Ctenopharyngodon idella (grass carp): 127512018
Help
Entry
127512018 CDS
T08802
Name
(RefSeq) zinc finger and BTB domain-containing protein 20
KO
K10501
zinc finger and BTB domain-containing protein 20
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127512018
04121 Ubiquitin system [BR:
cide04121
]
127512018
Transcription factors [BR:
cide03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
127512018
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
127512018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTB
zf-C2H2
zf-H2C2_2
zf-C2H2_4
zf-C2HC_2
BTB_KLHL33
zf-C2H2_15
Zf-C2H2_ZNF451_2nd
zf-met
zf-C2H2_6
zf-C2H2_11
BolA
zf-Di19
Motif
Other DBs
NCBI-GeneID:
127512018
NCBI-ProteinID:
XP_051748471
LinkDB
All DBs
Position
5:4207040..4290207
Genome browser
AA seq
693 aa
AA seq
DB search
MTERIHHINLHNFSNSVLETLNEQRNRGHFCDVTVRIHGSMLRAHRCVLAAGSPFFQDKL
LLGYSDIEIPSVVSVQSVQKLIDFMYSGVLRVSQSEALQILTAASILQIKTVIDECTRIV
SQNVGIAGSGSFSVVPGDSGQETPRGTPESGTSGPSSDAESGYMQTSHQSLDRVYSSLYS
SCPGLGLQNGTRGNRSHYASSAVTASYDSPLQLQQKEGGQDPAWITRIHERSQQMERFLA
TSETTHCRKQPRPVRLHTGDIHIKQEQGDEYNCYGLEDCREDSEQLECIESEPKGESFDS
GVSSSIGTETDSVEQPFMSGFARDNCPNKSQQGERGTPVQIEVNDSSPEQTQESVEDGSG
NGPSQESGELGIHQPPQANLATPQSMPGGPYLRPGEPLTSNLRMPLTLTSNTQVMGTAGN
TYLPTLFATQSASDNKPFLFSLPQSIGSQQPQFVAVPSPNMPPFPSGLTVPPGGSQQQGG
AAVGQHGEKKPYACTLCCKTFTAKQNYVKHMFVHTGEKPHQCSICWRSFSLKDYLIKHMV
THTGVRAYQCSICNKRFTQKSSLNVHMRLHRGEKSYECYICKKKFSHKTLLERHMALHST
GTGVSGVSAAGSAGGPASIPVPMAVPEPGAGVVALAMPVGAGGAGGGVGSTGVGVAAEAS
CQEGTTYMCSVCPVKFDQIEHFNDHMRKHVSDG
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaacgcattcaccacattaatctccacaactttagcaattctgtacttgagacc
ctcaatgagcagcgaaaccgcgggcacttctgtgacgtgactgttcggatccatggtagc
atgctgcgagctcaccgttgtgtgctggctgcaggcagccccttctttcaggacaagctg
ctcctgggctacagtgacatcgagatcccctctgtggtttctgtacagtccgtccagaaa
ctgattgacttcatgtacagcggcgtgctgcgggtctcccagtccgaggccctgcagatc
ctcacagctgccagcatacttcagatcaagaccgttatcgacgagtgcacccgcattgtt
tcacagaatgttggcattgctggatctggcagcttttccgtcgtcccaggtgactcgggg
caggagacaccacggggaactcccgagtctggcacgtccggtcccagtagtgatgccgaa
tcaggctacatgcaaacatctcaccagagccttgaccgcgtttattcctcgctttattcc
agctgtcctgggttgggcctgcaaaacggtacccgtggaaatcgctcccactatgccagt
tctgcggtgaccgccagctacgactcaccccttcaactacagcagaaggagggagggcag
gaccctgcctggatcacacgcatccatgagcgttcgcaacagatggagcgcttcctggcc
acgtcggagactacacactgccgtaaacagcctcgtcctgtgaggctccacacaggtgat
attcacatcaagcaggaacaaggggacgagtacaattgctatgggcttgaggactgtcgt
gaggacagcgagcagctggagtgcatcgaaagcgagcccaaaggcgagagcttcgactct
ggcgtcagctcttccattggcacggaaaccgattctgtcgaacagcctttcatgtctggg
tttgctcgagacaattgtccgaataaaagccagcaaggtgagcgtggaaccccagtgcag
atcgaggtcaacgattcatctcccgagcagacccaagagtcggtcgaagatggtagtgga
aacggtccttctcaagagagtggtgagcttggaatccatcagccgcctcaagccaaccta
gcaacaccccagtccatgccaggtgggccatacctgcggccaggtgagccacttaccagc
aacctgcgcatgcccctcaccttgaccagcaacacccaggtaatgggaaccgcaggcaac
acgtacttgcctacactctttgcaacccagtcagccagcgacaacaagcctttcctcttc
agtctgccccagtccattgggagtcagcagccccaatttgtggcagtgccctctccgaac
atgcctccattccccagtggactgacggtgccacccggtggaagtcaacagcaaggtggt
gcggcagtgggacagcatggggaaaagaagccctacgcatgcactctttgttgtaaaacc
tttactgccaaacaaaactacgtcaaacacatgtttgtgcacacaggtgaaaagccgcac
cagtgcagtatctgttggcgttcgttctcgctgaaggattatcttatcaaacacatggtt
acacatacaggcgtccgagcataccagtgcagcatctgcaacaaacgcttcacccagaag
agctccctcaacgtccacatgcgcttgcaccgcggagagaagtcctacgagtgctacatc
tgcaagaaaaagttctcccacaagaccctgctggagcgccacatggccctgcacagcacc
ggaaccggggtctccggggtcagtgccgcaggaagcgccggaggccccgcatccatcccg
gttccgatggccgttcctgagccgggagcgggagtggtggccctcgccatgccggtggga
gcaggcggagcagggggcggagtcggaagcaccggagtgggtgtcgctgcggaagcaagc
tgccaggaggggaccacctacatgtgctccgtgtgccctgtcaagtttgaccaaatcgag
cacttcaatgaccacatgcgcaagcatgtctccgacggataa
DBGET
integrated database retrieval system
