Ctenopharyngodon idella (grass carp): 127511456
Help
Entry
127511456 CDS
T08802
Name
(RefSeq) flap endonuclease GEN homolog 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cide03400
]
127511456
DNA repair and recombination proteins [BR:
cide03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
127511456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Chromo_SEND1
Motif
Other DBs
NCBI-GeneID:
127511456
NCBI-ProteinID:
XP_051748229
LinkDB
All DBs
Position
4:complement(16978602..16985664)
Genome browser
AA seq
738 aa
AA seq
DB search
MGVSELWSILDPVRQSVPLYSLAGKTLAVDLSLWVCEAQHVQGMMGKVTKPHLRNLFFRV
SSLTLMGVKLVFVMEGDAPRIKAETMSKRTEMRFGNLKAKSVPKPAAAKNTNRGRFKAVL
RECADMLDCLGVPWVTAAGEAEAMCAFLDSQGVVDGCITNDGDAFLYGARTVYRNFNMTS
KDPQVDCYQMSRVQAELGLSRETLVGLAVFLGCDYIPKGVAGVGKEQTLKLIQSLRGQTL
LQKFDEWSSDRAERSEVAVKKVTHCLVCRHPGSAKSHERSGCVFCQSERFCSPQDYDSQC
PCDWHRTEHTRQASSVEANIRKKTLACEQFPFTEIISEFLVTKDKPVPPFRRRKPNLPLM
QAFALEKMDWPKHYSSEKILPLMTYTELMNRQRGRDSHSLIQPIRIYKPRIKNGVSCFEV
IWTKPDHYVFADGCEEQTEVRTVEEESLFSLAFPGIVQDFHRERAEAQENKMKKKKPKVK
KEKPADSHDDVLDLFAQMSLQTDTDPDAVLSSGSTQKPPQPDSPPSPEIPAQCSPASQNS
PSVSALIGQLHLSSVDWDSSSFTASPSSSDKTDLRPAESSTRSLKERIMVKNTRTQHPKS
PESLHSIPSAPCTAAGTTTKTPINLEQNPTKKPAARPLKTAGGTVCKTSRISDDSDTENR
PGSQKPRSKVKVTSKPQRPEIPQKSPNHDQTRSIPAKTPEKPANLVQVHHGKIEDDDSDA
SVDSPRPLAERLKMRFAK
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgggggtttctgagctctggtccatactggatccggtccggcagtctgtcccgctctac
agtctggcaggaaagaccctcgccgtggatctcagcctgtgggtctgtgaggcccagcat
gtgcagggcatgatgggaaaagtcacaaagcctcatctcaggaatctgtttttccgcgtg
tcctcgctcactctgatgggtgtgaagctggtgtttgtgatggagggagacgctcctagg
atcaaagccgagaccatgagcaaacgcactgagatgagattcggcaatctgaaggccaag
agcgtcccgaaaccagcagctgccaaaaacaccaacagaggccgattcaaggccgttctg
agagagtgtgcggacatgttggactgtctgggtgtgccgtgggtgacggcggccggtgaa
gcggaggccatgtgtgcgttcctggactctcagggcgtggtagatggctgcattactaat
gacggcgacgccttcctgtacggtgctcggaccgtttacaggaacttcaacatgacttct
aaggatcctcaggtggactgctatcagatgtctcgtgttcaggctgaactcgggctgtcc
agagaaacgctcgtgggtctggccgtcttcctgggctgcgactacatcccgaagggcgtc
gctggagtcggtaaagaacaaacactgaagctgattcagagtctgagaggacaaactctt
ctgcagaagttcgatgagtggagctcagacagagctgaaaggtcagaggtcgcggtgaag
aaggtcacccactgtctggtctgtcgacaccctggctctgctaaatctcacgagcgcagc
ggctgtgtgttctgtcagagcgagcgcttctgttcgccgcaggactacgattcccagtgt
ccctgtgactggcatcgcactgaacacactcgccaggcctcctccgtcgaagccaacatc
aggaagaagacgctggcgtgtgagcagttcccgtttacagaaatcatcagtgagtttttg
gtgacgaaggacaaacccgtgccgcccttccggaggaggaaacccaacctgccgctgatg
caggcgtttgctctggagaagatggactggcccaaacactacagcagtgagaagatcctc
ccgctcatgacctacactgaactgatgaaccgacagagaggcagagactctcacagcctc
atacagcctataagaatatataaacctcgtataaagaacggcgtctcctgcttcgaggtc
atctggacgaaaccagatcattatgtgttcgctgacggctgcgaggagcagacggaggtg
cggacggtcgaggaagagtctctcttcagcctggcgtttcccgggatcgtccaggacttc
catcgggagagagccgaggctcaggagaacaaaatgaagaaaaagaagccgaaagtgaag
aaagagaagccggccgattcccatgatgacgtgttggatctgttcgctcagatgtctctg
cagacggacacggatccagatgccgttttatccagtggatctacccagaaaccaccacag
cctgattcccctccgtcccctgagatcccagcccagtgctctcctgcttcccagaattcc
ccttcggtgtctgctctgattggccagctgcatctcagcagtgtagactgggactcttcc
tcgttcacggcctctccttcctcgagcgacaagactgacctgagacctgcggaaagctcg
actcgttctctcaaggagcggataatggtgaaaaacacccggacgcaacatcccaagagt
cctgaatccctccattcgatcccatcagcgccctgtacagctgcaggtacaacaaccaaa
acccctataaacctcgagcagaatcccaccaaaaaacctgcagcgaggcctctgaaaacc
gccggaggaacggtgtgtaagacgagccggatcagtgacgacagcgacaccgagaaccga
cccggatcacagaagccgagaagcaaagtcaaggtcacgtccaaaccacagagacccgaa
atcccccagaaatcccccaatcatgaccagacgaggagcattcctgctaaaaccccagaa
aaaccagctaacctcgtccaggtgcatcatgggaagattgaggacgatgattcggacgct
tcggtggacagtcctcgaccgctggccgagaggctgaaaatgagattcgcgaagtga
DBGET
integrated database retrieval system
