Ctenopharyngodon idella (grass carp): 127512346
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Entry
127512346 CDS
T08802
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein L isoform X1
KO
K13159
heterogeneous nuclear ribonucleoprotein L
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cide03041
]
127512346
Spliceosome [BR:
cide03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
127512346
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Gene cluster
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_10
RRM_occluded
RRM_3
DUF4523
RRM_Nup35
Motif
Other DBs
NCBI-GeneID:
127512346
NCBI-ProteinID:
XP_051749116
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All DBs
Position
5:22960945..22971894
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AA seq
540 aa
AA seq
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MAAAAGHYYGDGGRATKRQKTDSDGMATEGYNDPHKTLPSLVVHVRGLIDGITEADLVEA
LQEFGTISYVVLMPKKRQALVEFEDMSGSCNAVTYANNNQIYIAGRPSYINYSTSQKISR
PSDSDDTRSVNNVLLLTIMNPIYPITTDVLYTICNNCGPVQRIVIFRKNGVQAMVEFDSV
QSAQRAKASLNGADIYSGCCTLKIEYAKPTRLNVFKNDQDTWDYTNPNLSGQDTDADGNW
NNSQDPNANPNKRQRQPALLGDHPPEYAGPQSGYGHYDDTYGPPPPPAHYEGRRMGPPMG
RGRGGPRYGGAQYGHGPPPPDYSAHADSPVVMVYGLEPTKINADRVFNIFCLYGNVERVK
FMKSKPGAAMVEMGDCYAVDRAISHLNNNMLFGQKLNVCVSKQQAIMPGQSYQLEDGSCS
FKDFHGNRNNRFTTAEQAAKNRIQQPSNVLHFFNSQPDSTVEVFSQICDELGIKSPASVK
LFTGKSGTAGERSSSGLLEWESVNDAMEALAMMNHYQMKNPSGPYPYTLKLCFSTAQHAN
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgcggcaggccattattacggcgacggaggcagagcaacaaaaagacagaaa
acagacagcgacggaatggccacggagggttacaatgacccgcacaagaccttgccctcg
cttgtggtgcatgtaagggggcttattgacggcattaccgaggctgacctggtggaggcg
ctacaggagtttggcactataagttatgttgtgttgatgccaaagaagcgtcaggcactg
gtggagtttgaggacatgagcggctcctgtaatgcagtaacatatgctaacaataatcaa
atctacatcgctggccggccgtcttacatcaattactctaccagtcagaaaatctctcgg
cccagtgactctgatgatacacggagcgtcaacaatgtactgcttctcaccatcatgaac
cccatctaccccattaccacggatgttctgtacaccatttgtaataactgcggacccgtg
caaaggattgtgatcttcaggaaaaatggagttcaagccatggtcgaatttgactcagtc
cagagtgcgcagagagccaaagcctctctcaatggagctgacatctactcgggctgctgc
acccttaaaattgagtatgccaagccaacccgtctcaacgtcttcaaaaacgatcaggat
acatgggactacaccaaccccaatctgagtggccaagataccgatgcagacggcaattgg
aacaattcacaagaccccaatgctaacccgaacaagcggcagaggcagccagcattgcta
ggggatcatccacctgaatatgctggtcctcagagtggctacggtcactatgatgacacc
tatggaccacctcctccaccagctcactacgagggcaggcgcatggggcccccaatgggg
cgtggccgtggcggaccccggtatggtggggcacagtacggacatggacctcctccacca
gactacagcgctcatgctgactctcctgtggtcatggtgtacggtcttgagcccaccaag
atcaatgcggacagagtgttcaacatattctgtctctacggcaatgtggaaagggtgaag
tttatgaagagtaaaccaggtgctgcgatggtggagatgggagactgttatgctgtggat
agagccatttcgcaccttaacaacaacatgctgtttggacaaaaactcaatgtctgtgta
tccaaacaacaggccataatgccgggtcagtcataccagctggaagatggcagttgtagt
tttaaggattttcatggcaacagaaacaaccgtttcaccactgctgagcaggcagccaag
aaccgcatccagcagcccagcaatgtactgcacttcttcaacagtcaaccagacagcact
gttgaagttttcagtcagatttgtgatgagttgggaataaagagcccagccagcgtcaag
ctgttcactggcaagagtggaactgcaggtgagagaagttcatctggtctgttggagtgg
gagtcagtaaatgatgctatggaagctcttgccatgatgaaccactaccagatgaagaac
cctagtgggccttacccatacactctcaaactgtgtttttcaactgcacagcacgccaac
tga
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