Ctenopharyngodon idella (grass carp): 127512374
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Entry
127512374 CDS
T08802
Name
(RefSeq) probable E3 ubiquitin-protein ligase DTX2 isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
127512374
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127512374
Enzymes [BR:
cide01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127512374
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127512374
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-UDP
zf-rbx1
zf-RING_11
zf_RING_Vps8
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
127512374
NCBI-ProteinID:
XP_051749175
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All DBs
Position
5:complement(7245612..7274826)
Genome browser
AA seq
613 aa
AA seq
DB search
MATGSSFHSGGSGSRNGPSFASPSSSSGVPGQAQPMAVVWEWQDDLGYWRPYTGQVSSYI
EQCLQHQRGAATASNSSICLAQADPSLSAYIIDIPNLKQFRQDTGKMRAVRRSLFPQSSA
LGSGVLWEWANDEGGWTAYEIRTSILLEHSYQAGQATADLSPQGYNYIVDLTALEQVNKT
SSYRRRVRRQGSMPYPLTSGSVIHSGPACTCHQCVSNSSTAGPMLSRSRHSFSAGQANRP
SLQTQHGRLPGASSSSAYSPYPRRPLSMGSLLWNNPWSTPTSVAHSTGPPQAFGHHANGL
SIPTIPLHMNGSSSVNSALAGMASILMSAAGLGVRFMTAPFSQRGSSRPTKGQPSSVKRA
KRQSRTAPAQKSEEVIKKYMEEVPVVPDEDCIICMERLACPSGYEVPAECSQSLQPNTVG
KFTKCGHTFHMLCMLAMYNNGTKDGSLQCPSCKTIYGEKTGTQPKGNMDIYSIPQSLPGH
PDCGTIQIIYNIPPGIQGPEHPNPGQPYTCRGFPRFCFLPDNDKGRKVLELLKVAWTRRL
IFTVGTSSTTGEPDTVIWNEIHHKTEMMSNVSGHGYPDPNYLDNVLSELASQGVTEDCLK
RDAQSQGAQGSGM
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaggctccagttttcattccggaggaagtgggtctagaaacggaccatctttc
gcatcaccatcttcctcctctggagtgccaggacaggctcagccgatggcggtggtttgg
gaatggcaggatgatctgggctactggaggccctatactggacaggtgagcagctacatc
gagcagtgtctccagcatcagagaggagcagcgaccgccagcaacagcagcatctgtctg
gcacaggcagaccccagcctgtctgcgtacatcatcgacatccccaacctcaaacagttc
agacaagacaccggaaagatgcgtgctgtgcggcgatccctgttcccgcagtcttctgcc
ctaggcagtggtgttctttgggagtgggccaatgatgaaggagggtggacggcgtacgaa
atccgaacctccattttgctggagcacagctaccaggcagggcaggccacagctgacctg
agcccacagggctacaactacattgtggacctcaccgctttggaacaagtcaacaagacc
tctagctacagacggcgcgtcaggcggcaaggcagcatgccgtatcctctcacctctggg
tcggttattcactcgggcccagcctgtacctgtcaccagtgcgtgagcaatagcagcacc
gctggaccaatgctgagccggtcacggcattcattctccgcggggcaggccaacaggccc
agtctccagacgcagcatggaagacttcctggagccagctcctcttcagcctactcgccc
taccccagaagacctctgtcgatgggatccctgttatggaacaacccatggagcacccct
acttcggtggctcattctacaggaccgccacaggcttttggtcaccatgcaaatggctta
agcatcccaaccatccctctacacatgaacggatccagtagtgtgaactcggcgctggca
ggcatggcttccattttgatgtcagctgcaggactgggagttcgcttcatgaccgccccc
ttctcccagcgtggctccagcaggcccaccaaaggccagcccagctccgttaagagggca
aagagacagtccaggacagctcctgctcagaaatcagaggaagtcattaagaagtacatg
gaggaagtgcctgtggttccagatgaggactgtattatctgtatggagcgcctggcctgc
ccgtctggttatgaggtcccagctgagtgctctcagtctcttcagcccaacactgtgggc
aaattcacaaaatgtggtcacaccttccacatgctctgcatgctggccatgtacaacaat
ggaacaaaggacgggagcctgcagtgcccctcatgtaagacaatctacggagagaagacc
ggcacccaaccaaagggtaacatggatatctacagtattcctcagtctttgcctggacac
ccagactgcggcactatacaaatcatttacaacatcccgcccggaatacagggtcctgag
cacccaaacccaggccagccgtatacgtgcagaggattccctcgcttctgtttccttcct
gacaatgacaaaggcagaaaggtgctggagctgttgaaggtggcgtggacacggcgcctc
atcttcaccgtgggcacttccagcaccacaggggagcctgacaccgtcatttggaacgag
atccaccacaagacggagatgatgtccaatgtctccggccatggctaccctgaccctaac
tacctggacaatgtactttcagaactggcgtcacagggtgtgacggaggactgcctgaaa
cgagacgctcagagccaaggggctcaaggttcaggcatgtga
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