Ctenopharyngodon idella (grass carp): 127511403
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Entry
127511403 CDS
T08802
Name
(RefSeq) caprin-2 isoform X1
KO
K18744
caprin-2
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cide03019
]
127511403
Messenger RNA biogenesis [BR:
cide03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
127511403
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Gene cluster
GFIT
Motif
Pfam:
Caprin-1_dimer
C1q
Caprin-1_C
Motif
Other DBs
NCBI-GeneID:
127511403
NCBI-ProteinID:
XP_051748168
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Position
4:7979437..7990449
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AA seq
950 aa
AA seq
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MGFLCSEGIKRETKIMVQLSPSRTIETLIVEKEDGQGSPKFESPRVLTALQLALSPDMTT
YYGYEKYIEDGLICLKHKIRNIEKKKLKLESYNERLKKGDKLNQDQLEAVGKYEEVVHNL
KFAKELQKTIGSLTQDLLKAQRKVVRQEKIMRIEQERKRLSLILQVQYVLNSLKREDVRR
NFCNTRQHSRYLTTQDMESLLDLASLLGCKRDHSMSLEDQMEQAAIVYWELLEGNEKPVA
GSTYKHMKDKLLQLVDCGFFDHIPLPKVDSQEKTEAVKTDPPPRPCGLSTLVKLSSKEVP
SKEFLNRRYLSETDVAEHRQDDNASPRSWKDEFLAMKEREPPDSWEMEFSDPPVSSQSPI
QKPWKGAAGLIPKTTDIVKRPTVDPKEKRQRKTKGEQDSKSVPVAVEVFGSPSPLPKDPV
QRKQQLETLMDQISGSFSFMQESLLDGETSPVNSRAKRCHPSPDCSTPLAQRELTKSPSD
ILPPSQQSTPLRILLSGEGKGCLSNGDRSITGSDLDLHHEDEPHKQSEGFTSPPLYRRGS
SISVPLENQSTVQAGKQPLCNGVSTSVSEQTFSTPPSHRSITAENTFHNIHSVFNVASLP
ISESSEMKSDESGFSESMQLSYTSAKTQSYSTASTQTPPELNPPEDDLQIEGQYQLECPV
STGGHVFSTPQPQSRLSQSCYPRGTARGMTRAGRGLGHSYRSPGGYRGGYEAYRVNVRSP
GGGFISQTHTTHRDPGSALYVSRENGYQQSFKRGGGTATQRSSAGWSDSSQVSSPDREGA
YPFDSGISDTLSIPPMEVPITPQGTHTLMPVHLYPLTQLRVAFSAARTANFAPGTLDQPI
AFDLLHTNLGEMFDTTTGRFTCPAPGAYVFIFHILKLAISVPLYINLMRNEEVMVSAYAN
DGAPDHETASNHAVLQLFQGDQVWLRLHRGAIYGSSWKYSTFSGFLLYQD
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgggtttcctctgctctgagggcataaaaagagagactaagatcatggttcaactgtca
ccatctcggactatagagacgttgatcgtggagaaggaggatggccagggcagccctaaa
tttgaatcccctcgagtgcttacggccctccagctcgcccttagcccagacatgaccacc
tactatggctatgagaagtacattgaggacggcctcatctgcctcaagcacaagattcgt
aacattgagaaaaagaagctgaaactggaaagctacaatgagaggctgaaaaagggggac
aaactaaatcaagaccaactggaagctgtggggaagtacgaggaggttgtccacaatctt
aaatttgccaaagagctccagaagaccattggttccctcacacaagatttgttgaaggct
cagcggaaagttgtccgccaagagaagatcatgaggattgaacaagagaggaaacgtctg
agcttgattctccaggtgcaatacgtcctcaacagtctgaagagagaggacgtccggagg
aacttctgcaacacgagacaacattcccgttacttgaccacacaggacatggagagcttg
ctggatctggcatcattattgggatgcaaacgagaccatagcatgagtttagaggatcag
atggaacaggctgctattgtttactgggagcttctggaagggaatgaaaaaccagttgct
ggctcgacatataagcacatgaaggataagctacttcagttagtagactgtggctttttt
gatcacataccacttcctaaagttgacagtcaagagaagactgaggctgtaaagactgac
cctccacctaggccttgtggcctctccacactggtgaagctgagctcaaaagaagtgcct
tccaaagagtttcttaacagacgatacctatctgaaacggacgtcgctgagcatagacag
gatgacaacgcgtcgccccgtagctggaaggacgagtttttggccatgaaggaaagggag
ccaccagactcatgggaaatggagttttctgatcctcctgtatcctctcagtcccccata
cagaagccatggaaaggggcggcaggattgattcctaagactacagacattgtgaagaga
cccacggttgaccctaaggagaaacgtcaaaggaagaccaagggggagcaggactccaaa
tcggttcctgttgcagtagaagtctttggctctccatctccattaccaaaagaccctgtt
cagcgtaaacagcaactggagactctgatggaccagatctctggctctttcagcttcatg
caggagtctcttctggatggagaaacttcacccgtaaacagtcgagcaaagagatgccat
ccatctccagactgctctactcctcttgcacagagggagctgacaaaaagcccatcagat
attctgcctccatcccagcagagcactcctttacgaatcctgctgtctggagagggtaaa
ggctgtctgtcaaatggagatcgttctataactggctctgaccttgatctacaccatgaa
gatgagccacataagcaaagtgagggcttcacctctcctccattgtaccgcaggggatcc
tcaatctcagtccctttagaaaaccaaagtactgtacaggcaggaaaacagccgttatgc
aatggagtatcaacctctgtgtctgagcagacattttcaaccccacctagtcaccgatcc
atcactgcagaaaatactttccacaacatccactctgtgtttaatgtagcatctttgcca
atcagtgagagctcagaaatgaagtcagatgagagtggattctcggagtccatgcaactg
agttacacgtcagccaaaacccagagttattccaccgcaagcacccagacgccacctgaa
ctcaacccacctgaagatgacctacagattgaaggccagtaccagctggagtgtccggtc
agtacaggtggtcatgtgttctctacccctcagccacagtctcgtctgagtcagtcctgt
tacccccgcggtacagcgagaggtatgacgcgtgcaggcaggggtttgggtcactcatac
agatcacctggtggctacagaggtggttatgaggcctacagggtgaatgtgcgttctcca
ggagggggcttcatttcccagacccacacgacacacagagaccctggatctgccctttat
gtgtctagagaaaacgggtatcagcagagcttcaaacgaggtggaggcacagcaactcaa
aggagcagtgctggttggagtgactcttctcaggtgagcagcccagatcgagagggtgcg
tatccgttcgactcaggaatcagtgacactctctccatcccgccaatggaagtgcccatc
acaccccagggcacgcacactctgatgcccgtacacttgtacccgctcacccaactccgt
gtggctttctctgccgcccgcacggccaacttcgcccctggcactctggatcagccgatc
gccttcgacctgctgcacactaatctcggagaaatgttcgacacgaccacaggccgtttc
acctgtcccgctcctggtgcttatgtctttatcttccacatcctgaagctggccataagc
gtgcccctgtacatcaacctcatgcgcaatgaagaggtgatggtgtctgcgtatgccaac
gacggcgctccggaccacgagaccgccagcaatcacgctgtcctccagctgttccagggc
gaccaggtgtggctgcggcttcaccgcggcgccatctatggcagcagctggaagtacagc
accttctctggtttcctgctgtaccaggactga
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