Entry |
|
Name |
(RefSeq) uracil-DNA glycosylase
|
KO |
|
Organism |
cide Ctenopharyngodon idella (grass carp)
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:cide00001]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
127512424
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:cide03400]
127512424
Enzymes [BR:cide01000]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
127512424
DNA repair and recombination proteins [BR:cide03400]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
127512424
Prokaryotic type
127512424
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
5:30795895..30802077
|
AA seq |
298 aa
MTWQHHSDAAVFVKGSLRNANECIHSAYTYLTLDMSKESCKEQVSSERMQLSEEQLHQIE
QNRRAALERLASRNVPVPVGESWRRQIGTEFTKPYFTKLMSFVTMERKCFTVYPSPEQVF
YCTTLCAIEDVKVVILGQDPYHHPGQAHGLAFSVLRPKPPPPSLENIFMELKEDIVGFQH
PGHGDLTEWAKQGVLLLNSVLTVRAHQPTSHEGQGWELFTDAVVLWLSRNLNGLVFLLWG
LYAQRKGRVIDRKRHHVLETSHPSPYSAHLGFFGCRHFSKTNMLLKASGKNPIDWTAL |
NT seq |
897 nt +upstreamnt +downstreamnt
atgacatggcagcatcacagtgatgcagcagtatttgtgaaggggtctctgagaaacgcc
aacgagtgcatacacagtgcatacacttatcttactttggacatgtcaaaagaatcctgc
aaagagcaagtaagtagtgagcgcatgcagctcagtgaggagcagctgcatcagatagag
cagaacagacgtgctgcacttgaacgactggccagccgaaacgtacctgtacctgttggt
gaaagctggcgaagacaaattgggactgaatttacaaaaccttattttacaaaactaatg
tcttttgttacaatggagaggaaatgctttactgtctatcccagccctgagcaagtgttt
tattgcacaactttgtgtgcaattgaagatgtaaaagtggtcattcttgggcaagacccc
tatcaccatccaggtcaagcccatggtttggccttcagtgtgctgaggcctaaacctcct
cctcctagtttggaaaacatatttatggagttgaaagaagatattgttggcttccagcat
ccaggtcatggagaccttacagaatgggctaaacagggtgttctgctgctgaattctgtg
ttgacagtgagggctcatcaacccacctctcatgagggtcaaggctgggagctcttcaca
gatgctgtggtcctgtggctcagcaggaacctcaatggcctggtctttctgctttggggc
ttgtatgctcagaggaaaggcagagtgattgacagaaaacgtcatcatgtccttgagact
tcacatccatcaccatactcggcacatttaggcttctttggatgtaggcacttctctaaa
actaacatgctacttaaagcatcaggaaaaaatccgattgattggacagctctctga |