Ctenopharyngodon idella (grass carp): 127512309
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Entry
127512309 CDS
T08802
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1 isoform X1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
127512309
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cide04040
]
127512309
Ion channels [BR:
cide04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
127512309
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
Ank_3
Ank_4
Phage_tudor
Motif
Other DBs
NCBI-GeneID:
127512309
NCBI-ProteinID:
XP_051749051
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Position
5:complement(19753759..19762374)
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AA seq
463 aa
AA seq
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MSKSKDSSTSSFTLETDDQTEEERSKAKQMKKGAAKDKRPMDSNYLDDTEEPTCKIKFNL
HFDRGIRNVKEEPAQHDNERFTIKKLFEAVSSGEVSKLQGLHQYLHKNMKRLTDSQFKSD
GKTALLKALLNLRQGENDTIEHLLDIADKLGDLKSLINAAYTDSNYKGQTALHVAIERRS
AKFVQMLVKKGADVHAKACGKFFQPNQEMCFYFGELPLSLAACTNQPDIVDFLMDNPYQA
VDVRERDSHGNTVLHALVSIADNSPENTEFVNAIYDHILIKADQLLPKIKLEEIENNEGL
TPIQLAAKTGKLGLFKHIVQREFKGCRHLSRKITEWAYGPVCSSLYDLASLDTYEKNSAV
EIVVYGSEIPNRLEMLQIEPVNRLIEEKWERFAKRMFMFNFIVYIIYLFIFTAVAYNREE
GKEKNNSDNQSLKPPFHYKNNREGYLLQTGQVITLIGAAVLLY
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaatcaaaagacagcagcacctcatctttcactcttgagacggatgaccagaca
gaggaggaaaggtcaaaggccaaacaaatgaagaaaggagccgcaaaagacaagaggccc
atggattctaactacctggatgacacagaggaacctacatgcaaaattaaatttaaccta
cactttgacagggggatcagaaatgtaaaagaggaaccagctcagcatgacaatgagagg
tttaccatcaagaagctgtttgaggccgtgtccagtggcgaggtgtcaaaactgcagggt
ttacatcagtacctgcacaaaaacatgaaacgcctcaccgactctcaatttaagtccgat
ggaaagacagccctgctgaaagcgcttttaaatttgcggcaaggcgagaatgacactatt
gaacatctgctggacattgcagacaaactgggagatttaaaaagtctcatcaacgctgct
tacacagacagtaactacaaaggtcagacagcactccatgttgcaattgaaaggaggagt
gcaaaatttgtacagatgctggttaagaaaggggccgatgtccatgctaaggcctgtggg
aaattctttcaacccaatcaagaaatgtgcttctatttcggtgagttgcccttgtcgctg
gccgcttgcactaatcagccagacattgtggacttccttatggacaacccctaccaggcg
gtggatgtcagggagagggactctcatggaaatacggtgcttcacgcactagtatccata
gctgataatagtcctgaaaacacagagtttgtcaatgccatatatgaccacatcttaatc
aaagctgaccaacttctccccaagatcaaactggaggaaatcgaaaataacgagggactc
acaccaatccaactagccgccaaaacaggaaaattagggctgtttaagcacatcgtgcag
cgggagtttaaggggtgcaggcatctgtcacggaagatcacggagtgggcctacggacca
gtgtgctcgtctctgtatgacctcgcttccctcgacacctacgagaagaactccgcagtg
gagatagtcgtttatggcagtgagattcccaatcgcctcgagatgctccaaattgagcct
gttaacagactaattgaagagaagtgggaaagatttgcaaaacggatgttcatgttcaac
tttatcgtttacattatctaccttttcatcttcactgctgtagcttataaccgcgaagaa
gggaaggagaagaacaacagtgacaaccaatcattaaagcctccatttcattataaaaac
aatagagaaggctacctgcttcagacaggacaagtcataactctcattggagcggctgta
cttctttattag
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