Ctenopharyngodon idella (grass carp): 127511529
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Entry
127511529 CDS
T08802
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein isoform X1
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127511529
Membrane trafficking [BR:
cide04131
]
Endosome - Lysosome transport
Others
Others
127511529
Endosome - Golgi transport
127511529
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
127511529
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
Beach
DUF1088
NBCH_WD40
PH_BEACH
WD40
Neurobeachin
Laminin_G_3
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR75_1st
WDR55
WD40_MABP1-WDR62_2nd
WD40_WDHD1_1st
SUKH_6
EIF3I
Motif
Other DBs
NCBI-GeneID:
127511529
NCBI-ProteinID:
XP_051748384
LinkDB
All DBs
Position
1:complement(21204282..21464257)
Genome browser
AA seq
2884 aa
AA seq
DB search
MASAGDSAVGIPIRGIRMKFAVLAGLLEAGEVSNRDIVETIFNLLVGGQFDLEMNFIIQE
TESINCMVELLDKCDSTCQAEVWSMFTAVLKKSLRNLQACTDIGLIQLVLQRIDRADTMI
ADLVVDMLGVLASYSITVKELKLFFSKLKGEQGQWPPHAVKLLSVLKSMAQRNGPDSFFS
FPGKSAAAIALPPIAKWPYQNGFTFHTWLRLDPINNINVDKDKPYLYCFRTSKGLGYSAH
FVGGCLIVTSLKSKAKGFQHCVKYDFKPQKWYMVTIVHIYNRWKNSEISCYVNGELASYG
EITWFVNTSDTFDKCFLGSSETADANRVFCGQMGAVYLFSEALSAAQILAIYQLGPGYKG
TFKHKAESDLLFAEHHKMLLYDGKLSASIAFTYNPRATDAQLCLESSPKNNASIFVHSPH
ALMLQDVKAVVTHSVQSAIHSIGGVQVLFPLFAQLDFLQHSDDELDTSVCCTLLSFVMEL
LKGSVAMQEQVLACKGFLVIGYSLEKSSKVHVTRSVLDIVLAFARYLSNLPTGVLLLKQL
CDHILFNPAIWIHAPAKVQLVLYTYLATEFISTVNIYNAIRRVGTVLQVMHTLKYFYWVV
NPLDRSGITPKGLDGPRPNQKEIHSLRAFLLLFVKQLIMKDHGVKEDELQSILNYLLTMH
EDDNLMDVLQLLVALMSEHPGSMVQAFDQRNGIRVIFKLLASKSEGIRVQALKVLGYFLK
YLSPKTKSEVMLAHGLFSLLTERLMLHSNQFTVTTYNVLFEILTEQICTQVIHKQHPDPD
STVKIQNPQILKVIAALLKNAPPGAESMEVRRIFVSDMIKLFNNSRENRRSLLQCSVWQE
WMLSLCFINPKNSEEQKITEMVYAIFRILLYHAIKYEWGGWRVWVDTLSITHSKVTFEQH
KENLARMFLEYQRMGSEGGSESRIRTISGAEDSQFLASANGELQAEETAPSTVIELRVEE
QVSDQPRDSEEMRTQIPVTVSNILARDEEERQADTVATSPETEEGNKDEQDTLREPEKDN
EMKNMEDNHKMEANKDGEPERVEGVEADITMTEGRVKEKEKSDLSVTDDADSTQTANDKD
AKVETEAVKMSDEDDGKTSNTETEPNTQVQDTEKGPGDSSPEAVKEAKVEETTDASSEVS
AQQETSMTDASDMNEDSPDVSSVSNFVKVSDDSTEESSFVSATAGETDDHGVEKEDDGME
EEDKLETEKDEKSMENEKAEETKDTPAPMVEVDLNQSTSTDETKLHTEATEGHGALEAEQ
AAEVSPPAEVSPSTESNSEDPGANQDTLKAAGTESSATKTKEIKIARLDVSSVASDTERL
ELKHTSTTNVSSDQAAASSPSGQGNEGSSSARSTMFRIPEFRWSHMHQRLLTDLLFSIET
DVQMWRSHSTKTVMDFVNSSENVVFVHNTVHLVSQVVDNLIMACGGILPLLSAATSSSHE
LENIEPSHGLAVEASLMFLQRLISLVDVLIFASSLNFTEIEAEKNMSSGGILRQCLRLVC
AMAVRNCLECQQHTLGKSGAESSRGQQSLLGAAKSIPAQSPVDIVTGGMSPIRDLDRLLQ
DMDINRLRAVVFRDIEDSKQAQFLALAVVYFISVLMVSKYRDILEPHNDKRQAQRSQSIR
STESVQSDLENGLSPHRRDSSIEGEKTSAIPSDAETRTGPDAVSEALSTLSSEVRRGSEV
TNRDSKGKNVNVKDILRSLVSAPSDDIMVDPSLIPPGFLGAVGDVSRDQSVQFHSFDRSV
VVAPKKAGGAPSPGMSTVSAAASVPSATAASSGGTPVDSVSVVSAGDTVQSTESAPGGTS
TSSNLPSVPAISPMTQSSAPSMSISERLEHALEKAAPLLREIFVDFAPFLSRTLLGSHGQ
ELLIEGTSLVCMKSSSSVVELVMLLCSQEWQNSIQKNAGLAFIELVNEGRLLSHTMKDHL
VRVANEAEFILSRQRAEDIHKHAEFESQCAQYAAEKRDEEKMCDHLIRAAKYRDHVTSTQ
LIQKIVNILTDKHGAWGCSGFSRPREFWRLDYWEDDLRRRRRFIRNPFGSTHSEATLKAA
AEHAPEEDVLKGKQSIRSSVLGKQNSESELLLEDDDTLSSLEEKELENLTGPVNLSTSAQ
LVAPAVVVKGTLSITALELYFEVDEEDPSFKNIDPKILAYTEGLHGKWQFTEIRAIFSRR
YLLQNTALEVFMANRTAIMLNFPDAATVKKVVHCLPRVGVGTNFGLPQTRRISLASPKQL
FKASNMTQRWQRREISNFEYLMFLNTISGRTYNDLNQYPVFPWVITNYDSEDLDLTLPSN
YRDLSKPIGALNPKRAAFFSERFETWEDEQVPKFHYGTHYSTSSFTQMWLLRTEPFTTFF
LNFQGGKFDHADRTFSSVSRAWRNCQRDTSDVKELIPEFYYLPEMFVNSNNYNLGVMDDG
TVVSDVELPPWAKSPEDFVRINRLALESEFVSCQLHQWIDLIFGYKQQGPEAIRALNVFY
YLTYEGAVNLSSISDPMLREAVESQIRSFGQTPCQLLIEPHPPRSSAMQVYLLLQTPLMF
TEQMQQDVIMVLKFPSNSPVTHVAANTQSGLTNSAVITVTANRLFAVNKWHGLTGHQSSS
VQDQQYQLPVEIDPLIAYNVGTHRRQISDLLDQSIQVNAQCFVITADNCFILLCGFWDKS
FRVYSTDTGKLTQIVFGHLDVVTCLARSESYIGGDCYVLSGSRDATLLLWYWNGKHSSIG
ENPGTEFVNPRAILTGHDCEVTCASVCAELGLVISGCREGPCLVHSMNGDLLRTLEGPDG
CVRPRLVMSSTEGHCVIYYDKGHFCVFSINGKLLGHMEVEDNIKAMLLSKDGQYLLSGGD
AGVLSVWQIHDLKQLFTYPGCDAGIRSMAMSHDQRCIITGMASGSIVLFYNDFNRWHHEY
QTRY
NT seq
8655 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgcaggtgacagcgctgtcgggatccccatcagaggaatccgcatgaagttc
gccgtgctggcagggctcctggaggctggtgaagtctccaatcgggacatcgtggagacg
atcttcaatctgctggtcgggggacagtttgacctggagatgaacttcatcatccaggag
acggaaagcatcaactgcatggtagagctgctggataaatgtgactccacctgccaggca
gaggtgtggagtatgttcaccgccgtgctgaagaagagtttgcgaaacctccaggcctgc
actgatatcggccttatccagctggtgctccagcgtatagaccgagctgacaccatgatc
gcagatctggtggtggacatgctgggagtgctggccagctacagtatcacagtaaaggaa
ctgaagctgttcttcagtaaactgaaaggagaacaaggccaatggccacctcatgctgtc
aagctgctgtccgtgttgaagtccatggctcaaagaaatggcccagattcctttttcagc
ttcccaggaaagagtgctgcggctattgctcttccacctattgcaaagtggccataccag
aatggcttcaccttccacacctggctgcgcctggaccccatcaataacataaacgttgac
aaggacaagccttatctctactgtttccgtaccagcaaaggtttgggctactctgcacac
tttgtgggtggatgtctgattgtgacctctctaaaatccaaagctaaaggcttccagcac
tgtgtgaaatatgactttaaaccacagaagtggtatatggtgaccatagtgcacatctat
aatcgatggaagaacagtgaaatcagctgctatgtcaacggagagttggcgtcatatggc
gagatcacctggtttgtcaacacaagcgatacgttcgacaaatgttttctgggctcatca
gaaacagcagacgctaaccgtgtgttctgcggtcagatgggggcagtgtatctgttcagt
gaagctctcagtgctgctcagatattggccatctatcagctggggcctggatacaaggga
acttttaagcacaaggcagagagtgacctgctgtttgcagaacatcacaagatgctgctg
tatgatggaaagctgtctgcaagtatcgccttcacctataatccccgggccactgacgct
cagctgtgtctggagtcctcccccaagaacaatgcctccatctttgtgcattcaccacac
gccctcatgctgcaggatgttaaagctgtggtgacacactcggtccagagtgccatccat
tctataggaggagttcaggtccttttccccctgtttgcacagctggattttctccagcac
agcgatgacgagctggacacctccgtctgttgcacactactgtcgtttgtgatggagctg
ttgaagggctctgtagctatgcaagagcaggtgctggcctgcaagggctttctcgtcatt
ggttactcactggagaagtcttccaaagtacatgtgacacgatctgtgctggacatcgtc
cttgccttcgcccgttaccttagcaaccttcctactggtgttttactcttgaaacagctg
tgtgatcacatcctcttcaaccctgccatctggattcatgccccagctaaggtacagctg
gttctctacacctacctggcaacagaattcattagcaccgtcaatatctacaatgccatc
cgtagagttggaactgtattgcaggtcatgcacacactcaagtatttctactgggttgta
aacccactggaccgcagcggaatcacgcccaagggtcttgatgggccgagacccaatcaa
aaggagattcactctctccgagcattcctgctgctgtttgtcaaacagcttatcatgaag
gatcatggcgtaaaggaagacgaactgcagagtattctgaactacctgctcacaatgcat
gaggatgataatctgatggatgttctccagcttctggtggcactgatgtctgagcatcct
ggctcaatggttcaagcctttgatcagcggaatggaatacgggtcatctttaagctgctc
gcatccaaaagcgaagggattcgtgtgcaggcactcaaagtcttgggctattttctcaaa
tatttgtcaccaaagacaaagtcagaggtcatgctggctcacggcttgttctctctcctc
actgaacgattgatgctccactcgaaccagttcacagtcacaacatacaacgtgctcttt
gagattcttacggagcagatctgtactcaggtcattcacaaacagcacccagaccctgac
tccactgtgaagattcaaaacccacagatcctaaaagtgatagctgctcttttaaagaat
gctcctccaggagcagaaagcatggaagtacggcgtatctttgtctcggacatgatcaaa
ctcttcaacaacagccgagagaaccgcaggagtctgttgcagtgctcggtgtggcaggag
tggatgctgtctctgtgctttattaaccccaagaacagtgaggagcagaagatcacagag
atggtgtacgccatctttcgcatccttctttatcacgccattaagtacgagtggggcggc
tggcgcgtgtgggtggacacgctctccatcacacactccaaggtcacctttgagcaacac
aaagagaatctggcccgcatgtttctggagtaccagcgaatgggttctgagggaggatct
gaaagcagaatcagaacaatctctggtgcagaagattctcagttccttgcctcggccaat
ggtgagctgcaagctgaggagaccgctccatcaactgtaattgagctacgcgtggaggag
caggtcagtgatcagcctagagacagtgaggagatgcggacccagatccctgttacagtg
tccaacattctggccagagatgaggaagagagacaggcagacaccgttgctacctcacca
gagacagaagaagggaataaagatgaacaggacactttgagagaaccagaaaaggataat
gaaatgaaaaatatggaagacaatcataaaatggaggctaataaggatggagaacctgag
agagtggaaggagttgaggctgacatcacgatgactgaaggtagagttaaagagaaggag
aaatcagatctgagtgtaacagatgatgctgacagtacacagactgcaaacgacaaggat
gccaaagttgaaactgaagctgtgaagatgtcagatgaagatgatggtaaaacaagcaat
actgaaactgaaccaaatactcaggtacaagatacagagaaaggacctggagattcttct
cctgaagctgtaaaggaagccaaagtggaagaaaccactgatgcttcttctgaagtttca
gcccaacaggagactagcatgactgatgcctcagacatgaatgaagatagccctgatgtt
tcctcagtcagcaacttcgtgaaagtcagtgatgatagcacagaggagtcctcatttgtt
tcagctacagctggtgagacggatgaccatggtgttgaaaaggaagatgatggaatggag
gaagaagataagctagaaactgaaaaagatgagaagtcaatggaaaatgagaaggcagag
gaaaccaaggatacaccggctcccatggtggaggttgatttaaaccaaagcacctccacc
gatgagaccaagcttcacacagaggctacagaaggtcatggtgctcttgaggcagaacaa
gcagcagaagtaagtcctccagcagaggttagccctagcactgagagtaactcagaggat
ccaggagctaaccaagacactctgaaggcagcaggaactgagagctcagcgactaaaacc
aaagagattaaaattgctaggctggatgtgtcaagtgtggcctcagacacagagagacta
gagctgaagcacacctcgacaacaaacgtgagctcagatcaagcagccgcctcaagcccc
tcaggtcagggcaatgagggctcgtcttcagcacggtccactatgttccgtatcccagag
ttcaggtggtctcatatgcaccagcgtcttctaaccgacctgctgttctccatcgaaaca
gatgtgcagatgtggagaagtcattcgactaagacagttatggactttgtgaacagcagt
gagaatgtggtgtttgtgcacaacaccgtccatctcgtctctcaggtggtggacaacctc
atcatggcctgtggaggaatccttcctctgctgtctgcagccacctcctcttcgcacgag
ttggagaatattgagccatctcacggtttggctgtggaggcgtcactgatgttcttgcag
aggctgatcagtctcgtggacgtgcttatcttcgccagttcactcaacttcactgaaatc
gaagcagagaagaacatgtcttctggaggaatcctaagacaatgcctacgtctggtgtgt
gcgatggctgtgagaaactgtctggaatgtcagcagcacaccctgggtaagtctggtgca
gagagcagccgtggacagcaaagccttctgggagccgccaagtctataccagcacagagt
cctgtggacattgtgacaggagggatgtctcctatcagagatttagaccggcttctgcag
gacatggacatcaatcgtcttcgtgctgtagtgttcagagacattgaggacagtaaacag
gctcagtttctagccctcgcagtggtctacttcatctctgtactcatggtatccaaatat
cgagatatcctggagccacacaatgacaaaagacaagcccagcgctcacagtctatcagg
agcacagagagtgttcagtctgatctcgagaacggtttgtctcctcatcgtcgagactct
agcattgagggtgagaagacttcagcaatccccagtgatgctgagacacggaccggcccg
gacgctgtatcagaagccctgtctactttgtcctctgaagtcaggagaggttctgaggtc
actaatagagacagcaaaggaaaaaacgtcaatgtcaaggacattttgagaagtctcgtt
agtgcaccttctgatgacatcatggtggaccccagccttataccgcctgggtttctgggt
gcagtgggcgatgtctcccgtgaccagtccgtccagttccactcctttgacaggagtgtt
gttgtggcacccaagaaagcgggcggggctccctcaccaggaatgagcacagtctccgca
gctgcatccgtcccatcagccactgctgcatcctcaggtggaactccagttgacagcgtg
tcagtggtgtctgcaggagatactgttcagagcacagagtccgccccaggaggaacctcc
accagctccaacctgccatctgtccctgccatatccccaatgacccagagctccgccccc
agcatgagtatctcagagagattggaacatgctctggagaaggcagctccgttactcaga
gagatttttgtggatttcgcaccattcctctctcgcacactgctgggcagtcacggacag
gagctactcatcgagggcaccagtcttgtgtgtatgaagtccagcagttctgtggttgaa
ctggtcatgctgctgtgttctcaggagtggcagaattccatccaaaagaatgcgggtttg
gccttcatcgagctggtgaacgagggcagactgctgagccacaccatgaaggaccatctg
gtgcgtgtagctaatgaggccgagttcattctgagccgccagagagcagaggacatccac
aaacatgctgagtttgagtcgcagtgtgctcagtatgccgctgagaaacgtgatgaggag
aagatgtgcgatcacctgatcagggccgccaagtaccgggatcacgtcacgtccacccag
ctcatccagaagattgtaaacatcctcacagacaagcacggtgcttggggctgctctggt
ttcagcagaccgcgggagttctggcgcctggactactgggaggatgacctgaggagacgt
cggcgcttcatcaggaacccgtttgggtccacacactctgaggccacgctcaaggctgca
gcagagcatgctccagaggaggacgtgctgaaaggcaaacagtccatcaggagttcagtg
ctggggaagcagaactcagagagtgagctgctcttggaggacgatgatactctctcatcc
ttggaggagaaagagttggagaatctcacagggcctgttaacctgagcaccagcgcacag
ctggttgcacccgctgtagtggtaaaaggcacactgtccatcacggcactagagttatac
tttgaggtggatgaagaagacccgagttttaagaacattgatcccaagattttagcctac
acagaaggcttgcatgggaaatggcagttcacagagatcagagcaattttctctcggcgc
tatctgctacagaacacagcgctggaggtcttcatggccaacaggacggcgatcatgttg
aacttccctgatgcggccacagtgaaaaaggtggtgcattgtctccccagagttggagtc
ggcacgaattttggccttcctcagaccaggcggatctctctggccagcccgaaacagctc
ttcaaggcctccaacatgacccagcgttggcaaagacgagagatctccaactttgagtac
ctcatgttcctcaacaccatttcaggccgtacatataatgatctgaaccagtatcctgtg
ttcccctgggtaatcactaactacgacagtgaagatctcgacctcaccctgcccagtaac
tacagagatctgtccaagcccattggtgcactcaacccaaagagagctgcattcttctca
gaacgttttgaaacatgggaggatgagcaggtgcccaaattccactacggcacacactat
tccacctccagctttactcagatgtggctactcaggactgagcctttcacaacattcttc
ctgaatttccaaggtgggaaatttgaccatgcagatcgcactttctcttcagtgtccaga
gcctggagaaactgccagagggacacatctgatgtgaaggagttgatccctgagttctat
tacctcccagagatgtttgtcaactccaataattacaacctgggagtgatggatgatggg
acggtggtgtcagatgtggagctgccgccttgggccaagagtcctgaggatttcgtacgc
atcaaccgacttgctctggagagtgagtttgtgtcctgtcagctgcatcagtggattgat
ctgatatttggatacaagcagcagggacctgaggccatcagagctctcaatgtcttctac
tacctgacttatgaaggagcagtcaacctcagctccatatctgaccccatgctcagagag
gctgtggagtctcaaatcagaagttttggacagacaccctgccagctgctaattgagccc
cacccgccacgcagctctgccatgcaggtgtatcttcttctgcagaccccgctgatgttc
acagagcagatgcagcaggatgtcatcatggtactcaagttcccgtccaactcgcctgtc
acccacgtggccgccaacacacagtcaggcctgaccaactcagcggtcatcaccgtcacc
gccaaccgcctcttcgctgtcaacaagtggcacggtctcactggtcatcaaagctcttct
gtgcaggaccagcagtaccagttaccggttgagattgaccctttgatagcctataatgtg
ggcactcacaggaggcagatctcagatctgttagatcagagcatccaggtaaacgctcag
tgttttgtcatcacagctgacaactgcttcatcctgctgtgtggattctgggacaagagc
ttccgcgtctactccactgatacaggtaaactgacacagattgtgtttgggcatcttgat
gtggtgacctgtctggctcgctcagagtcgtacattggtggagactgttacgttctctct
ggctccagagatgccacactacttctctggtactggaacggcaagcacagcagcattgga
gagaatcctgggacagagtttgtgaatccccgggcaatcctgacaggtcatgattgtgag
gtgacgtgtgcgagtgtttgtgcagagctgggactggtcatcagtggctgcagagagggt
ccatgtcttgtccactctatgaacggtgacctgttgaggactctggaaggtccagacggc
tgtgtgcggccacgtttggttatgtcctccactgagggtcactgtgtcatttattatgac
aagggccacttctgtgtgttcagcatcaacgggaaactactgggacatatggaggtggaa
gacaacatcaaggcgatgctgctaagtaaagatggacagtatctgctgtctggaggagat
gcaggagttctcagcgtgtggcagattcatgatctcaagcagctcttcacttaccctgga
tgtgatgctggaatacgttctatggctatgtcacatgaccaaagatgcatcatcactggt
atggcgtctggtagcattgttctgttctacaatgatttcaacagatggcaccacgaatac
caaactagatactga
DBGET
integrated database retrieval system
