Ctenopharyngodon idella (grass carp): 127511243
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Entry
127511243 CDS
T08802
Name
(RefSeq) E3 ubiquitin-protein ligase RNF38 isoform X1
KO
K19041
E3 ubiquitin-protein ligase RNF38/44 [EC:
2.3.2.27
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127511243
Enzymes [BR:
cide01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127511243
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127511243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-C3HC4_3
zf-ANAPC11
zf-RING_UBOX
VPS18_RING_C
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
127511243
NCBI-ProteinID:
XP_051747999
LinkDB
All DBs
Position
1:18305300..18341339
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AA seq
674 aa
AA seq
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MPIATTGHSTSREPRVCSPDPVPKRADLCEDAGAQPAEYRGSEGGHSLGSTRLSGALESS
SAVSHSPPTSPFHHHHHHHHHHHPHPVTMEPPRTRSRSRSGFYHGGLSNSNGNAGSGGGA
LSPAGGISHHQQQQQQFGAAHGHTENLRPPGSMLSPGAHRHAGPGMHRNSGAGAMGGVYH
YHSEHACADPTDKTEDSPSPKRQRLSQQSVLEFTSAPPSTPSPPIRPWELPPSRRPHPYP
HPHYHPERCHTPARHRRSPPVRRQRGRRERLSRHHPPHGSPGGGQDENYRHPPHPHSLHP
YGQPPSHPPPGLDEPRAFHPPTLSPRLLHPPQQGAMVMDLHEQLPQGTVPVSYTVSPVPP
HGLPAPLCTGQHLPACSSQQQVPACSVVFSGQQHYPICSVPPPMLPACSVQHLPVPYAFP
SLLSSDPPFLLHPPHLSHHPPHLPTPGQFLPFQTQQSRSPLQRIENEVELLGDHLSVGGG
FNYPHSGHPSPLPPSTPLQFLSHEPLPQELFGVPYPHFMPRRITGRRYRSQQAVPPPPYH
PSLLPYFLWYRSVLPVQPTAVGPAISLELDVDDGEVENYEALLNLAERLGEAKPRGLTKA
DIEQLPSYRFNPSNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCP
ICRADASEVQRDSE
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgccaatcgccactactggtcattcaacgtctcgagagccccgtgtctgttccccggac
cccgttcccaagcgtgctgatttatgcgaggacgcaggggcccagccagcagaatacagg
ggttcggaggggggccacagcctgggcagcactagactttctggagcgcttgagagctcc
tctgcggtgtctcattcccctcccacttcccctttccaccaccaccaccaccatcatcat
catcatcacccccatccagtgactatggagccccccaggactcgatctcgctcgcggtct
ggattttaccacggtggattatctaactcgaacggtaatgctgggagtggcggtggtgcg
ctaagtccagctggaggaataagccaccaccaacagcagcagcagcagttcggagctgct
catggacacacggaaaacctgcgcccacccgggagcatgctttccccaggcgcccacaga
catgcagggcctggaatgcacagaaactccggagcaggtgcaatgggaggagtataccac
tatcattcagagcatgcatgtgcagaccccactgacaagacagaggattctcctagtccg
aagagacagcgtctttcccagcagtctgtattggagtttacctcggcccctccttccaca
ccctcaccaccaatcagaccatgggagcttccgcccagtcgcaggccacacccctatccc
cacccacactaccaccccgagcgctgccatacacctgcacggcacagacgcagtcctcca
gtgcggcgtcagcgtggccgtcgagagcgtctgtcacggcaccatccccctcatggttcc
ccgggtggggggcaggatgaaaactaccgccaccctcctcacccacattctcttcatccc
tacggccagccaccatcccaccctccacctggccttgatgagccccgggcctttcaccct
cccacgctctcgccacggttattgcacccgccgcagcagggtgccatggtgatggacctt
catgagcagcttcctcagggtacggtgccggtatcatatacagtttctccagtgccgccc
catggtctacctgctcccctctgtacgggacagcatctcccagcatgctcttctcagcag
caggtgcctgcctgttctgtggtcttcagcggacagcaacactatccaatctgtagcgta
ccacctccaatgttgccggcatgttcagtgcagcatttgccagtgccgtacgcatttcca
tctcttctctccagtgatccacccttcctgcttcatcctccgcatctgtcacatcatccg
ccccacctccccactcctggacagttcttacccttccagacgcaacagtctcgatctcca
ctgcagaggatagagaatgaggtggagttgttgggggatcatctgtcggtaggtggaggg
tttaactatcctcactctggccatcctagtcctctgcccccttctaccccactgcagttc
ctctctcatgaacccctgccccaggagctctttggagtgccgtatccccacttcatgcct
cggcgaatcacaggcagacgctatcgctctcagcaggccgtacctccacctccgtaccac
ccaagtctgctgccctacttcttgtggtacagatctgttcttccagtccagccgacagca
gtgggtcccgccattagcctagagctggatgtagatgatggagaggttgagaattatgag
gctctgttaaacctcgccgagcgtctcggagaagcaaagcctagaggtttgacgaaagcc
gatatcgaacagctgccttcctacagattcaaccccagcaaccatcagtctgagcagact
ttgtgtgtagtgtgcatgtgtgatttcgagtctcgtcagctgttgagagtactgccctgt
aatcacgaattccatgccaagtgtgtcgataaatggctcaaggctaacagaacctgtcct
atttgccgagcagatgcttctgaagtccagcgggattctgagtga
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