Ctenopharyngodon idella (grass carp): 127512541
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Entry
127512541 CDS
T08802
Name
(RefSeq) toll-like receptor 3 isoform X1
KO
K05401
toll-like receptor 3
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04217
Necroptosis
cide04620
Toll-like receptor signaling pathway
cide05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
127512541
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cide04054
]
127512541
04090 CD molecules [BR:
cide04090
]
127512541
Pattern recognition receptors [BR:
cide04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
127512541
CD molecules [BR:
cide04090
]
Proteins
127512541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
Tlr3_TMD
LRR_9
TIR
TIR_2
Motif
Other DBs
NCBI-GeneID:
127512541
NCBI-ProteinID:
XP_051749488
LinkDB
All DBs
Position
1:17559363..17564648
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AA seq
829 aa
AA seq
DB search
MELMKLILLPLFYTCFHAHCAGSAYPHRSTCTIENAKADCSHMNLDVVPTNLPKNITTLD
VSHNRLKNLSSLLLYSNLVNVDASYNSLTAIEKDLCLSLPHLQILNVQHNEVYLMNEKVL
KNCFHLMRLDLSGNRLKLQGEPFSVLKNLTWLDVSRNKLKSAKLGTQPQLPNLVTLILSG
NEISALQKNDFSFLSNSSAFRVLILSSLSLKKVENGCFQAISRLSDLVLDWSRLSTQFTT
NLCEELAGTALRNLSLKNTFQVTLSDTTFKGLDKTNITVLDLSYNTMSKIADGAFQWFPR
LEFLSLEHNSLRHLTKDTFSGLGNLRQLNLQKALIKSHTSSLPIIEDFSFHHLVQLEHLC
MANTAFREITEHTFSGLLHLKTLDLSWSSTGLKTVTNKTFASLQESPLLETLNLTAMGIN
KLGPGAFSSLGNLTTLLLGRNFINQQLRGDEFEGLTSIKEIDMSINQQSISLTNTSFIHV
PTLRTLKLGRALKGTLDIEPSPFRPLVNITVLDLSNNNIANINDGMLRGLYHLKVLKMQH
NNLARLWKTANPGGPVFFLKDATKLSVLDLDYNGLDEIPLDALRGFSELHELSLRGNLLD
QLHASVFDDLQSLKYLHLQKNLITSVQRATFGVPLSNLTELYMDRNPFDCTCESILWFSE
WLNSTNASVPGFPQSYICNTPNAYFNRSVMYFDPLSCKDMTPFKALYIMTSTAVLMLLFT
AFLVHFQGWRIQFFWNIIVNRMLGSPKDESVTEGRYVYDAYIIHTAKDRPWVERSLLPLE
DENFNFFLEDRDAIPGFSQLNTIIENMGQSRKIIFVITEMLLKDPWCRQ
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggaactgatgaaactcatactgttgcccctgttctacacttgcttccatgcccactgt
gcaggctctgcatatccacacaggtcaacatgtacgattgaaaatgccaaagcagactgt
agtcatatgaatctggatgtagttccaacgaatttacccaaaaatatcaccacattggat
gtgtctcacaatagactaaaaaatctgtcttccttgcttttgtactcgaatctggtgaat
gtagatgccagctacaactctttaactgccatagaaaaggatctatgtctttctctgcca
cacctgcaaattcttaatgtgcaacacaatgaagtgtatttgatgaatgagaaagtcctg
aaaaactgttttcatttgatgcgacttgacctgtctggcaataggctgaagctacaaggg
gagcctttctctgttctaaagaatttgacatggttggatgtatctcgaaacaaactgaaa
tctgctaaactgggcacacaacctcagctgccaaacctggtgacccttattctttctgga
aatgaaatttctgcactgcaaaagaatgacttctcattcctaagtaattcctctgcattt
cgggttctgatactctcgtctctgtctcttaagaaggtcgagaatggctgtttccaggct
atttctagactatctgacttggttctggattggagcaggctcagcactcagtttaccact
aatctttgtgaagaacttgctggcacagccttgcgaaacctttcccttaagaacactttc
caggtgacactctcagacacgacttttaaaggtctagacaagactaacatcacagtgctt
gacctcagctacaacacaatgtctaagattgctgatggtgcctttcagtggtttccccga
ctggaatttttatccctggagcataactcccttagacacctaactaaggacaccttcagt
ggactgggaaacctgaggcagcttaacctgcagaaagcactgattaagagtcatacatca
tccttgccaattattgaagacttctcatttcaccatttagtccaattggagcatctgtgt
atggcaaatactgcattccgagagataacagagcacaccttctctggacttctgcacctg
aagacactggatttaagttggagcagcacagggttgaaaacagtcacaaacaaaaccttt
gcttctctgcaagaatcaccactccttgagactcttaatcttacagccatgggtataaac
aagttggggcctggtgccttctcaagtttgggcaacctcactacactcctacttggccga
aacttcattaatcagcagttgagaggggatgagtttgagggcctaactagcattaaagag
attgacatgtctataaaccagcaaagtatttcccttacaaatacgtcattcatccatgtc
cctacgttgaggactctaaagctaggtcgtgccctaaaagggaccctagatattgaacca
tctccattcaggccactagtcaacatcacagttctagatctcagtaataacaatattgca
aacataaatgatggcatgctgagagggctgtatcatctgaaagtgctgaaaatgcagcac
aacaacttggctaggttgtggaagacggccaaccctggtggtccagtgtttttcctcaag
gatgccacaaaactgtctgttctggatctggattacaatggcctagatgagattccactt
gatgctttgcgtggcttctctgagttacatgagctaagtctccgtggtaatctcttggat
caactgcatgcctctgtttttgatgacctacagtctttaaagtatttgcatcttcaaaag
aaccttataacgtccgtccaacgtgccacgtttggtgtgccgttgtccaacctgacagaa
ctttacatggaccgcaacccctttgactgcacctgcgagagcatcctgtggttttccgag
tggcttaactcaaccaatgcaagcgttcctggatttccgcaaagttacatctgcaatacc
ccaaatgcctactttaaccgctccgtcatgtactttgacccattgtcctgcaaggatatg
acaccttttaaggcactgtacatcatgactagcacagcagttttaatgttgttatttaca
gcttttctggtgcacttccagggatggagaatccagttcttctggaacataatagtaaac
cgtatgctggggtcgccgaaggatgaaagcgttactgaaggtagatatgtgtatgatgct
tatatcattcacactgctaaggacagaccatgggtggaacgaagcttgctccccctagag
gatgaaaattttaattttttccttgaagacagagatgcaatacctggcttttctcaactt
aacaccattattgaaaacatgggacaatccaggaagatcatttttgttatcacagaaatg
cttttaaaggatccatggtgtaggcagtaa
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