Ctenopharyngodon idella (grass carp): 127512765
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Entry
127512765 CDS
T08802
Name
(RefSeq) PDZ and LIM domain protein 5a isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
127512765
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
cide04990
]
127512765
Domain-containing proteins not elsewhere classified [BR:
cide04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
127512765
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Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
LIM_FHL2-3_N
PDZ_2
Motif
Other DBs
NCBI-GeneID:
127512765
NCBI-ProteinID:
XP_051749967
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All DBs
Position
5:39697534..39761949
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AA seq
559 aa
AA seq
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MSGKYSVVLQGPAPWGFRLQGGKDFNMPLSISRLSDGGKAAKAGVAVGDLVLSIDGISTD
GMNHLEAQNKIKASTDKLNLALQKASSLPKPAVAPKDHSVEIIKPVPMATSIPSSSDITN
STHITSSSNRGARPFGGAGSPHIASIPSAASAFALASSAQSPNPLAPPTPVDGSPNHIPV
VPRPSVYNTPINLYSNENACEVAMGQRRGLLESQGESSQLNGKPPVNRLPRKPITETDIE
FYHVPTHGDASRKRIMQDTEDWRPRTGTSQSRSFRILAQITGTESELDQSQEAESAKKTT
NEELDDSQPSAHVTCPVKTMTKAPGTPVRNTTGLITPTFGVVSNSTPLGPALDRPMPRPH
PKDEASLVQMAEHIPAGTRTPMCAHCDMVIRGPFLMAMGKSWHPEEFTCAHCSVSLSELG
FVEEQGSVYCQHCYEEFFAPTCARCQYKILGEVINALKQTWHVYCFLCASCQQPIRNDTF
HLEDGEPYCERDYYSLFGTGCRGCDFPIEAGDKFLEALGGTWHDTCFVCSVCSVSLEGQT
FFSKKNKPLCKKHAHTLKI
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtaaatacagtgtggtgttacagggtccggccccatggggcttcagactgcag
ggggggaaagacttcaacatgcctctctccatttcacggctctcggatggaggaaaggct
gctaaagcaggagtcgctgtgggagatctggtcctgtccatcgatggcatcagcactgac
ggcatgaaccaccttgaggctcagaataagattaaagccagcacagacaaactcaacctc
gctttacaaaaagcttccagtcttccaaaaccagctgtggcaccaaaggatcattctgtg
gaaattatcaaacccgttcctatggcaacctccattccatcttcctctgacatcacaaac
tccacccatatcacttcatcctccaataggggcgctcgtccgtttggaggggcggggtca
ccacacatagcctccattccctctgccgcatctgcttttgcactcgcctcctcagctcaa
agccctaatccactggctccgcctactcctgttgatggctcaccaaatcatataccggtg
gtgccccgcccatcggtgtataacacgcccatcaatctctactccaatgagaatgcctgt
gaagttgccatgggccagaggcggggcctgctggaaagccagggtgagagctctcagctg
aatggaaaacctccagttaacagacttcctcgtaagcctatcacagagacagacattgag
ttttaccacgtcccaactcacggtgatgccagcaggaaacgcatcatgcaggacacagag
gactggcgcccacggacagggacttcacagtcccgctcattccgtatcctagcccaaatc
actggcactgaatctgaactcgatcagtcacaggaggctgaatcagcaaagaagacaaca
aatgaggagctggatgattctcagcccagcgctcatgtcacctgtcctgttaagaccatg
accaaagccccaggaacacctgtcagaaacacaacaggtctcattactcccacttttggt
gtcgtgagcaacagtacacctttgggccccgccttggaccggcccatgccccgcccacac
ccaaaagacgaagcctcattggtccagatggcagaacacatccctgctggaacacgcact
cctatgtgcgctcactgcgacatggttatcagggggccgttcctgatggcgatggggaaa
tcatggcacccggaggagttcacatgcgctcactgcagcgtgtctctgagcgagctgggt
tttgtggaggaacagggctctgtctactgccaacactgctacgaagagttctttgctccg
acctgtgcacgctgccagtacaaaatcctgggggaagtgatcaatgcgctcaagcagacc
tggcatgtgtattgcttcctgtgtgcatcctgccagcaaccgataagaaacgatactttt
cacctcgaggatggagagccatactgtgagagagattactacagtctgtttgggacgggc
tgccgtggctgtgatttcccaatagaagcaggagacaagtttctagaggccctgggcggc
acctggcatgacacctgcttcgtgtgctcagtttgcagcgtcagtctggagggccagacc
ttcttctccaaaaagaacaaaccgctttgcaagaaacacgctcacactctcaaaatataa
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