Ctenopharyngodon idella (grass carp): 127512175
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Entry
127512175 CDS
T08802
Name
(RefSeq) nucleolar protein 6
KO
K14544
U3 small nucleolar RNA-associated protein 22
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
127512175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cide03009
]
127512175
Ribosome biogenesis [BR:
cide03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
127512175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrap_D5
Nrap_D4
Nrap_D2
Nrap_D3
Nrap
Nrap_D6
Motif
Other DBs
NCBI-GeneID:
127512175
NCBI-ProteinID:
XP_051748797
LinkDB
All DBs
Position
5:complement(15322455..15339171)
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AA seq
1149 aa
AA seq
DB search
MKKKWKESSLTEEKMEEPDNIQNEEGKEKKSSKQSEDPKRKAKDTVSDAGVLRPLKLSKK
ELYKAPTVEELNQLKEAENLFHCSILKMQMEELLKEVSLSEYRKKLVDSFVKEVTDFLQS
VPETEVVELDDLSWLPGVEVPFLLVPPTAKGKFHMEPPASINVVGSYPLGTCIKPRVIVD
LAVTIPASILHPMDAINQRYPRKRALYLAGLAQQLCFSEAVGSLNYSCLHGNRLRPVLLL
KPPGKDSSKVTLRIHAIPPPDFLKPSRFHPQKNNIRTEWFTGVANKQQESSEPATPHYNS
TVLGDHLPLSHLQFLSAISAQCPAFGEGVALLKVWLRQRELDQGAGCFCGFHASMLIAYL
LSTHKVGKSMNAYQLFRNAMHFFASTDLTENGITLAKNPDSKAPSLQEFHAAFSVVFVDP
SGHLNLLADMTAFTYKQIQHEASLSLKFWDDPTIDGFHALLMTSKAMIRTYDNVFQLSEL
VNLQASCKKLSLLNELMDHSGNYVLSALPFILSLLQRGLGERIYLLAHSLPQDPEWPVDS
APPKHKDQPPLSIGLMLNLERALSVLERGPPADNPKAAEFRQMWGSRSELRRFQDGAITE
AVLWSGNSTCQRRLILLEIITYLLQLHADIPESCVRFVGGHLDDIIKVNKEICTTGEEES
LKVVQAYDDLSRKLWQLEGLPLSITSVQGAHQALRYTQVFPPVPVKLNYSFFDKKKNRLG
LVPQEDKPCPYYITPIKVIVHMEGSGKWPSEHLAIRHIKAAFHICLGELLCKHHQYKCNA
TPTYLDVSKDGLAFRIQVAYHREPQILRESLTPEGMLIYRDNAEAQALELETQHKPFLNS
TLHGLQQQHGCFGVVCRLAKRWLASQFLLEYIREEAADLLVASLFLHPAPFTLPSSPQVG
FLRFLHLISTFDWKNNPLIVNLNGKLTAADHTDIKNDFVASRESLPTMFIATPNDKKVSV
WTKKAPSVQMLQRAVMLAAESLRVLEMHLIDSSQKQDARVVFRPPLEAYDVLIHLVPQQV
PLLAKAVDPPAITYHRGTYSGNPLASGGALPVIDYDPVRLYLSELRDAFGDLALFFNDPF
GGTVIAVLWKPSAFEPQPFKTSLMNARRVEVNGDVATTVPNIEAILQDFRIIGKGLVKKL
ELRTEKWAV
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaagtggaaggaatcgtcattaactgaagaaaagatggaagaaccagataac
attcagaatgaagaaggaaaagagaaaaagagttcaaaacagtctgaggaccccaagcga
aaggcaaaggacacagtctcagatgctggggtcttacggccactcaagctgtccaaaaag
gagctgtacaaagcccccacagtggaagagctcaaccagctgaaagaagcagaaaatctc
ttccactgcagcatattgaaaatgcagatggaggaactgctgaaagaagtgtctcttagt
gagtacaggaagaagctggtggactcttttgtgaaggaggttacagatttcctgcagtct
gtgcctgaaactgaagttgtggagttggatgacctttcatggttgccaggtgttgaagtc
ccattcctccttgtcccgcctacagcaaaaggcaaatttcacatggagcctcctgcatcg
atcaacgtggtgggcagttatcccctggggacctgtatcaaacccagagtcattgtggac
ttggctgtcactattccagcttctattttgcacccaatggatgccattaaccagcggtac
ccacgaaagcgagcactgtatctggctggcctggcacagcaactctgcttctcagaggct
gtgggttcactgaactactcttgtctccatggcaaccgacttcgcccagtcctacttctc
aaacccccaggtaaagacagcagtaaggtcacattgcggattcatgccattcctcctccg
gacttcctcaaacctagccgctttcatcctcagaagaacaacatcaggactgagtggttt
acaggtgttgccaataagcagcaagagagcagtgagcctgctactcctcattataacagc
acagttcttggagatcatctcccactgtcacatcttcagttcctgtcggccatcagcgca
cagtgtcctgcttttggagagggtgtggccctcctcaaagtgtggctgagacagagagaa
ctggaccagggtgcaggttgtttttgcggcttccatgcatcaatgttaattgcttatctt
ctgtccacacacaaagtgggcaaaagcatgaatgcctaccagctgttcaggaatgcaatg
cacttctttgcttccacagatctgacagagaacggtatcaccttggctaaaaacccagac
tcaaaggcgccctcactgcaggagttccatgcagctttctctgtggtctttgtggaccca
tctgggcatctcaatctgcttgcagacatgacagcatttacctacaaacagatccagcat
gaggcatcactctcgctgaagttctgggatgatccgacaatagacggcttccatgctctg
ctcatgacgtccaaagccatgatcagaacatatgacaatgtctttcaactgagtgagctg
gtgaatttgcaagcctcttgtaaaaagctttcactcctgaatgagctcatggaccacagc
gggaactacgtccttagtgcacttcccttcattttgtccctcttgcagcgagggcttgga
gaaaggatctaccttctggcacactcactccctcaagaccctgagtggccggtggacagt
gcacctcctaaacataaggaccagccacctttgagcattggtttgatgctgaaccttgaa
cgtgctctctctgttcttgagagaggaccgccagcagataaccccaaggcagctgagttc
aggcagatgtggggctctcgctcagagttgcggcgcttccaagatggagccatcactgag
gcagtgctgtggtcagggaactccacctgtcagcggagactcattctactggagatcatc
acttacctactacagcttcatgccgatatccctgaatcatgtgtgagatttgttggtgga
catctggatgatatcatcaaagttaacaaagagatctgcactacaggagaggaggagagt
ctgaaggtggttcaggcttatgatgatctgagcaggaagctctggcagttggaggggctg
ccactgtctattacatcagtgcagggtgcccaccaggccttgagatatacacaggttttc
ccaccagttcctgtgaagctgaactatagtttttttgacaaaaagaagaaccgtctcggg
ttagtgccacaggaggacaaaccttgcccttattacatcacccctattaaagtcattgtt
catatggagggaagtggaaaatggcccagtgagcacctggcaatacgccacatcaaagca
gcctttcacatctgcttgggagaactgctttgcaaacaccaccaatacaaatgtaatgca
acacccacctacctggatgtgagcaaggatgggctagccttccgaatccaggtggcctat
cacagagaaccgcagatcctgagggaaagcctgacccctgagggaatgctgatatacagg
gacaacgctgaggcccaggcgctggagctggagacccagcacaaacctttcctaaacagc
accttgcatgggctccagcagcagcatgggtgttttggtgttgtgtgccgcctggctaag
cgttggctggcatctcagttccttttggaatatatccgagaggaagcagctgacctgttg
gtggcttcgcttttcctacatcctgcgcccttcactctaccaagttctcctcaggtgggg
ttccttcgcttccttcatttgatttccacatttgactggaaaaacaatcccctgatagtt
aacctaaatgggaaactcacagctgctgaccacacagatataaagaatgactttgtggcc
tctagagaatctcttcccaccatgttcattgccactcccaatgacaagaaagtctctgtg
tggactaaaaaggctccttctgtgcagatgctccagcgtgctgtcatgctggcggcagag
agtttgcgtgttttagagatgcatcttattgactccagtcaaaagcaggacgcccgggtg
gtatttcgacctcctctggaggcttatgacgttctgatccacctcgttccgcagcaggtt
cctctgttagctaaagctgtggatcctcctgccatcacctaccatcgaggcacctatagt
ggcaacccactcgcctcaggaggagctctgccagtcatagactatgatccggtccgactg
tatctctctgaactcagggatgcatttggagatctggctctgtttttcaatgacccattt
ggtggaaccgtgatcgcagtgctgtggaagccatctgcctttgagccacaacccttcaag
acatctctaatgaatgcccgccgtgtggaggtgaacggagatgtggcaaccacagtgcca
aacatagaggccatcctgcaggatttccgcatcatcgggaagggtctcgtcaaaaaattg
gaactaaggacagaaaaatgggctgtctag
DBGET
integrated database retrieval system