Ctenopharyngodon idella (grass carp): 127512745
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Entry
127512745 CDS
T08802
Name
(RefSeq) scavenger receptor class F member 2
KO
K24319
scavenger receptor class F member 2
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cide04990
]
127512745
Domain-containing proteins not elsewhere classified [BR:
cide04990
]
Laminin domain-containing proteins
Laminin EGF-like domain-containing proteins
127512745
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
EGF_TEN
EGF_PEAR1L
EGF_C8A_B_C6
EGF_2
EGF_Teneurin
EGF_STAB1-2
Motif
Other DBs
NCBI-GeneID:
127512745
NCBI-ProteinID:
XP_051749923
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Position
5:complement(38105599..38139218)
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AA seq
926 aa
AA seq
DB search
MLSRRGAWRDAVSSTMDLKGTLAVLVLLLLCLCPVFSQELNPKGRNVCKVSGSSGVTCCS
GWAQQGEECLTPLCEGNFTCNENEVCVRPNECRCRHGYFGASCDTKCPAQFWGPDCKGMC
TCHPNGKCDDVTGQCTCYPNRWGENCEKPCNCQKGKCDQETGKCTCHAGYWGPQCNNNCY
CSINSVCDQSTGRCICNPGWYGRNCGAQCLCNNSPCEQFTGRCQCRERLWGQRCERYCQC
VHGKCNPADGSCTCKPGYRGKLCREPCPAGLYGQNCKNRCGHCKGQQPCKVTDGRCVTCE
SGWNGTKCDQMCMQGYFGENCKDQCPPCKDGHFCNRIDGKCSHCNPGWIGDRCDVRCPNG
TYGENCEKDCSHCFNGDCHFATGECLCDPGFYGTYCNLTCEFGQYGVNCAETCPCHDKNC
NPVSGACNLYPNQRRGVIAAGTLVTFLLVVLLCLLCCCFLCSNKDNRNPDQENSTNSKKA
KIILCGGFSRISTKLPRIPLRRQKLPKVVVTHHDPENTFNSIIEPPSVVDQPSPSWSSQE
SFSSFETSEDGPVYCIPHEETMNESCEKQNSSAAQEISSTPNDEDAGEYTSLKDTRETTK
QYVSDGSEQPLLKSSDSEGSTSGSESTIGAVYAHVARLSKQSKEEEDTASPEKTKEKTKP
RPPDPSTKPKVSWIHGTSGTNPTEQSQTPSPQKDKKNNNSEGSGKADEKQRSKEKSSKNR
EKNQDSKKADGPESPSKSKSHKASDTIEHLNGTFQNALKKIGNFHSDKKTIDTNKDPPKS
PKIMHPHMNSEAATLLAAQLKEKTQSLNRNEGFTVGIKPNGVSTPQANREKPTPPQKTKR
SATGTNKPLLPTSSNLQKMVAPISDSSPEPKSPEKQGVNGTRVEGDATPKKTPIKKPPRK
KGKEGTLETEGKTTPKTAIMPPQTVK
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgctgagcagaagaggcgcatggagagatgctgtttcttctaccatggatctaaagggc
actttagcggttttagtgcttttgcttctatgtttgtgtccagttttcagtcaagaactc
aatccaaagggtaggaacgtgtgcaaagtttcagggtcatcaggggttacgtgttgcagc
ggatgggcgcagcaaggtgaagagtgtttaacacctctctgtgaaggcaacttcacttgt
aatgagaacgaggtgtgtgtccgtccaaacgaatgccgctgtcgccatggatattttggg
gcaagttgtgatacaaagtgtcccgctcagttctggggtccggactgcaagggcatgtgc
acgtgccaccctaatggtaaatgtgatgacgtgactgggcagtgcacgtgctaccccaac
cgctggggtgaaaactgcgagaagccctgcaactgtcagaaagggaaatgtgaccaggag
acagggaaatgcacctgccatgccggttactggggacctcagtgcaacaacaactgctac
tgcagcatcaactctgtgtgcgatcagagcacgggccggtgcatctgcaaccctggctgg
tacggccgtaattgcggtgctcagtgtctgtgtaataactcgccttgtgagcagtttaca
ggccgatgtcagtgtagggagaggctctggggtcaacgttgcgagcggtactgtcagtgc
gtgcatgggaagtgtaacccggcagatggatcgtgtacctgtaaacccggatacagagga
aagctatgccgggagccatgtccagctgggctctacggacagaactgcaaaaacagatgt
ggccactgtaaaggccagcagccctgtaaggtgacggacggtcgatgtgtaacgtgtgag
agcggctggaacgggacaaaatgtgatcagatgtgtatgcagggatacttcggagagaac
tgtaaagatcagtgtccgccgtgcaaagacggtcacttctgcaaccgcatcgatgggaag
tgttctcactgcaatcccggctggattggagatcgctgtgatgtgcgctgtcctaacggc
acctatggagaaaactgtgaaaaagactgcagccattgttttaatggagactgccatttt
gccacaggagagtgtctctgtgaccccggcttctatgggacatactgcaacctgacctgt
gagttcggtcagtacggagtgaactgtgccgagacctgtccatgtcacgacaagaactgc
aacccagtgtcaggggcctgcaatctatatcctaatcagcggaggggagtaatagctgcg
ggaacgctggtaacattcctgctggtggttcttctgtgtctactgtgctgctgcttcctc
tgtagcaacaaagacaaccgcaaccctgaccaggaaaactccaccaacagcaagaaggcc
aaaataatcctctgtggtggattcagtcgaatcagcaccaaactgcccagaatccctctg
aggagacagaaactacccaaagttgttgtcacccaccacgatcctgaaaacaccttcaac
agtattatcgagccgccctccgtggtggaccagccttctccatcatggtcttcccaggag
tccttctcttccttcgagacgagcgaagatgggcctgtttactgcataccccacgaagag
actatgaacgagagctgtgagaagcaaaattctagtgctgctcaagaaatatcatcaaca
cccaatgatgaggacgcaggagagtacacgtccctcaaagacacaagagaaacaacaaaa
cagtatgtcagcgatgggagcgagcagcctctcctgaagtcttcagacagtgagggctcc
accagtggttctgagtcaaccataggagcagtttacgcccatgtcgcccgcctttccaaa
caatccaaagaggaggaggacactgcctcaccagagaagacgaaagagaagacgaaacct
cgtcctccagatccttccaccaaaccgaaggtgtcctggatccacggaacatcaggaacc
aacccaacagagcaaagccagactccatcaccacaaaaagacaagaagaacaacaactca
gaaggttctggaaaggctgatgagaagcagcggtcaaaggagaagtcgagcaagaacaga
gaaaagaatcaggatagtaagaaggcagatggacccgaatccccaagcaaaagcaaatct
cacaaagcttcggataccatagagcacctcaacggaacattccagaatgccctgaagaag
attggaaacttccactcggacaagaaaacaatcgacaccaacaaagatccacccaagagc
ccaaagatcatgcatccgcacatgaactctgaggccgccacgctactcgcagctcagctg
aaggagaagacccaaagccttaatcggaatgagggtttcacggtgggcatcaaacccaat
ggtgtttcaacacctcaagccaaccgagagaaacccacccctcctcaaaagaccaagcgc
tctgcaactgggaccaacaagccccttcttcccacctccagcaacctccagaagatggtg
gctcctatttcagactcatctcctgaacctaaaagcccggaaaaacaaggggttaatggg
accagagttgaaggagatgccacaccaaagaaaacacccatcaaaaaaccaccgaggaag
aaaggaaaggagggaacactggagacggaaggcaaaaccactccaaagacggccattatg
ccacctcagactgtcaaatag
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