaactcctgcagtccaacagagaggtaattggaaaacttgctaaagtg
gcattcaaacagctgatgaaaggcaatgtgatgttctatgaggaggacctgattgagagt
ggcactgatgtcattgatgcctccgtgtattgtgggatttgcactgaaatctttaaagag
gaatctgtgattcatcagagaaaagtctacagcttcatacatctgagctttcaggagttt
ctagctgcgttctatgtgttttactcccatgtggttaagaataaggaattactgcagttt
ctgggtgaaaaatataaatatgatcatggctctgaatattattcaaattgtggttataat
gagcacatctcttatgaagtttctctgtatgagctactaatatcagcagttgataaaact
cttcagaatgaaaatggacacctggatctttttctgcggttcctgctgggcatctccctt
gagtccaatcagagactcttacttgatcttctggtacacacagagaacagctcagagacc
ataagagaaatcacacagtacattaaagatgaaataaagacaaatgacaatctttcagct
gacaggtccattaatctgttcctctgtctgctggaagtgaatgatcagactctgtacata
gagattcaagagtttgttaaatcagacaaacactcagaggagaaactttctcctgctcac
tgctcaacaattgcctacatgcttcagatgtctgaagaggtgctggatgagtttgatctt
atgaaatataacacatcagatgaaggaagacaaagactgataccagctgtgatgaactgc
agaaaagctgtacttgctggatgtggtctctctgatctacactgtgaaagtttgtcttca
gctctccaaccatcaaattcccatctgacagagctggacctgagtaacaatgatctgcag
aaatcaggagtaaagttgctctctgttggactaaagagttcacgctgtgaactccacaaa
ctgagacttgctggatgtggtctctctgatttgcactgtgaaagtttgtcttcagctcta
cagtcatcaaactctcatctaagagagctggatctgagtaacaatgatctacgggattca
ggggtgaagatgctctctgttggactaaagagttcacactgtcaacttaacatactgaga
ttggtcatctgtaatttcactggtcagtgctgtggaagcttgtcttcagctctacaatca
tcaaactcttgtctgagagagctggacctgagtaacaatgacctgcaggattcaggaata
aagatactttctgatggactgaagagttcacactgtcaaataaacatactgagcccaaca
cgcccttctgaaagattgtctgggtgtatgttgacagaggaaggctgtcgttatgtgtct
tcagctctaaattcaaacccctcacacctacgagagctggatctgagctacaattaccca
ggagattcaggagtcaagttgcttggtgatacactcaaccatccaaactgcacactggac
aaactaaatgtggatcatggaggagagttcaggattacaacaggactacacaaatatgcc
tgtgatctcacactagatccaaacacagcaaacacttgtctcattctgtctgagaagaac
agaaaggtgacatatgtgagagaaaaacagtcatatcctgatcatccagagagatttgat
gagtgtcatcaggtgttatgtagagagagtctgcctggacgctgttactgggaggctgaa
tggagtggacatgatgttgatatgtcagtcacatataaaagaattagcaggaaaggaggg
agtgatgactgttggtttggatccaataaaaattcttggagcctgatctgctctaatttt
ggttttactgttcgtcacaataataagttcactgttacacgcgtcccttcacactcctgt
aggagagtaggagtgtatgtggatgtgtcggccggcactctgtccttctacagtgtctct
gatacacacacactcacacacttacacacattcacctccacattcactcagtctctctgt
gctggatttacagtttttgatggttcctcagtgtttctgtgtccgattgtaaacctgtgt
gcaacaacagagacgtaa
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integrated database retrieval system
