Ctenopharyngodon idella (grass carp): 127512577
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Entry
127512577 CDS
T08802
Name
(RefSeq) topoisomerase I binding, arginine/serine-rich a
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127512577
03036 Chromosome and associated proteins [BR:
cide03036
]
127512577
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cide03037
]
127512577
Enzymes [BR:
cide01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127512577
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127512577
UBL E3 ligases
127512577
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
127512577
Cilium and associated proteins [BR:
cide03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
127512577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-C3HC4_4
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
127512577
NCBI-ProteinID:
XP_051749578
LinkDB
All DBs
Position
1:22498397..22506797
Genome browser
AA seq
879 aa
AA seq
DB search
MASPQIKERPSGVVLNTISKAASPESKCPICLDHFKNISYLDVCLHKFCFCCIHEWSKNK
AECPLCKQPFNSIYHTIKSEDNYKRFDLRPSENGSFGNMAGQRFRYRTTLTGDRRPAPRR
TSPPPDHGVIFEGLRGSLPQRHNRDLHSMIRRMAVRQRRESEGRSVQSLHEQEVVKFRRA
LYRRGVRVQSVQDGGRIRETSAEFFKRNPACLHRLVPWLRRELTVLYGTHGSLVNIVQHI
IMTLITRHNLDDQAVLHELRPFLLSHTEHFLHEFLSFAQSPFNMEAYDQRAVYDLPRPSG
ESSSSETSVIAISEDESDSLVSGAQDYATPRVTLSQTAWDDETPGPSYSSETSQVLPFHV
RDSDSDSSVGEAVASVTAVPHQDRPANTATFAVEEEDSPGSDEDCVIIGYVKPVAERTPE
LVQLSSDSEHSEQNAEPQSPRAPQHIRFTSESDLSPTVTQRPSVRPTRCSRSPDDTSTHL
RKEDKYGKRHHERELSGSREGSSHSNRTHSSSCSRKHPLSKESKHKWNQGKETSRHSSSY
WHSYSHYSQQGSSRRCYTETSSSYTSYYKSVYDHSHSRSHRRRRSRDREDRSNSRSTSRM
KSSSSSCQERRHSRSNSKTNSSHRRHRSHSESHSRIKSSNHQERSHSRSSSRIKSSSSNC
QDKSHSKSSSRYNFSNREVKSRSRSNSRINSSNCQDRSRSRSNSRINSNSSHQTSLHDEY
GRKRKYKTKHYEEPSRKSPSKLFADSAEEGAKKKNKKHHKRFKRKSRSPSVDDKSEGHSR
KHHKKKKKKHKRKSKRHNSEGRVGKHSPVLITITSDSDNADPNEPSTSNVCAASSTFTIA
NSATETHPPKSSFLDMEQQSTAGTEYSSVGDAGNHIQTD
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaccacagataaaggagcgcccatcaggtgttgtgttaaacacaatatcaaaa
gcagcatctccggaatcaaagtgcccaatatgcctggatcactttaaaaacatatcatat
cttgatgtgtgcctacataagttttgcttctgctgcattcatgagtggtcaaagaataaa
gcagaatgccccttatgcaagcagccatttaattcaatttatcacaccattaaatctgaa
gataactacaagaggtttgacctgcggccatctgaaaatggctcatttggcaacatggca
gggcaaagattcaggtatcgcaccacacttacaggcgaccgcagaccagcaccgaggagg
acgtctccccctcctgaccatggtgtcatatttgagggcctgagaggatctcttccacag
cggcacaacagagatctccatagcatgataaggaggatggcagttaggcaaagaagagag
agtgagggcaggtcggtgcaaagccttcatgaacaagaagtagttaaattcagacgagcc
ttgtacagaagaggagtgcgagtccaaagcgtgcaggatggtggccgtatcagggagacc
tctgcagagttctttaaaagaaatcctgcttgtctccacaggcttgtaccttggttgaga
cgagagttgactgttctgtatggcacccatggttcccttgtcaatatagtgcagcacatc
atcatgactctgattactcgacataacttggacgaccaggctgttctacatgagcttcgt
cccttcttgctgtcccacacagagcacttcctccatgagtttcttagctttgctcaatcc
ccgttcaacatggaggcatatgaccagcgtgctgtttatgacttgcctcggccctccgga
gagagtagcagttcagaaacatctgtgattgccatctctgaggatgagagcgattcttta
gtgtcaggagcccaggattatgccactcctagggtgaccttaagccaaacagcatgggat
gatgagaccccagggccatcctactcttcagagacatctcaggtattacctttccatgtg
agggactcagactctgatagtagtgtaggggaagcagtagcgtctgttactgctgtacca
catcaggaccgtccagcaaatactgccacttttgcagtcgaagaggaggattcccctggc
agtgatgaagactgtgttattatcggctatgttaagccagtggcagaaagaacaccagaa
ctggtccagctttcttctgattccgaacattctgagcagaatgcagagccgcaaagccct
cgagcaccccaacacattcgttttacttcagagtctgatttgtcacccactgtcactcag
agaccctcggtgaggccaacaaggtgctctcgctcacctgatgacacctctactcacctt
agaaaagaagataaatatggtaaaaggcatcatgaaagggagttgtcgggatctagagaa
ggatcctcacacagcaacaggacacactcttcctcttgtagcaggaagcacccattgtct
aaagagagcaagcataagtggaaccaaggaaaggagacaagtcgccacagctcttcttat
tggcattcatatagccattatagtcagcaaggcagcagcaggagatgttatacagagaca
agctcatcctacaccagctactacaaaagtgtatatgatcactctcattctcgatcacac
agaagaaggcgaagcagggatcgtgaggacagaagtaattcaaggagcacttccagaatg
aagtccagctcctccagctgtcaggaaagaagacactcgaggagcaattctaaaaccaac
tcttcacatcgtcggcacagaagccactctgaaagccattctagaatcaagtcttccaat
catcaggaaagaagtcactcaaggagcagttctagaatcaagtccagctcctccaattgt
caggacaaaagtcactcaaagagcagttcaagatacaacttctccaatcgtgaggtcaaa
agtcgctcaaggagcaattctagaatcaactcttccaactgtcaggatagaagtcgctca
aggagcaattctagaatcaactccaactcctcacatcagacatcactgcatgatgaatat
ggcaggaaaagaaagtacaaaacaaagcattatgaggaaccctcaaggaaaagtcctagt
aagttgttcgccgattccgctgaagaaggtgcaaaaaagaaaaacaagaagcatcacaaa
aggttcaagaggaaaagtaggagtccaagtgtagatgacaaatctgagggtcacagtagg
aaacatcacaagaagaagaaaaagaaacacaagaggaagagcaagagacataatagtgag
gggagggtgggaaagcatagccctgttctgattacaataactagtgacagtgacaatgct
gaccccaatgaaccttcaacaagtaatgtctgtgcagctagctccacttttacaatagca
aacagtgctacagaaactcatccgcccaagtctagtttcctagacatggagcaacagtca
actgctggaactgaatatagttcagtgggtgatgcagggaatcacatccagactgattaa
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