Ctenopharyngodon idella (grass carp): 127512553
Help
Entry
127512553 CDS
T08802
Name
(RefSeq) calcium channel, voltage-dependent, N type, alpha 1B subunit, a isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04010
MAPK signaling pathway
cide04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127512553
04020 Calcium signaling pathway
127512553
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cide04040
]
127512553
Ion channels [BR:
cide04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
127512553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
127512553
NCBI-ProteinID:
XP_051749512
LinkDB
All DBs
Position
5:complement(29093405..29210633)
Genome browser
AA seq
2358 aa
AA seq
DB search
MARFEDDLPTRYGGGGSPAGPGRGASRQPGPPGGPRVYKQTMAQRARTMAIYNPIPVKQN
CLTVNRSLFIFSEDNIIRKYAKKITEWPPFEYMILATIIANCIVLGLEQHLPALDKTPMS
KRLDDTEPYFIGIFCFEAGIKIIALGFAFHKGSYLRNGWNVMDFVVVLTGILTIVGPDFD
LRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFFAILMFAIIGLDFYMG
KFHRTCFRIDNGEQADDSPCGTDYPARMCEINVTECREYWTGPNFGITNFDNILFAVLTV
FQCITMEGWVDILYNANDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVE
KRQEFLKLRRQQQIERELTGYLEWICKAEEVMLAEEDKNAEEKEDGAWYKRKYNNPVLKR
AKKSKNDLINAEEGEDHFTDISSVAPQGSPFTRTSVKSSKNESSSYFRRKEKRFRFFIRR
MVKAQSFYWTVLCIVGLNTLCVAIVHYDQPDWLTYALYLAEFVFLGLFLIEMSLKMYGLG
PRTYFHSSFNCFDFGVIVGSIFEVIWAAVKPGASFGISVLRALRLLRIFKVTKYWNSLRN
LVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEDETPTTNFDTFPAAILTVF
QILTGEDWNAVMYHGIESQGGVHRGMFCSVYFIVLTLFGNYTLLNVFLAIAVDNLANAQE
LTKDEEEQEEAISKKLALQKAKEVKEVSPISAANISITAFIRPFPGALSCSSSNSSSHSP
KEQQRSLKMMSVWEQRTTQIRKHMLASSEALYQEELNPRLTSNLHLRPDIKTHLDRPLVV
EPRCDGPISPHRDWDKPQDLQGEGGTPEERVAPVMEPPQSHPPRKHHRHRERPSNETNEN
GDTGHAKDGRHHVHHSRSKEHDGTRCKEGKSDRSRSREGGRRHHHQSSVDEGVGGGEREH
RHHHSHRHNREGNGVVSAGGKSERRSRQKEGSRSGTREGERCSRGENGGNGGRRRHRPRT
SKAQSTLEGEEQQVNREKEDGKSASHRHMDIGGDSMAVNPNQPSVGNRWCLEKPEDSDNK
RNIGQTGGMGTHIPVTITSPPGETTLIPMNSIDSETMPMTEKNLEDLNQSSPRPILPFSS
MFIFSPNNPVRRLCHYIVSLRYFEMCILVVIAMSSIALAAEDPVQANAPRNNVLKYLDYV
FTGVFTFEMVIKMVDLGLLLHPGSYFRDLWNILDFIVVSGALVAFAFSSHQSVNRGTKGK
DISTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYILFMFIFAVIAVQ
LFKGKFFYCTDESKGLEKDCRGLFLDYDKDDVAAQPREWRKYEFHYDNVLWAFLTLFTVS
TGEGWPTVLKHSVDATFEDQGPSPGYRIEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQ
GDKALSECSLEKNERACIDFAINAKPLTRYMPQNQQSFQYRLWKFVVSPPFEYSIMIMIA
LNTVVLMMKFHGAPESYDAMLKYLNIVFTALFSMECVLKIIAFGPLNYLKDAWNVFDFVT
VLGSITDILVSEIKDRLLNLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCL
LIAMLFFIYAIIGMQVFGNIELNDETAINRHNNFQTFLQALMLLFRSATGEAWHEIMLSC
LSERTCDLQSGTYGKECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILG
PHHLDEFIRVWAEYDPAACGRIKYLDMYEMLLHMSPPLGLGKKCPPRIAYKRLVKMNMPI
ADDNSVHFTSTLMALIRTALEIKLASGMVAQRLSDAELKKELATVWPNLSQKTMDLLVTP
HKPNELTVGKVYAALMIFDYYKQNRAKRLQLQQQQQREQGGPGSQNKVSALLEPILPLTH
IQDQAMNSVDLASEFQAQTRPSSTTLNNGRTHLDNPIKGSSSWASEKSKEVQRSKRRPMS
RGQSEDASNANTAQESVEMMKMENSANTATSGGLEGQGRAVSMPKLNAEMQRSHSRHSPG
TLLEPIPDSPMRRSASTFAPQRPQEVNLNDYILEKPVQERHHHHHHHHRCHHRREREKKQ
RSLDRSPTDQHKATGTAADLVEERPHDRGRSHERKHHSSSAEKQRYYSCDRYGSREHCPS
KSAVASCATSPTEAQEANLNKQGSGWAKGSPVLLTSGASTPSRGRRQLPQTPLTPRPSVA
YRTANSSPVHFLGTQMGLLPPSPGRLSRGLSEHNALLYSGSISSSPAPVSRINSEPFLGP
PDHPAGLQPEAYAVFQEDLSAQTSRSARTVGIPIVTIPPPPQQLFRGVPNGYHFTTGPGT
SRGRARQYYPEGEVDDWC
NT seq
7077 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcttcgaagacgatctcccgacccggtatggaggcggtggctctccagcgggt
ccaggcagaggggccagccggcagccaggccccccgggcggaccgagggtgtataagcaa
acaatggcccaaagagcccggacaatggccatatacaacccaataccggtcaaacagaac
tgcctcacagtcaaccgatcccttttcatcttcagcgaagataatatcattcggaaatat
gcaaagaaaataacagagtggcctccatttgagtacatgattctcgccaccatcatagca
aactgcattgtactgggcttagagcagcatttgccagctttagacaagacacccatgtca
aagcggctggatgacactgaaccctacttcatcggaatattttgcttcgaggccgggatc
aagattatcgctctaggctttgcttttcataaaggctcctacctccgcaatgggtggaat
gttatggattttgttgttgtgttaacggggattctgaccatagtgggaccagactttgac
ttgcggacactcagggcagtgagagtcttgcggcccctcaaactagtgtctggaattcca
agtctccaagtggttctgaagtccatcatgaaagcgatgattcctctgcttcagatcggc
cttctgctcttctttgctattctcatgtttgccatcattggtctagacttctacatgggg
aagttccaccgcacctgcttcagaatcgataacggggaacaggcggatgattctccatgt
gggactgactatccagcccggatgtgtgaaatcaacgtaactgaatgtagggaatactgg
accggtccaaacttcggcataactaactttgacaacatcctgttcgctgtgctcaccgtc
ttccagtgcatcactatggaaggatgggtggacatcctttacaatgccaacgatgcttca
gggaacacttggaactggctctacttcatcccactcatcatcattggctctttcttcatg
ctcaacttggttctgggggtgctgtcaggggagtttgcaaaggagcgagagcgcgtggag
aaaaggcaggagttcctgaagctgcgaagacaacagcagatagagagggagctgaccggt
tacttggagtggatctgcaaggcagaggaagtcatgcttgctgaagaagataaaaatgca
gaggagaaggaggatggtgcctggtacaagaggaaatacaacaacccagtattgaagaga
gccaagaagagcaaaaatgacctcatcaatgcagaagaaggtgaagaccactttactgat
atctcatcagttgctccccagggctctccattcacccgtacaagtgtgaagagcagcaag
aacgagagctcgtcgtactttcgcagaaaagagaagaggtttcgcttcttcattcgacgt
atggtgaaggcccagagcttctactggaccgttctgtgtatagtgggactgaacacactg
tgtgtggctatagtccactatgaccagcccgactggctcacatatgcactgtatttggcg
gagtttgtgttccttggtctgtttctaatagagatgagtctgaagatgtatggcctcggg
ccaaggacctactttcactcctcatttaactgctttgactttggggtgattgtgggtagc
attttcgaggtgatctgggcagccgtaaaaccaggagcctcttttggcattagtgtgttg
cgagcactgcgtttgctgaggatattcaaggttaccaagtattggaactctctgcgtaat
ctggtggtgtctctactcaactcaatgaagtctatcatcagtctcctgttcctgctgttc
ctattcatcgtggtatttgctttgttggggatgcagctctttggaggacagtttaatttt
gaagatgagaccccgacgaccaactttgacacattcccagctgctatcctgacagtgttt
cagattctgacaggggaggactggaatgcagtgatgtatcatggaattgaatcccaggga
ggagtgcaccggggaatgttctgctccgtgtacttcattgtgctcacactgttcggaaac
tacactctcctaaatgtatttttggccattgctgttgataaccttgccaatgcacaagaa
ctcaccaaggatgaggaggagcaggaagaggccatcagtaagaaactggctctgcagaaa
gccaaggaggtaaaggaggtcagccccatttcggccgctaacatttccatcacagctttt
ataaggccatttcctggtgctctttcatgcagctcctccaactccagctctcattcacct
aaagaacagcaacgttctctaaagatgatgtccgtgtgggagcagcgcaccacccagatt
cggaagcacatgctggccagcagtgaggcattgtaccaagaggagctcaacccccggctg
acttccaaccttcacctccgccctgacatcaaaacccatctggaccggcctctggtggtg
gaacctcgctgtgacggccccatcagccctcacagagactgggacaaaccccaggatttg
caaggagagggtggcacgccggaggaacgagtagcccctgtgatggagcccccgcagtcg
catccaccgcgcaagcaccaccgtcacagggagcgtccctccaatgagaccaatgaaaac
ggtgacaccgggcatgccaaagatggccggcatcacgtccatcacagccgcagtaaggag
catgatggaacacggtgtaaggaggggaagagcgacaggagccggagcagagaggggggc
cgcagacatcaccatcagagctcggtggacgagggtgtgggaggtggggagagagaacat
cgtcaccatcactcccacaggcataacagggagggcaatggggtggtcagtgctggtggg
aagagcgaacgacggtccaggcagaaggaaggctcacgatcaggaacaagggagggagag
aggtgctccaggggggaaaatggaggtaatggagggaggaggcggcacaggccgcgaacc
agtaaagctcagtccacgctggaaggagaggagcaacaagtgaatagagagaaggaggat
ggcaagtcggccagccacaggcacatggacataggaggagattcaatggctgtaaatccc
aatcagccttcagttgggaaccgatggtgtcttgagaaaccagaagactcggacaacaag
cgaaatattggtcagactggagggatgggcacacacatacctgtgaccatcacgtctccc
ccaggagaaacaacccttattcccatgaacagtatagacagcgagacgatgcccatgact
gagaagaatctggaggatttgaaccagagcagccctcgtcccatcctccccttcagctcc
atgttcatcttcagcccaaacaatccggtgaggcgtctgtgccattacattgtgagtctg
cgctactttgagatgtgtatcctggtggtcattgccatgagcagtatagccctggctgca
gaggacccagtccaagccaatgctcctcgaaacaatgtcctgaagtatttggactatgtc
ttcactggtgttttcacatttgagatggtcattaagatggtggatttgggtttattgctg
catcctggttcctacttcagagatctgtggaatattctggacttcattgtggtcagtggt
gcactggtggcattcgcattctcatcacatcaaagcgttaacagaggaaccaagggcaaa
gacatcagcactatcaagtccctgagggtattgcgagttttgcgacctctgaagaccatt
aaacgtctaccaaaactgaaggccgtgttcgactgtgtggtgaactccctgaagaacgtg
ttgaatatcctcattgtctacatccttttcatgttcatcttcgctgtcattgctgtccag
ctcttcaagggcaagtttttctactgcacagacgagtccaagggcctggagaaagattgc
agagggctgtttctggattatgataaggatgacgtggcggcccagcctagggagtggagg
aaatatgagttccactacgacaatgtgctgtgggcgtttctcactcttttcaccgtttct
actggagaggggtggcccacggttttgaagcactctgtagatgccacttttgaggaccag
ggcccaagtccaggttaccgcattgagatgtccattttctatgtggtctactttgtggtc
ttccccttcttcttcgtcaacatttttgtggccttgataatcatcacattccaggaacag
ggtgataaggccttgtcagagtgcagtctggagaagaatgagagagcctgcattgacttt
gctatcaatgccaaaccgctgacccgctatatgccacagaaccagcagtcctttcagtac
cgcttgtggaagtttgtggtctctccaccatttgagtactccatcatgatcatgattgct
ctcaacactgtagtgctcatgatgaagttccatggggcacctgaatcttacgatgcaatg
ctcaagtatctcaacattgtcttcactgctctcttttcaatggagtgtgttctcaagatt
attgctttcggccccttgaattacctgaaagatgcctggaatgtgtttgactttgtgact
gtgctgggcagcatcaccgacatcttagtctctgagattaaagaccgtctgctgaacttg
agtttcctgaggctcttcagagcagccagactaatcaagctcctccggcagggatacacc
attcgcatcctgctctggacattcgtccagtcctttaaggcactgccttatgtatgcctt
ttaatcgccatgctgtttttcatctacgccatcattggaatgcaggtgtttgggaacatt
gaattgaatgacgagactgccatcaatcgtcacaacaactttcaaactttcctccaagca
cttatgctgttgttcaggagcgccactggcgaagcctggcacgagatcatgctgtcctgt
ctgagtgagcgcacctgtgacttacagtcaggcacctatggaaaggaatgcgggagtgac
tttgcctacttctactttgtctccttcattttcctctgctccttcctgatgttgaacctg
tttgtggctgtcattatggacaactttgaatatctgacacgtgactcctccatcctgggc
cctcaccacctggatgagtttatccgagtgtgggcggagtatgacccagccgcatgtggc
cgtatcaagtacctcgatatgtatgagatgctgctccacatgtccccacctttaggtttg
ggaaagaaatgccctccacgaatcgcctacaagcggctggtgaaaatgaacatgcccatt
gcagatgacaacagcgtgcacttcacctctaccctgatggctctgatccgcactgctctg
gagatcaaactggcatcaggcatggtggcccaacgtctgtcagacgcagaactcaagaag
gagctcgctacagtctggccaaacctgtctcagaagactatggacctgctggtcacccca
cacaaacccaatgagcttacagtggggaaggtgtatgcggctcttatgatctttgactat
tacaagcagaacagagccaaaagacttcagttgcagcaacagcaacagagagaacaggga
ggacctggatctcagaataaagtcagtgctctcttagagcccattctcccactaactcac
atacaagaccaggccatgaacagtgtagatttggcctcagagtttcaagctcagaccaga
cccagctccaccacgctcaataacggacgcacacatcttgacaaccctattaaaggatct
tcatcctgggcctcagagaagtccaaggaggtccaacggtctaaacgacggccaatgtcc
agaggtcaatcagaggatgcctcaaatgcaaacactgcccaggagtcagtagaaatgatg
aagatggagaacagtgccaacacagcgacctctggcggccttgagggccaaggacgtgcg
gtatccatgccaaaactcaatgcagaaatgcagaggagtcattcccgtcattctcctggg
acgttactggaacccattcctgattcccctatgagacgctctgcatccacttttgcacca
cagcgccctcaggaggtgaatctgaatgactacattttggagaaaccagttcaagaacga
catcatcaccatcaccatcatcatcggtgccatcatcgcagggaaagagaaaagaaacag
agatctctagacaggtcgcctactgaccaacacaaagctacaggcacagcagctgacctt
gtagaggagaggccacatgaccggggtcgctcccacgagaggaagcaccattcgtcttcg
gcagaaaagcagcggtattactcatgcgatcgctatggcagtcgggaacactgtcccagc
aagtctgccgtggcaagctgtgccacctcgcccactgaggcccaggaggccaatctcaac
aagcagggcagtgggtgggctaaggggagcccggtgttgttgacctcaggggcgagcact
ccaagccgtgggcgcagacagctgccccagaccccccttactcctcgtccctccgtggcc
tacaggactgccaactcctcccctgtgcactttctgggcacacagatgggcttgcttccc
ccaagtcccggcaggctgagccgcggtctgtccgagcacaacgccctattatacagcggc
tccatctccagctcgccggcccccgtcagtcgcattaactcagaacccttcttgggccct
ccggaccaccctgccggcctccagcccgaagcctacgctgtcttccaagaggatctgagc
gctcagacgagccgttctgcccggacagtagggataccgatcgtgacgattcccccacct
ccccaacagctgttccgcggagttcccaacggataccacttcaccacgggccccggaacc
agcagaggacgggcacggcagtactacccagagggagaggtggacgactggtgctag
DBGET
integrated database retrieval system
