KEGG   Ctenopharyngodon idella (grass carp): 127511563
Entry
127511563         CDS       T08802                                 
Name
(RefSeq) optineurin
  KO
K19946  optineurin
Organism
cide  Ctenopharyngodon idella (grass carp)
Pathway
cide04137  Mitophagy - animal
cide04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:cide00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    127511563
   04137 Mitophagy - animal
    127511563
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cide04131]
    127511563
Membrane trafficking [BR:cide04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab associated proteins
    127511563
 Protein recycling
  Rab GTPases and associated proteins
   Other Rab GTPase associated proteins
    127511563
 Autophagy
  Mitophagy
   PINK1-Parkin associated proteins
    127511563
  Xenophagy
   Cargo receptors
    127511563
SSDB
Motif
Pfam: CC2-LZ NEMO zf_C2H2_10 FlaC_arch PUMA_CC CC_Liprin_beta TMF_DNA_bd CCDC39 MIP-T3_C BST2 zf-C2H2 ODF2_C EDR4-like_1st
Other DBs
NCBI-GeneID: 127511563
NCBI-ProteinID: XP_051748432
LinkDB
Position
4
AA seq 523 aa
MASGSSMMNGDISHPRGSGPGNVGSLEETLQQMNTLIKENRELKEALKQTNLSMKERFEG
LSAWKEKQKEERDFLEQRLEEAKTRLTTVDAENEMLKKRVEELEKSGAECLHTELEAMRG
QIGRLQAEKNDLVALNSELQLKMGQGSPRDSFIEIRIAEDDLKVTRDLPDTQMEPSAFCM
PKAESEEQTVRQLLHSLRAETDAKERLQLALQEARGRIAELENRLDHADSSAQTSLPCTT
EINSSAEVKNLEDQLLKLCNELKQAQIKLDDAENMKRNLQDRCKDLEQDLGTLKTQLGEK
QKVQAENDCLKVQMESLQAAIKLEQKKTQDEKNNLNQLKDAYTKLFEDYNELQEEKKKKE
GSVSREEYDDLQTRFATAEKALADKQLKIDEMKMEIFQKEKELETISVFQAQAEIYSSDF
YAERAAREKIHEEKERLATQLEYVKKQNSQLQEEMESLGRHSMSEMQRRHVPRGANPQGP
ASPHHLQGGDWQQQNIPEHACPKCGEVLPDLDSLQIHIMDCII
NT seq 1572 nt   +upstreamnt  +downstreamnt
atggcatctggttcatcgatgatgaacggggacatcagtcacccacgcgggtccggcccg
gggaatgtgggcagtttagaggagaccctccagcaaatgaacactctgatcaaagagaac
agagagctgaaagaggccctgaaacagacaaacttgtccatgaaggagagatttgagggt
ctgtcggcatggaaggagaagcaaaaggaggagagagactttctggagcaacgattagag
gaggccaaaaccagactgactactgtggatgcagagaacgagatgctgaagaaacgagtg
gaagagctggaaaaaagtggagccgagtgtttacacactgaactggaggcaatgagagga
cagattggtcgtcttcaggctgagaagaatgatctggtagcattgaactccgaactccag
ctcaaaatgggacaaggttcacctagagactccttcattgagattaggatagctgaagat
gatttaaaagtgaccagagatttgcccgatacacaaatggagccatctgctttctgcatg
ccaaaggctgagtcggaggaacagacagtgaggcagctgcttcactccctcagagcagag
actgatgcgaaggagagactgcagctagcgctccaagaggcacgtgggagaattgcagag
ttagagaacagactggatcatgctgacagcagcgcacagacatctctcccttgtacaact
gaaatcaactcaagcgctgaggtgaagaatctggaggatcagttgctgaagctctgcaat
gaattgaaacaagctcagatcaaactagatgatgctgagaacatgaaaagaaacctgcaa
gacaggtgtaaagatttggagcaagatctgggcaccttaaagactcagcttggagaaaaa
cagaaggtccaggctgagaacgactgtctgaaggttcagatggaaagtctccaggctgct
attaaactggaacagaagaaaactcaggatgagaaaaacaacctaaaccagctgaaagat
gcctataccaagctgtttgaagactacaatgagcttcaagaggaaaagaagaagaaagag
ggtagtgtatcacgggaagagtacgatgacctccaaaccaggtttgctacggctgaaaag
gcgctggcagacaaacagctgaagattgatgagatgaagatggaaatcttccagaaggaa
aaggaactagaaactatctctgttttccaggctcaggcagagatatattcctctgacttc
tacgcagaaagagcagctcgggagaagattcacgaggaaaaagagcgtttggccactcag
ctggagtatgtgaagaaacaaaacagccaacttcaggaggagatggaatcacttggcagg
cattccatgagcgagatgcaaaggagacatgtgccacgtggggccaatccacaaggcccc
gcatctccacaccatctgcaaggaggcgattggcagcagcagaatattccagaacatgct
tgtcccaaatgtggggaagtcctacctgacctggactctctgcagatccacatcatggat
tgcatcatctga

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