Ctenopharyngodon idella (grass carp): 127512155
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Entry
127512155 CDS
T08802
Name
(RefSeq) zinc finger CCHC domain-containing protein 8
KO
K13128
zinc finger CCHC domain-containing protein 8
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cide03041
]
127512155
Spliceosome [BR:
cide03041
]
Complex C
Other components
Complex C specific factors
127512155
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PSP
KASH_CCD
Knl1_RWD_C
zf-CCHC
Herpes_BLRF2
CCDC113_CCDC96_CC
Motif
Other DBs
NCBI-GeneID:
127512155
NCBI-ProteinID:
XP_051748754
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All DBs
Position
5:4512943..4522003
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AA seq
709 aa
AA seq
DB search
MAAVDFGDSELFDQFEEKAPAHIRMIDEGDDEEGESSDRLRELRQTLEVCEETIERLNAE
NEELKRKLNILSRPTGIKIADSKTDGPLCQVNYGNSIISKQCRKEIEDFIYCLVQKHLHE
CNNDKEGSALHVNPHHSSFVMEESYKAKTSSDSKHIKNAFSIIGSVLYFTNFCVDKLGQP
LLNENPQLTEGWEVPKYQQIFGQIIALEGQEVQIKEKRPKPCCFNCCSEGHQLRDCPEPK
DMARINEKRKEFSQNSNQSNQRYHAEEVEERFAKYKPGIMSQDLLDALGITTNTLPPFIY
RMRELGYPPGWLKEAEMENSGLMLYDGSNDGDENNPSQKISYDVSKLVDFPGFNVSIPPN
IRDDYRSFGSIPMQPQQWKQNFAAFLSSTFPTATSCSKRRHESESTPQKTKKWRSNSEQT
HQASDMEIESDHDVPQMRPDGFQFHPPLPPGTSSMSVPPPLPLGTPPTTPPVPKGTPPAT
PPTSYSPSTQVRGMMEGEESEDGLSLEELEEQQRLLWAALEKADTTTNSDSEAGASETPV
PSSPSVVTSLRLDTEEEGEKMEDSSHAYEIKSTPSSPADPVTNCEDETIEKTTCEGQEKH
SINENTIDLSDIIVLDEIYEENSNHDATNGTSASPQISTQESNAQVADDTEEPVINKVAF
VPHRSRFAAGIIPFEDTPEFTEVAEATGVYLKIRDLLKGSPRNQAKNKK
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atggctgcggtggattttggagattcggaattgttcgaccaattcgaagagaaagcgcca
gcgcacattcgtatgatagatgaaggtgatgatgaagagggtgagagttcagatcgactc
cgggagcttcgccagacattagaagtgtgcgaagaaacaatagagcgtctgaacgcagag
aatgaggaactgaagagaaagttgaacatattaagtcgtcctacaggtataaaaatagca
gattccaaaaccgatgggccactttgtcaggttaattatggaaacagcatcatttccaag
cagtgtcggaaagaaattgaagacttcatctactgtcttgtccagaaacacctacatgag
tgtaacaatgataaagaaggctctgctcttcatgtcaacccacatcattcaagtttcgtc
atggaggagagctataaagcgaagacttccagtgactccaaacatataaaaaatgctttc
agtataatagggagcgttttatacttcaccaacttctgtgttgataaacttggccagccg
ctgctgaatgaaaacccccaactgactgagggatgggaagttcccaaatatcagcagatc
tttggccagatcattgccctcgagggccaagaggtgcagataaaggagaaaagacctaaa
ccatgctgttttaactgctgttctgagggccatcaactgcgagactgtccggagcccaaa
gatatggctcgtatcaatgaaaaaagaaaggagttttcacagaacagcaatcagagcaac
caacgctaccacgcagaagaagttgaggagcgatttgcaaagtacaagccgggaataatg
agtcaagacctccttgatgctcttgggattaccacaaacacccttcctccattcatctat
cgcatgagggagctcggttacccgcctggctggttaaaagaggcagaaatggaaaactca
ggcctgatgctctatgatggatcaaatgatggagatgaaaataaccccagccaaaagatc
tcttatgatgtctccaagctggttgactttcctggcttcaatgtctctataccacccaac
ataagagatgattacaggtcattcggttccattccaatgcaacctcagcaatggaagcaa
aattttgctgcttttttaagcagtacctttccaacggccaccagctgcagtaagaggcgt
catgagtctgaatcaacaccccagaagacaaagaaatggagatctaattcagagcaaaca
caccaggcatcggatatggagatagagtcagatcatgacgtgcctcaaatgagacctgat
ggtttccagttccacccaccactccctcctggtacttcgtccatgagcgttcctccgcct
ttaccgctgggaacgcctccaaccacacctccagtccctaagggaactccaccagcaact
ccacctacaagttattctccatccacccaagttagggggatgatggagggggaagagtca
gaagatgggctgtctctggaagaactagaggagcagcaaaggcttctttgggctgccctt
gagaaggcagatactacaaccaacagtgattctgaagcaggagcttctgagacccccgtc
ccaagttcccccagtgtcgtcacttcgcttaggcttgacaccgaggaagaaggagaaaag
atggaggactcgagtcatgcctatgaaatcaagagcacaccatcttcacctgctgatcca
gtaactaactgtgaggatgagaccatagaaaaaacaacctgtgaaggacaggaaaaacat
tcaattaatgaaaacacgatcgacttgagtgatattatcgtcctggatgaaatttacgag
gaaaacagtaatcatgatgcaacaaatggaacttcagcctctccgcagataagcacacaa
gagtcgaacgctcaagtggctgatgacacggaggaacctgtcataaataaagtagctttc
gtcccacaccgtagcagatttgctgcgggaataattccttttgaggacactcctgagttt
acagaggttgctgaagcaacgggggtttacctcaagattcgagatttactaaaaggctct
ccaagaaatcaggcaaaaaacaagaaataa
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