Ctenopharyngodon idella (grass carp): 127512523
Help
Entry
127512523 CDS
T08802
Name
(RefSeq) nipped-B-like protein A
KO
K06672
cohesin loading factor subunit SCC2
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
127512523
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cide03036
]
127512523
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
127512523
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT_EZ
HEAT
Cnd1
Cnd3
ARM_ECM29
Motif
Other DBs
NCBI-GeneID:
127512523
NCBI-ProteinID:
XP_051749459
LinkDB
All DBs
Position
5:39583022..39626390
Genome browser
AA seq
2375 aa
AA seq
DB search
MNGDMPHVPITTLAGIAGLTDLLNQLPLPSPLPGTTTKSLLYSGRVAEEVGRLMGCRDET
LVSQLASSLSQVSTEHIELKDSLGSDDLEGDVPVLLQLLLSRNPNIFRNKTAPSTPQYPA
QAGISQQSMAPPYKITHGSMQGSPASANYQQASMSHSPSGRFVAGQPGSGGRFLPQQSSP
VPSPYAPQSPATGYRQYPHPPAYSQHQHLQQGSVASPMIPGGMRNVHENKDQMRTGFTSH
ILQSSPPYTPPCDGAQELHLGSPEKMRGLKPNEGERDTADKAAVYDMVGSPSKDTLTHTK
LILRQSRTRPAEVELGGMYPGSDPEGELVEALAAIERMESEAAMETDRGAKEVQDKDKPL
KKRKQDSHPQEPGAAGTAGSGSGAPGGGGGANAGHRLAPQEASAAGTSASRPGLQVSLEQ
AGRVEDACMGMPIPASEAQRWPQEPQEGVTPKPVKHKHDHAPEHRHRHDDKQPDTPRQKH
RPEGRHADVSTQRAAQSGSKPVELPPYMLGENTSSGVLKNFTIPKIRKGGDHGGGDLPEG
WKQPCVRLERLEPEMDMKKSVKPVVVLQKLSIDEVQRLMRERDSRGSKSGKNRLSSGRSG
KGGIDPSVLKDLPPELLAEIESTMPLCERVKMNKRKRSTVNERPKYAEDSSEDEDFSSRK
RQKKDRDRTWEFEDRDRRSSGEHRRGNFDTRRGSGSRYDDSDQDSPPPSLSDVARRLKTK
EKQKKRKAYEPKLTPEEMMDSSTFKRFSLSIDNIFENLEDVDFTAQDDDEIPQELLLGKQ
QLNELGSESAKIKAMGITCRIPSDKLVKLLNILEKNILDGASLSTLMNLDNEGEDEERLW
RDLIMERVTKSADACLTALNIMTSSHMPKAVYIEDVIERVLQYTKFHLQNTLYPQYDPVY
RVNPKGGSLLSSKAKRAKCSTAKQRVIVMLYNKVCDVVSNISELLEIQLMTDTTILQVSS
MGITPFFVENVSELQLCAIKLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLN
SSDAEGEPIYIQMVSALVLQLIQCVVHLPSDKDSEDDHRKVDDDVFITNSYETARRTAQN
FLTVFLKKCGSKQGEEDYRPLFENFVQDLLSTVNKPEWPASELLLSLLGRLLVHQFSNKQ
TEMALRVASLDYLGTVAARLRKDSVTSRMDQKAIDCIVREGSEGDETQRLQKALLDYMNE
NTETDPALTFARKFYIAQWFRDCTTEAEKAMRTQKEDDSEGTQHAKELQATGDIMQRAET
RKKFLHSVVKSTPNQFTTLRMNSDTVDYEDACLIVRYLASTRPFSQSFDIYLTQILRVLG
ESAIAVRTKAMKCLSEVVAVDPSILARSDMQRGVHGRLMDNSTSVREAAVELLGRFVLSR
PQLTEQYYDMLIERILDTGISVRKRVIKILRDICLEQPNFSKITEMCVKMIRRVNDEEGI
KKLVNETFQKLWFTPTASHDKETMNRKILNITDVVAACKDTGYDWFEQLLQNLLKSEEDS
SYKPARKACVQLVDNLVEYILKYEEALAEHKSVNSTRLVACITTLYLFSKIRAQLMVKHA
MTMQPYLTTKCSSQSDFMVICNVAKILELVVPLMDHPSESFLTTIEEDLMKLILKYGMTV
VQYCVSCLGAIVNKVTHNYKFVWACFNRYYGALTKLKLQHQEGTNNMALAATKAALLRSL
FTVGALCRHFDFDLEQFKGTTKVVIKEKVLESLLYFTKHEDEEVRCKAIIGLGFLFIMHP
SQMFVPEVKSLYNGLLSDKRSSITLKIQVLKNLQMYLQEEDSRMQEADREWQKMSKQEDL
KEMGDISSGMSSSIMQLYLKQVLESFFHTQSSVRHFALNVIALTLSQGLIHPVQCVPYLI
AMGTDPEPTMRNKADQQLVEIDKKYTGFIHMKAVAGMKMSYQVQQAILGSTRSVIRGFRQ
DESNSAQCSHLYSMVRANRQHRRAFLISLLNLFDDSSKMEVSMLLFMADNLAYFPYQTQE
EPLFIMHHIDITLSVSGSNLLQTFKESLVKVPGRKSRKRRRRRRRPQQQQQQNGAEEERG
EQDEEKERNSGDEEYDGDDYEEDEEGQRVRKPKPMEVTRQSESDSESDLEDADAVMERLP
DDAAPLLDFARASQGILLLLVLKQHLKNLYGFSDSKIQKYSPTESAKVYDKAVNRKSSVI
FSPRQTIDFLHNDEVHDELTYELKRKIVKQYLDFKLLMEHLDPDEEDEEGETSANVRNKA
ITALLGGAATSPRNHHTLDSEDEESDGEERTPGASRRGRRTGDSADVLLANMNESVSALD
IIAIHCPKYRDRPQIARVIQRNSDGYNIHWMAGSYSSSWTEAKRRDGRKLVPWVDTIRET
DIIYKKITLTSGNKLNHKVAQTLRSLYAAKDRNSS
NT seq
7128 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggacatgccacatgtgcccatcacaacccttgctgggatcgctggtctcact
gacttgttgaaccagctgcccctgccctcccctttaccgggcaccaccactaagagcctg
ctgtacagcggccgtgtagctgaggaagtggggcgtctgatgggctgcagggatgaaact
ctggtctctcagcttgccagcagcctcagccaggtctccacggagcacatagagctgaag
gacagccttggcagtgatgatttggagggagatgttccagttctgctgcagcttttgctg
tccaggaaccccaacattttcaggaataagactgcacccagcactccccagtatccggcc
caagcaggtataagtcagcagtcaatggcaccgccgtataaaatcacgcatggctccatg
cagggaagcccagcctctgccaattaccagcaggcctctatgtcccacagcccctctggg
cgttttgtggcggggcagcctggttctggtggacggtttctgcctcagcagagcagccca
gtgcccagcccatatgccccccagagccctgctaccggctacagacagtacccacaccct
ccagcctacagtcaacaccagcacctacagcaaggttcagtagcaagtccgatgattcca
ggaggcatgagaaatgttcatgagaataaggatcagatgaggacgggtttcacgtctcac
atactgcagtcatctccaccttacacccctccttgtgatggagctcaagaattgcatctg
ggctccccggaaaagatgcgcggtctaaagcctaatgagggagagcgggacaccgctgat
aaggctgcagtgtatgatatggtgggctcgccgtcaaaagacacactaactcacactaag
ctgatcctgaggcagtcacggacgaggccagcggaggtggagcttgggggaatgtaccca
ggctcagacccagaaggagaacttgtggaggctcttgccgcaatagaaaggatggaaagt
gaagcggccatggaaacggaccgtggcgctaaagaggtgcaggacaaagataagcctttg
aagaagcgtaaacaggactcccacccgcaggaacctggtgcagctggcacagctggttca
ggctctggggctccaggtgggggaggaggggctaacgctgggcacaggctggcccctcaa
gaggccagtgctgcgggcaccagtgccagtcgcccgggcctgcaagtgagtttggagcaa
gcgggaagagtggaggacgcatgcatgggcatgcctatccctgccagcgaggctcagcgc
tggcctcaggagccgcaggagggcgtcaccccgaagcccgtcaaacacaagcatgaccat
gctccagaacaccgtcatcggcatgatgacaagcagcccgatacaccgcggcagaaacac
agacctgaaggtcggcacgccgacgtcagcacgcagcgtgcagctcagtcggggagtaaa
ccggtcgaacttcctccatacatgctgggtgaaaacaccagttcgggagtgcttaagaac
ttcaccattcccaaaatcagaaaagggggagatcacggaggcggagatcttccagaaggc
tggaagcaaccgtgtgtgcggctggagagactagaacctgagatggacatgaagaagagc
gtcaagcctgtggttgttctgcagaaactctccatagatgaagtgcagaggctcatgaga
gagagagactcgcgtggctccaagtccggcaagaacagactctcctctgggagatctggg
aaaggtggaatagacccatctgtgctgaaggatcttcctcctgagctgctggcggagatt
gagtccaccatgcccctgtgtgagcgggtgaagatgaacaagcgcaaacgcagcactgtt
aacgaaaggcctaaatatgcagaggacagctcagaggacgaggatttctcatctcgtaaa
cgtcagaagaaggatcgcgatagaacatgggagtttgaggatcgagatcggaggagttcg
ggagaacatcgaagaggaaattttgatacgcgcagaggctcaggcagccgatacgacgac
tctgatcaagattctcctcctcccagccttagcgatgttgcaagacgtttaaagacgaaa
gagaagcagaagaagaggaaagcatatgagcctaagctaacacctgaagaaatgatggac
tcgtccacttttaagaggttctcgttgagtattgacaacatctttgagaatcttgaggat
gtggactttactgctcaggatgacgatgagatccctcaggagctgttgttggggaaacag
cagctaaatgaattgggcagtgaatctgctaagataaaagccatgggcatcacttgcagg
attccttctgataaactggtgaaactgttgaacatcctggagaagaacattctggatgga
gccagtctttctacactcatgaaccttgataatgagggagaggacgaggagcgtctctgg
cgggatctcattatggagcgtgtgaccaaatcagctgatgcgtgtctgacagcactgaac
atcatgacatcatcacacatgcctaaagccgtgtacattgaggatgtgatagagagagtt
ctgcagtacactaagttccacctgcagaacactctttacccacagtatgatccggtctac
agggtcaaccctaaaggaggttccttgcttagctccaaagcaaagcgagccaagtgctcc
accgccaagcagagagttatcgtcatgctctataacaaagtgtgtgacgtggtcagcaac
atctcagagctgctggaaattcagctaatgactgatacaacaatattgcaggtctcttca
atgggcatcactccgttctttgtggagaatgtcagtgagctgcagctctgtgccataaag
ctggtgacggcggtcttctctcgttatgagaagcacagacagttaattttagaggagatc
tttacctctttggccagactgcccaccagcaaacgcagtctcaggaacttcaggttgaac
agtagtgatgcagagggtgagcccatatacattcagatggttagtgctctggtgctgcaa
ctaattcagtgcgtggtccatctgccctctgacaaagactctgaagatgatcacaggaag
gttgacgacgatgtgtttatcaccaactcgtatgaaactgccagacggacggctcagaac
ttcctcactgtattcctcaagaagtgtggcagtaaacagggtgaggaagactacaggccg
ctgtttgagaactttgtgcaggacctgctgtctacggtcaacaaacccgagtggcccgcc
tctgaattactgctgagccttctgggtagattactggtgcaccaattcagtaacaagcag
acagagatggctctgcgggtggcatcactggattatctgggtactgtagcagccagattg
agaaaagattcagtcaccagcaggatggaccagaaagccattgactgcatcgtcagagag
ggctcagaaggagacgagactcagcggctgcagaaagctctgctggattatatgaatgag
aatacagaaacagaccctgccctcacttttgcacgcaaattttacatcgctcagtggttc
agagactgcactacagaagctgagaaggccatgaggactcaaaaggaggacgactcggag
gggacgcagcacgccaaagagctccaggctaccggagacatcatgcagcgtgccgaaact
cgcaagaaattccttcactctgtcgtcaaatcaactcccaatcaatttactactctcagg
atgaattcagacactgtggactacgaagatgcctgccttatcgtacgctacctggcctcc
accagacccttctctcagagctttgacatctacctgacacagattctgagagttttaggg
gagagtgccatagctgtcaggaccaaagccatgaagtgtctgtctgaggtggtggctgtt
gaccccagtatactggccaggtctgatatgcagcgtggcgttcatgggcggttgatggat
aactccaccagcgtgagggaagcagcggttgagctactcggacggtttgtgttgagtcga
cctcagctgacggagcagtactacgacatgctcatcgagaggatattggacactggtatc
agcgtgaggaagagggtgatcaagattctgagagacatctgtttagagcagcccaacttc
agtaagatcaccgagatgtgcgtgaagatgatccgcagggtcaatgacgaggagggcatc
aagaaactggtgaatgaaacattccagaagctgtggtttacacccacagccagccatgac
aaagagacaatgaataggaagattctcaacatcactgatgtggtcgctgcctgtaaggac
actggctatgactggtttgagcagctcctgcagaaccttttaaagtcagaggaggattcg
tcctataagccagccaggaaggcctgtgtgcagttggtggacaatcttgtggagtacatc
ctcaaatatgaagaggcacttgcagagcataagagtgtgaactcgacgcggttggtcgca
tgcatcaccactctgtatctgttcagtaagatcagagcacagctgatggtcaagcacgcc
atgactatgcagccctacctcaccaccaagtgcagttctcagagtgacttcatggtgatt
tgtaatgttgcgaagatcctggagctggtagttcctctgatggatcaccccagtgagagc
ttcctcaccaccattgaagaagacctgatgaagctcatcttaaaatatggcatgacggtt
gtccagtactgtgtgagctgtttgggtgcaatagtgaataaagtgactcataattataag
tttgtatgggcctgttttaaccgttattatggggcactaactaagctaaagttacagcat
caggagggtacgaacaacatggcactagctgccaccaaagcagccctgctcagatctctc
ttcactgtgggagctctctgcagacactttgacttcgacctcgagcagttcaagggcacc
actaaggttgtgataaaggagaaggttttggaatcattactgtacttcactaaacatgag
gatgaggaagtccgatgcaaagccatcattgggttggggttccttttcatcatgcacccg
agtcagatgttcgttccagaggtgaagtctctgtataacgggctcctatctgataaacgt
tcctctatcacactcaagatccaggtgttaaagaacctccagatgtatctccaagaggag
gactctcgcatgcaagaggccgacagagagtggcagaaaatgtcaaagcaggaggatctg
aaagagatgggtgacatctcctctggtatgagcagttccatcatgcagctttatttgaaa
caggtgctggagtctttcttccacacgcagtccagcgtacgacacttcgccctcaatgtc
attgctctgaccctcagccagggactcatacaccccgtacagtgtgtgccatatctgatc
gccatggggacggacccagagcccaccatgaggaacaaagcggaccagcagctggtggag
attgataagaagtacactggatttatccatatgaaagctgtagcagggatgaagatgtca
taccaagtgcagcaggccatcttgggttcaacacgatctgtgatccgtggtttccgtcag
gacgagtccaattctgctcagtgttcccacctatacagcatggtccgtgcaaacagacaa
caccggcgagcgttcctcatctcactgctcaatctcttcgacgacagctcgaagatggaa
gtgagcatgctgttgttcatggctgataatctggcctacttcccctatcagactcaggag
gagccgctgttcatcatgcatcatatagacatcacactgtctgtatcaggcagcaacctg
ctgcagacatttaaagagtctcttgttaaggttccaggcagaaagagcaggaaaaggaga
cgacggcggcggcggccgcaacagcagcaacagcagaacggtgcggaggaggagagggga
gagcaggacgaggagaaagaaaggaacagcggagatgaagaatatgatggtgatgattat
gaggaggatgaggaggggcagcgagttaggaagcccaagcccatggaggttaccaggcag
tcagagtcagattctgagtctgacctcgaggatgctgatgctgtcatggagcgtctccct
gatgatgcagctcctctcctggactttgctagggcttcacagggcatactcttactgcta
gtgctcaaacaacaccttaagaacctctacggcttctcggacagcaaaattcagaagtac
tctcctacggagtcggccaaggtgtacgataaagcagtcaacaggaagtcatcggtcatc
ttcagcccacggcagaccatcgacttcctacacaatgatgaggttcatgacgagctgacc
tacgagctgaagaggaagattgtcaaacagtacctcgatttcaagttgctaatggagcac
ctggaccctgatgaagaggacgaggagggagagacgagtgcaaacgtgaggaataaagcc
atcaccgcactgctggggggagcggctacaagcccccgaaaccaccatacacttgactca
gaggatgaggagagtgacggagaggaaaggacaccaggggcgtctcgacgtgggaggcgc
acgggagattctgcggacgtgctgttggcgaacatgaatgagtctgtcagcgcgctcgat
atcatcgccatccactgccccaaataccgagaccggccgcagatagcacgtgtgatccag
aggaacagcgacggttacaacatccactggatggcaggctcgtactccagctcctggact
gaagcgaagcgccgtgatggacgcaagctggtgccttgggtggacaccatcagagagacc
gacatcatctataaaaaaattacactcaccagtggcaacaagctcaaccacaaagtggcg
cagactctacgttcactctacgctgccaaggacaggaactccagctaa
DBGET
integrated database retrieval system