Ctenopharyngodon idella (grass carp): 127512480
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Entry
127512480 CDS
T08802
Symbol
zgc:65851
Name
(RefSeq) low molecular weight neuronal intermediate filament
KO
K04572
neurofilament light polypeptide
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
cide01009
]
127512480 (zgc:65851)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cide04812
]
127512480 (zgc:65851)
Protein phosphatases and associated proteins [BR:
cide01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
127512480 (zgc:65851)
Cytoskeleton proteins [BR:
cide04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
127512480 (zgc:65851)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
127512480
NCBI-ProteinID:
XP_051749384
LinkDB
All DBs
Position
5:36846801..36857992
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AA seq
568 aa
AA seq
DB search
MSYSGDMYSSSSYRKIFGDAPRRVPVGSSPSRVTVSYRSVPQQQHHRTYGSPSPMITSSS
YRTKLGSSRGFQPDTVDLTQTTAITNELKIIRTNEKEQLQGLNDRFVTFIEKVHNLEQHN
KVLEAEVALLRQRHNEPSRLHDLYEQEVRELRARVEELTHEKSQMHLDCVQMNDALERVK
EKLDEETRQREEAENSLKGYRKDVDDATLSRLELEKKVESLLDEIAFLRKVHEEELQELQ
ASLQATQVSVEMDVSKPDLAVALKDIRAQYESLSSRNQQQAEEWYRSKFVSVTEAAARNN
DALKQTKDELSEYRRQLQARTLEIESLKAHNESLERQLAEMEDRNNNEIGELQDTIQQLE
SALRSTKGEMSRHLREYQDLLNVKMALDIEIAAYRKLLEGEECRLSSVSGAMMQSAYSYP
SSRTYALSSYRRSVAKPETEEEEEQEEEVEEEEKEEEKEEVEEEEGGEEGEEAEEGEEQE
EGGDEQEEEEEEVEQEDKKEKEKEDEKKEKEEKKSPKELKESEKEKEKEKEKEKEKKSDS
KADSNKADSKSEKGDNNKDEKAAEVKGK
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgagttattccggcgacatgtactcgagcagctcatacaggaagatttttggtgatgcg
ccacggcgcgtccccgtgggcagcagcccgtcccgggtgacggtgagctaccgctccgta
ccccagcagcagcaccaccgcacctacggctctccatcccccatgatcacatcctcaagt
taccggaccaaactcggatccagccgcggcttccagccggacaccgtggatctgacgcag
accaccgccatcaccaacgagctgaagatcatccgcaccaacgagaaggagcagctgcag
ggcctgaacgaccgcttcgtgacgttcatcgagaaggtgcacaacctcgagcagcacaac
aaagttctggaagcggaggtcgcgctgctgcgccagcgccacaacgagccgtcgcgcctg
cacgacctctacgagcaggaggtccgcgagctgcgcgctcgcgtcgaggagctgacgcac
gagaagagccagatgcacctggactgcgtgcagatgaacgatgcgctggagcgcgtcaag
gagaagctggatgaggagacccggcagcgggaggaggccgagaacagcctgaagggatac
cgcaaggacgtggatgacgccaccctgtcccgcctggagctggagaagaaagtcgagtcc
ctgctggatgagatcgcgttcctcaggaaagtgcacgaggaggaactgcaggagttacag
gcgtcacttcaggccacccaggtgtctgttgagatggacgtcagtaagcctgaccttgct
gtggccctgaaggacattcgtgcccagtacgagtctctctcttcccgcaaccagcagcag
gcagaggaatggtaccgctccaagttcgtctccgtgacggaggcggcggcgcgtaacaac
gatgctctgaagcagaccaaggatgagctgtccgagtaccgccgacagctgcaggcccgc
accctggagatcgagtccctgaaagcccataacgagtctttggagagacagctggctgag
atggaggaccgcaacaacaatgagatcggcgagctgcaggacacgattcagcaactggaa
tctgctcttcggagcacaaaaggtgagatgtcccgccacctgcgcgaataccaggacctg
ctgaatgtcaagatggcactggacattgagatcgcagcctacaggaagctgctggaaggt
gaggaatgccgtctgagctctgtgagcggagccatgatgcagtccgcctactcttatcca
tcaagccgcacttatgccctaagctcctacaggaggagtgtagccaaacctgagacagag
gaagaggaagagcaagaagaggaggtggaggaggaagagaaagaggaggagaaggaagaa
gtagaagaggaggagggaggagaggaaggagaggaggccgaggaaggagaagaacaggaa
gaaggaggcgatgagcaggaggaggaagaggaggaggtagaacaagaggataagaaggaa
aaggaaaaggaggatgagaagaaagaaaaggaagaaaagaagagtccaaaggagctgaag
gagagcgagaaggagaaagagaaagaaaaggagaaagagaaggagaagaagagcgatagc
aaggcagatagcaataaggcagatagcaagagtgaaaagggggacaataacaaagacgaa
aaggccgctgaggtcaagggcaagtaa
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