Ctenopharyngodon idella (grass carp): 127512152
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Entry
127512152 CDS
T08802
Name
(RefSeq) LOW QUALITY PROTEIN: tenascin
KO
K06252
tenascin
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04510
Focal adhesion
cide04512
ECM-receptor interaction
cide04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127512152
04518 Integrin signaling
127512152
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127512152
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cide00536
]
127512152
Glycosaminoglycan binding proteins [BR:
cide00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
127512152
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
EGF_TEN
EGF_Teneurin
Fibrinogen_C
EGF_2
EGF_Tenascin
Fn3_Dep-1_3rd
Fn3_Dep-1_2nd
Pur_ac_phosph_N
DUF7949
EGF
fn3_2
EGF_PEAR1L
hEGF
CBM_4_9
SPE9_EGF_3rd
Motif
Other DBs
NCBI-GeneID:
127512152
NCBI-ProteinID:
XP_051748747
LinkDB
All DBs
Position
5:complement(40599995..40656805)
Genome browser
AA seq
2368 aa
AA seq
DB search
MWSGHLTVSCLVLATLMTLNQAGLVKKMIRHRREALTIPGIHNVTLPNSSRPVVFNHVYN
IKVPGSSLCSEDLESSGGSVLEEKAAPSVSKITDHTLDSSNQIVFTHRINIPKQACACTD
GLSDLKELLNRLETLESELSTLRQQCSTESTCCSAQVTGVVGTKPYCSGHGNYSTETCGC
ICDPGWKGPNCTLPDCPGDCSDQGRCVNGKCECFEGFTGEDCSLKTCLVDCGENGRCVDG
VCVCNEGFSGEDCMESDCPNNCLGRGRCVDSECVCVEPWTGFDCSELICPNDCYDRGRCD
NGTCYCDIGFTGEDCGALVCLNDCSGRGFCIDGRCVCNAGYSGEDCSSLTCPNDCNERGR
CFNGVCICDMGFHGEDCGKLSCPNNCNDRGRCIDGRCECDVGFQGHDCSELRCPNNCNNR
GRCVNGQCVCEEGFSGEDCSIKTCPSDCYGRGQCVDGKCICFADFTGEDCSELSCPNNCL
NRGRCVAGQCVCDEGFTGEDCSQKKCPNDCLGRGRCVEGQCVCQEGFEGQDCSVPTCPGN
CNNHGRCINGKCVCDEGFVGDACRERSCPNECNGAGQCVDGGCVCDEGYIGEDCSEVSPP
EDLTVTDVTTEKVNLTWKNEMLVTEFLVTYIPTSPGGLQLDFRVPGDRTSATVSELEPGI
EYLINVYAVLNNKRSVPVSARVATYLPQPEGLKFKSITDTSVEVLWDQLNFSFDGWELIF
RNTKEENGKIVNNLTPSETIFEQPGLGPGQEYEVTLSVIKNNTRGPETSSTVVTRIDSPG
QIDVSDVTDRSAVISWSRPVAQVDGFRVSYGPSTDPLVHRDVDLSAKDTQYSLEDLKPDT
EYRVSLSSRRGDVTSEPIFKSFTTGLDAPSDLKVVDQTDNSITVEWKNSRSSIDEYRIKY
GPIAGGAHGEDMFPRRAGDKTWATITGXKQYCCLKPGTEYGIGVTAVQNERESEPATTNA
LTDLDPPRDLEVRDSTETTLELVWKRPRAKISTYRLEFVSADGRREEIELPATATTYTLN
GLTPGMLYTVTLVVERGRRRSAPATVTASTASFTFYLANTFPELGSAKGTDDNVISFVPL
DNSESPFSGSGYEDSTGTLTVSNVTSDGFDLTWESNIHIGYDSYTVELKDFSGKWNKEVH
LHGEVNGTKIRGLRASTEYQVRLYGISDNQRSSLLEAVAVTAPKSTSPDVVALTVKTVST
MLPSLYKEVQPSVSTSTFLTEDFKAEASGDEFERPSQGPPSELKVTNVSRNSLRLSWSAP
DGAFDSFIVKLNSSSNKSKDHIIDVSGEARQVHVDGLTADMHYEITLYGMKESKKSQPVN
VHVKTEEQKPQIGSLSVSDVSWDSFNVSWTVEDGPAFDSFVIEVANSAGGPERQNLSVSG
DARSLWMSGLSPDTSYTITLYGVHQGSILGSIYIEEATDSAPVVGNLYVSNITSESFSIS
WNDTRGDIEGFILEIIDSSWQREPVEYNLSHSTQSYEITGLRPTTDYIAYLTGVIKGRRT
DSVSAVASTAAEPDLSGLVVSNITSDTVSLSWRTGEKAFDNFIVEVRESALPTQATGRTL
PAGARSTVLTGLRGDTRYQIKLYATFGGANTAALTTVVTTEPKPKLGPIVVSETLPSSLT
LSWSTLSGHFDGFAARITDREQLYDVVELRLSGTERNVTVMGLMDSTVYDIVFYGLSRGR
QTPSVYFNTSTASLPKVENLTISDITPYGFRVSWEADSSEGFSHFQVKVSDSGQLLEPQE
FVVPGNQTLLDVLGLITGIGYEVSVTGVSGNGLQSRPITTVAVTEAEPEIEHLFVSDVTP
ESFRLAWTAEDDVFDRFVVKVRDSRKLSHPREFVVPGDERTKVLTQLLGGTEYEIELYGV
TLEHRSQPVTAVARTGLGAPRELRFSDITDTSAVVYWSVPRAQPDSYRITYFPVQGGTPM
IVTVDGSQSQVSLTNLIPGEMYQVSVIALKGLEESEPVSDTLTTALDTPRSLTAVNVTDT
KALLLWQPAVATVDGYVITYSADTVPPISEQVSGNTVEYEMSSLAPATQYTVNVYAIRNR
QKSVPATTDFTTDADAPRDLVASNIQTESAVLTWKPPRAAITGYILTFEASDGDVRELNL
DPSVTSHTLSDLRSTTEYTVRLQAVSEDKRSKSISTVFTTVGMAYSNAKDCSEALLNGET
SSGPYTIYIAGDPKQPVQVYCDMTTDGGGWMVFLRRQSGKVDFNRNWKNYTLGFGDMNDE
FWLGLMNLHKITAAGQYEIRVDLRDGQESVFAVYDKFSIGDPRSRYKIQIGTYSGTAGDS
LSYHQNRPFSTYDGDNDIAVTNCALSYKGAFWYKNCHRVNLMGKYGDSSHSKGINWFHWK
GHEHSIPFAEMKIRPVNFRNLESRRKRS
NT seq
7107 nt
NT seq
+upstream
nt +downstream
nt
atgtggtcaggacacctgactgtcagctgtttggttttggccaccctgatgactctaaat
caagccggccttgtaaagaagatgatcaggcaccgacgggaagctctgacaattcccggc
atacacaacgttacccttccaaattcttcccgaccggtagttttcaaccatgtttacaac
atcaaagttccgggcagctctctgtgctcagaggatctggagtcttctggtggttcagtt
cttgaggagaaggctgcaccatctgtctcaaaaataacagaccacacattggacagcagt
aatcagatcgtcttcactcatcgcatcaacattcccaagcaggcctgtgcctgtacagat
ggactgtcggatctgaaggagctgctgaatcgattggagacgttggagagcgagttgtcc
acactcagacagcaatgcagcacagaatccacctgctgcagcgcacaggtcacaggtgtt
gtaggaacgaagccgtactgcagcggccatggaaactacagcacggaaacctgcggctgt
atttgtgaccccggatggaagggccccaactgtacccttcccgactgtcccggggactgc
agcgaccagggccgctgcgttaacggaaagtgcgagtgttttgaaggcttcacgggtgag
gactgcagcttgaaaacctgtctggttgactgcggtgagaacggccgttgcgttgatgga
gtgtgtgtttgcaatgaaggcttctctggggaagattgcatggagtcggattgccctaac
aattgtttgggacgcggccgctgcgttgatagtgagtgcgtctgcgtcgaaccctggact
ggcttcgactgctccgagctaatctgcccgaatgattgctacgaccgcggacgatgcgac
aatgggacctgttactgtgacataggcttcaccggagaggactgcggggcgctcgtttgt
ctgaacgactgctcaggacgaggtttctgcattgatggccgctgcgtatgcaacgccggc
tactctggcgaggactgttccagcttgacctgtccgaacgactgcaacgaaaggggacgc
tgctttaatggagtgtgcatttgcgacatgggcttccacggagaggactgcgggaagctc
tcgtgcccgaacaactgtaacgaccgaggtcgctgcattgacggccgttgcgaatgcgac
gtcggcttccaaggccacgattgctcagagctcagatgccccaataattgcaataatcgg
gggcgttgtgttaacgggcagtgcgtttgcgaagagggtttcagcggcgaggactgcagc
atcaaaacctgcccatcggactgttacggccgaggtcagtgcgtggacgggaagtgcatt
tgttttgcagacttcaccggcgaagactgcagtgaattgagctgcccgaacaactgcctg
aaccgcggacgctgcgtcgcagggcagtgcgtttgcgacgaaggcttcaccggagaggac
tgcagtcagaagaagtgtcccaatgactgtctcggccgaggacgctgcgtggagggccag
tgtgtttgccaggagggttttgaaggccaggactgctccgttcccacctgcccaggaaac
tgcaacaaccacgggcgctgcatcaacggaaaatgtgtgtgcgatgagggattcgttgga
gatgcctgtagagaaagaagctgtccgaacgaatgcaatggagcaggccagtgtgtggac
ggcggctgcgtttgtgatgaaggctacattggcgaggattgctcagaagtctcaccaccg
gaagacctgaccgtcacagatgtgaccacggagaaggtgaacctcacatggaagaatgag
atgctggtgacggagtttttagtcacgtacatcccgacgtcaccaggcggcctgcagtta
gacttccgagtgcctggagatcggacgtctgctaccgtctctgagctggagcctggaatc
gagtacctgatcaatgtttatgccgtcctcaacaacaagaggagcgttccagtcagtgcc
agagtggccacatatctaccacagcctgagggcctgaagtttaaatccatcactgatacg
tctgtggaggttttgtgggaccagctgaacttttcattcgacggctgggagctcatcttt
cgtaacacgaaggaagaaaacgggaagatcgtgaacaatctgacaccttccgagaccatc
tttgagcaaccaggactcgggccgggacaggaatatgaagtcactttgtccgtcataaag
aacaacaccagaggacccgaaacaagctcgactgtagttacaagaatcgattctccagga
cagattgatgttagcgatgtgacagacaggtcagcagtgatctcctggtccaggcccgtg
gctcaggtggatgggttcagggtgtcatatgggccaagcacagacccgttagtccatcgt
gatgtcgacctctcggccaaagacacgcagtacagcctggaagacctgaaacctgacact
gaatacagagtgtctctcagttctagaaggggagatgtgaccagcgagcccatctttaaa
agcttcaccacaggcctggatgcccccagtgaccttaaagttgttgatcagactgacaac
agcatcacagtggaatggaaaaacagccgctcatccatcgacgaataccgtatcaaatac
ggcccaatcgcaggaggtgctcatggtgaagacatgttccctagaagagcaggagacaag
acatgggccacaattacagggtaaaaacaatactgctgcctgaagcctggaacggagtac
ggcattggagtcacagccgttcagaatgaaagagagagtgagccggccaccaccaatgca
ctgacagatctggatccaccacgagacctggaagtgcgagactccactgaaaccacgctg
gaactggtctggaagaggcccagggccaagatctccacctacaggctagagtttgtctct
gccgatggccgacgggaggaaatcgagctgcctgctactgcaaccacctacactctgaac
ggcttgactcctggcatgctctacaccgtcaccctcgtggtagaacgtggacggaggaga
agtgctccagccactgtaactgcatccacagcatctttcactttttatctagcaaacaca
tttcccgagctcggttcagccaaaggcaccgacgacaatgtcattagctttgtgcctctc
gacaactcagagagcccgttctctgggagcggatacgaggattcgaccggcaccttgacc
gtgtctaatgtcacatccgatggatttgatcttacgtgggagtcaaatatacacattggc
tatgatagttacactgtagaacttaaagatttctcagggaaatggaacaaagaggttcat
ctccatggggaggtgaatggcactaaaatccgtggtctaagggcttccactgaataccaa
gtaaggctttatggaatatccgataaccaaagatcttcactactagaagcagttgcagtt
acagcaccaaagtctacctctcctgatgttgttgctttgaccgtcaaaactgtttcgaca
atgctaccaagcctctataaggaggttcagccatcagtctctacctccacttttttaaca
gaagattttaaagctgaagcctcaggtgatgaatttgagcgcccaagtcaagggcctcca
agtgaactaaaagtcacaaatgtaagcagaaatagtttgaggctatcatggtcagctcca
gatggagccttcgatagcttcatcgttaagctgaactcatcgtcgaataagtctaaagac
cacattattgacgtatctggagaagccaggcaggtccatgtagatgggctgaccgctgac
atgcattatgagattactttgtatggaatgaaggagagcaaaaaatctcaaccagtcaat
gttcacgtcaagacagaggagcagaagccgcagattggcagtctgagtgtgtctgatgta
tcttgggatagtttcaatgtgtcctggaccgttgaggatggccctgcctttgacagtttt
gtgattgaagttgcaaattcagcaggtggtcctgaaagacagaacctttcggtatctggt
gatgcacgtagtttatggatgtctgggctgagccctgacacgtcctatacaattacacta
tacggagtgcatcagggctcgatcctggggtcgatctacattgaagaagctacagatagc
gctccagtggttggcaatctgtatgtgtctaatattacatcagagagcttctccatttca
tggaatgacacgagaggagatattgaggggtttatcctggagattatagactctagctgg
cagcgggagccagttgaatataacctatcacacagtacacagtcatatgaaatcactggg
ctacggccgactactgactatatagcttacctcactggagtaataaagggaaggagaaca
gactccgtcagtgctgtcgcctccacagcggccgagcctgacttgtctgggctagttgtt
tcaaacattacctcagacacagtgtcgctctcctggcggacgggagagaaggcgtttgat
aattttatagtcgaggtgagagagtctgctttgcccacgcaggcgacggggcgcaccttg
cccgcaggtgcccgctccacggtgctgaccggcctcagaggagacacgcgatatcaaatc
aagctgtatgccaccttcggtggcgccaacacagctgccctgacaactgtagtaaccaca
gagcctaagcctaaattgggccccattgtggtgtctgaaacactgccgagtagcttgacg
ctgtcctggagcacattgtcaggccactttgatggctttgctgctcgtatcactgaccgt
gagcagctgtatgatgttgtagagctcaggctatcaggcacagagaggaatgttaccgtg
atgggtcttatggactctacggtctatgacatagtgttttatggtctgtctcgtggccgt
caaactccatcagtttacttcaataccagtacagcgtcattacctaaagtggaaaacctc
accatttcggatattaccccatacggatttcgggtgtcctgggaagcagattcctctgag
ggcttcagccattttcaggtaaaggtgtcggactctggccagctgctggagccacaagag
ttcgtagtgccaggaaaccagaccttactggatgttttgggcctgattactggcattggc
tatgaggtcagtgtgaccggggtgtcagggaatgggttacagtctcgtccaatcaccaca
gtggctgttacagaggcagaaccagagattgagcaccttttcgtgtcggatgtcacccct
gagagtttccggctggcctggactgcagaagacgacgtttttgatcgatttgtggtcaaa
gtaagagattcgagaaagctctcccaccctcgagagtttgttgtgccaggtgatgaaaga
accaaagtgttaacacagcttttggggggaactgaatatgaaattgagctttacggtgtc
acgttggaacatcgctcccaacccgttactgctgttgcgagaacaggccttggagctcca
cgcgaacttcgtttctctgacatcacggatacatcagctgtggtttactggagtgtaccg
cgtgcccaaccggactcctacagaatcacatacttcccagtccaaggaggtactcccatg
atcgtgacggtggacgggtcacaatctcaggtttcgctaacaaatctgattcctggagag
atgtatcaggtgtcagttattgcattgaaaggtctggaggagagcgaaccagtgtccgac
acacttactacagccctggatacgccacgcagcctgactgctgtcaatgtcactgacacg
aaggcgctgttgctgtggcaacctgcagttgcgactgtggatggatatgtcatcacatac
agcgcagacactgtgccaccgatatcagagcaggtttctggcaacactgtagagtatgag
atgagttcactggctccagcaactcaatacacagtcaatgtttatgccataagaaaccga
cagaaaagtgttccagcgaccacagacttcacaacagatgcggatgctccgcgtgatctg
gttgccagtaatattcagacagaaagcgctgttctcacctggaagccgccccgggcagcc
atcaccggctatatactgacctttgaagcatctgacggggatgtcagggaattgaatcta
gacccatctgtcacctcacacactctatctgatctgagaagcaccacagaatacactgtc
agactgcaggccgtctctgaggacaagaggagcaagagtatcagcaccgtcttcaccact
gttggcatggcctacagcaacgccaaggactgctcagaagctctgctgaacggagagacg
tcatccggtccgtacaccatttacatagccggagatccgaaacagccggtccaggtctac
tgcgacatgaccactgacggtggaggctggatggtgttcctacggcgtcagagcggcaag
gtcgatttcaacaggaactggaagaactacactctaggattcggtgacatgaacgatgag
ttttggctcggactgatgaatcttcacaaaatcacagcagctggtcagtatgagatacgt
gtggacctgcgtgatggacaagagagtgtgtttgctgtgtatgataaattttccatcgga
gaccctcgttctcgctacaaaatccagattggtacatacagtggtactgcaggcgattcc
ttgtcgtatcaccagaacagacctttctccacttatgacggtgacaatgacattgccgtc
accaactgtgccctctcctacaagggagcgttctggtataaaaactgccatcgagtgaat
ctgatggggaaatatggagacagcagtcacagcaaaggcatcaattggttccactggaaa
ggccacgagcattcgattccatttgcggagatgaagatccggccagtaaatttcagaaac
ttggaaagcagacggaaaagatcatag
DBGET
integrated database retrieval system
