Ctenopharyngodon idella (grass carp): 127512091
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Entry
127512091 CDS
T08802
Name
(RefSeq) ARVCF delta catenin family member b isoform X1
KO
K28154
splicing regulator ARVCF
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cide03041
]
127512091
Spliceosome [BR:
cide03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
127512091
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_2
HEAT
HEAT_EZ
Cnd1
Atx10homo_assoc
Motif
Other DBs
NCBI-GeneID:
127512091
NCBI-ProteinID:
XP_051748652
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All DBs
Position
5:complement(27478600..27616311)
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AA seq
998 aa
AA seq
DB search
MEEYDVPSAASILASVKEQEARFERLTRALEEERRNVSLQLERGSLPSDRLVGGTTGGSN
QPLAWQQMVMQEQSPSNQTSLAMMQEPQEVVEETVTIEEDPGTPTSRVSVVTSEDGTTRR
TETKDNVTNMKVTKMVKTVTTRTVRQVPMGPDGLPLPEGSSPLGSYTDSIDRRYMKNGER
FITPQATSTLTRSYNNYSDSYNDTPDSQFRHYALHDGYGDMPDNYGSLSRGVNYRPYRPY
MPTGYRPENSYTLPIRKDDYGHVAQPQVPMGSSTVDLNRSQPERFQPEPYGLEDDRRSLG
PDDEEPYDLEPDYSTANRRTLPGRTIREPLRNGPRMRGYEDPIEAELIDERHPYIHGMYP
APLAQPERGSMASLDRMGGRRSPSIDSIRKDPRWRDPDLPEVIAMLGHPIDPVKSNAAAY
LQHLCYENDKIKKDVRQLKGIPVLVGLLDHPKAEVHRKACGALRNISYGKDHDNKVAIKS
CDGIPALIRLLRKTNDMEVRELITGTLWNLSSYEPLKMVIINHGLQTMTNEVIIPHSGWE
HEPNEDSKPRDAEWTTVFKNTSGCLRNVSSDGAEARRRLRECEGLVDALLHALQSAVGKK
DMDNKSVENCVCIMRNLSYHVHKEVPGAEKFQDPSALQAPGSTGTQRKKKDDAGCFGGKK
AKEEWFNQGRKNGEHDKNYDTLDLPKRTEPTKGFELLYQPEVVRLYLSLLTESQNYNTLE
AAAGALQNLSAGQWTWSNYIRATVRKEKGLPILVELLRSDSDKVVRAVAIALRNLSIDRR
NKDLIGSYAMRDLVSNLPSGQQRPAKNLEEDTVVAILNTIHEIITDSSENARSLITAQAI
DKLVAINRTSQSARETKAASHVLQTVWSYKELRNTLTKDGWNKTHFQPIATGTPKGSKSC
KPGYDDTTLPLMEKNQGNRGCSGGDMIPMDELGPDGYSTIDQRDKDSKYKSSDGSSDLQE
REPLKNDTNRKHYIRSNRPTVSLVDACDVKPQPVDSWV
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atggaagaatatgacgtgccgtcagccgccagtatcttggcatcagtcaaagagcaggag
gcgcgcttcgagcgtctgaccagggcccttgaagaggaacgccgcaatgtctccttgcag
ctggaacgtggcagtctgccctctgatcgactggtgggcggcaccacaggcgggagcaac
caaccgctggcctggcaacagatggtcatgcaggagcagagccccagtaaccagacatca
ctggccatgatgcaggagccccaggaggttgtagaggagactgtaactatagaggaagat
cccggcacacccacctctcgtgtttctgtggtcacctcagaggatggaactacacgccgc
acagagactaaggacaatgtgactaatatgaaggtcactaagatggtcaagacagtgaca
acacggacggttcgacaggtgccaatgggtcccgacggccttcctcttccagagggctcg
tctccactggggagctacaccgactccattgatcggcgctacatgaagaacggcgagcgc
ttcatcacaccccaggccacttccaccctcacacgctcttacaacaattacagcgactcc
tacaatgacactccagacagtcagtttcgccattacgcccttcacgatggatatggagac
atgcccgacaactacggaagtctctcgcgcggagtcaactacaggccctatcggccgtac
atgcccactggataccggccggagaacagctatactctccccatccgcaaggacgactat
ggccatgtggcccagcctcaagtcccaatgggaagtagcaccgtggatctcaatcgttct
cagcctgagcgcttccaacctgaaccctatggcctggaagacgaccgccgcagtctcggc
ccagacgacgaagagccgtacgaccttgaacctgattattctacagctaaccgccgcacg
ctgcctggacgtaccattcgagagccgctgcgcaatggcccccgcatgagaggttacgag
gaccccatagaggctgaattaatcgatgaaagacacccttacatccatggcatgtacccg
gcacctcttgcccaacccgagagaggcagcatggccagtcttgaccgcatggggggccgt
cgctccccctcgattgacagtatccgcaaagatccacgctggagggaccccgacctgcct
gaggtcattgccatgctaggtcaccccatcgatccggtcaagtccaatgctgccgcctac
ctgcagcatctctgctatgagaacgacaagataaagaaggatgtcaggcagctgaagggg
atcccagtgctggtgggcttgctggatcaccctaaagctgaagttcatcgcaaggcctgc
ggagctctgagaaacatctcctatggcaaggatcacgataacaaggtggcgataaagagc
tgtgatgggattcctgctcttatccgtctgctgaggaaaaccaatgacatggaagttcgg
gaactcatcacaggaacactttggaacttgtcctcctatgagccactgaagatggtgata
ataaaccacgggcttcagacgatgactaatgaggtcatcatccctcattcgggctgggaa
catgagccaaacgaggactcaaagccacgagacgcagaatggactaccgtcttcaagaac
acatctggatgtcttaggaatgtgagctcagacggtgcagaggctcgcagacggttgaga
gagtgtgaggggctggtagatgccttgctgcatgcactgcagtctgctgtgggaaagaag
gacatggacaacaagtctgtggagaattgtgtttgcatcatgaggaacctgtcttaccac
gtgcacaaggaggttccaggggctgagaaattccaagacccctcggctcttcaggccccc
ggctcaactggcactcagaggaagaagaaagatgatgcaggctgcttcggaggaaagaag
gccaaagaggaatggtttaatcaagggaggaaaaacggagagcatgacaaaaactatgac
acattggacctacccaagcgcacagaacccactaaaggttttgagttactgtatcagccg
gaggtggtccgactctacctgtctctgctgacagaaagccagaactataacacgctagaa
gcagcggccggggctctacagaatctcagcgctggacagtggacatggtcaaactatatc
cgggcaactgtgcgtaaggagaaggggctgccaatcctggtggagctcttgcgctcggac
tcagacaaggtggtgcgagctgtggccatcgctctgaggaacctgtccatcgaccgccgc
aacaaagacctgatagggagttacgccatgagggatttggtcagcaacctgcccagcgga
cagcagcggccagccaagaacctggaggaagacacagtggtggccatcctcaacaccatc
catgaaatcatcactgacagctctgagaacgcccgctctctcattaccgctcaagcaatc
gacaaacttgtggccatcaacaggaccagccagtcagcaagggagaccaaagctgcttcc
catgtactacagacggtttggagctataaggagctgagaaacaccttgaccaaggatggc
tggaataaaacacacttccagccgatagcgactggtacccccaaaggatccaagagctgc
aagcctggctacgacgacactacactccccttgatggagaagaaccaaggcaacagaggg
tgtagcggtggggatatgatacctatggacgaactcggtccagatggctattcgacgatt
gaccagcgagacaaagactccaagtacaaaagcagcgacggctcgtcggatctgcaggag
cgggagccgttaaagaatgacacaaataggaagcactatatcaggagcaacaggccgact
gtcagtctggtggatgcttgtgatgttaaacctcagcctgttgactcctgggtctaa
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