Ctenopharyngodon idella (grass carp): 127512456
Help
Entry
127512456 CDS
T08802
Name
(RefSeq) transcription factor Sox-19a
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cide03000
]
127512456
Transcription factors [BR:
cide03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
127512456
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
127512456
NCBI-ProteinID:
XP_051749325
LinkDB
All DBs
Position
5:complement(26273918..26276298)
Genome browser
AA seq
296 aa
AA seq
DB search
MYSMLEHDMKSAVPPTHQSAQGMTQLNGGVTHGTAKPAVNNQQQSSDPMDKVKRPMNAFM
VWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRALHMKEYPDYK
YKPRRKTKPVLKKDNPAAKYPLSAGNLLAAAAAQGSGGSPRMDSYGWGHTGGYAGMQTDA
LGYSQQLHRYDLSALQYPSAMATAQTYMNGANSYTPMSYSSTPQQPSPVMSMVKPDQVSH
SPTGAHSHQRGPLQGDLRDMISMYIPGGDTTDSGAQRGYSNIQQHYLTGTAPLTHI
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgctggaacacgacatgaagtccgccgtgccaccgacgcaccagagcgcg
cagggaatgacccagctgaacggtggagtgactcacggaaccgccaaaccggctgtcaac
aaccaacaacagagtagcgatcctatggacaaagttaagaggcccatgaacgcttttatg
gtctggtctcggggtcagaggcgcaaaatggcacaggagaacccgaaaatgcacaactct
gagatcagcaagcgcttgggtgccgagtggaagctgctgacggacgcggagaaacggccg
tttatcgacgaggccaagcggcttcgcgcactgcacatgaaggaatacccagattataaa
tacaaaccccgtcgtaagacaaaacccgtgctgaagaaggacaacccggctgctaagtat
cccctatcagccggcaacttactggcggcagccgcggctcaagggtcaggtggaagcccg
cggatggacagctacggctggggtcacacaggtggctatgctggcatgcagacggatgct
ctgggttacagtcagcagctgcaccgctatgatctgtccgccctgcagtatccatccgcc
atggccaccgcacagacttacatgaatggtgccaactcctacacccccatgtcctacagc
agcactccacagcagcccagcccggtcatgtccatggtgaaaccagaccaggtgtctcac
tctcccaccggagcccacagccatcagcggggtcctttacaaggagacctgagggacatg
attagcatgtatatccctggcggagacaccacagacagtggagcacagagaggatattcc
aatatccaacagcattacctcaccggtacagcacctctcactcacatctga
DBGET
integrated database retrieval system
