Ctenopharyngodon idella (grass carp): 127512768
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Entry
127512768 CDS
T08802
Name
(RefSeq) ubiquitin-protein ligase E3B isoform X1
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127512768
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127512768
Enzymes [BR:
cide01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
127512768
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
HECT type E3
127512768
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
127512768
NCBI-ProteinID:
XP_051749978
LinkDB
All DBs
Position
5:complement(33708673..33723381)
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AA seq
1075 aa
AA seq
DB search
MFTATQTSKSQFLDKARIAREERKGYKEKERAATQIQALVRRFLCRCRLQREIRKEVDDF
IAVSDAGSTKRNALSIFKIARKLLFILSKEDKLRFEKLCRIILSSMDVENEPKVSLNQAV
WYVSLALSKDLTIPWLKQIKDVLWVSCEFLKKLKPDILQDNKLVTLHLTMLITFTDTSTW
KIIRGKGEALKPALNRICENIMGHLNQKGFYSVLQILLTNGLARSRPSLSKGTLTAIFTL
SLRPVVAAHFSDNLLRSFLLHIMSVPAFISHLNTLTPDCMVTMQTHDLFRKFVLFLSREE
QCLDICVCLEGSHTLCLLGNLIQLGYFNVKVLEQEAGHFVKDLTDMLSYCQRYVSQKKSN
LTHWHPVLGWFSQTVDYGLNESMPLVTKQLQCLWGVPVICTLFCDVLSKKLETQDPTPPP
PPQPSSLQNNLPVKNLFKRAFQKSASVRNILKPVGGKRVDSAEVQKVCSICVLYQTALTT
LTQIRLQILTGLTYLDELLPKLWAFICELGPQGGLRLFMECLNNDTEESKQLLAMLMLFC
DCSRHLITILDDIEVYEEQISFKMEELVTISSFLNTFVYKMIWDGILENAKGEKLDLFHS
VHGWLMVLYERDCRRRFTPEDHWLRKDLKPSLLFQELEKGKRRAQLLLQYIPHVIPHKNR
VLLFRNIVTKEKETLGLVETSSASPHVTHITIRRSRMLEDGYDQLRRLPVNSIKGVIRVK
FVNDLGVDEAGIDQDGVFKEFLEEIIKKVFNPALNLFKTTSGNERLYPSPTSSIHENHLQ
LFEFVGKMLGKAMYEGIVVDVPFASFFLSQVLGHHHSTFYSSIDELPSLDSEFYKNLTSI
KRYDGDVSDLGLTLSYDEEVMGQLVCHELIPGGKTMPVTNENKISYIHLMAHFRMHTQIK
EQTAAFIRGFRSIINPEWLHMFSTPEVQRLISGDNAEIDLDDLKKHTVYYGGFHSSHRVI
LWLWDILSSDFSPEERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGS
VLRGFFTIRKKEPGGRLPTSSTCFNLLKLPNYSKKSILRDKLRYAISMNTGFELS
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atgttcaccgctacccaaacgtccaaatcccagttcctggataaagccaggatagcacgg
gaggaacggaaaggttataaggagaaagagagagctgccactcaaatccaggccctggtc
agaagattcctctgccgttgcagattgcaaagagaaatcaggaaagaggtggatgacttc
attgcagtcagtgatgcaggttcaacaaaaagaaatgcattatccatcttcaaaattgct
agaaaattgttatttatattgagcaaggaagataagttgagatttgagaagttgtgtaga
atcatactaagtagcatggatgttgagaatgaacctaaagtaagtcttaaccaagcagta
tggtatgtatctctggccctttcaaaagatctcaccatcccctggctgaaacagatcaaa
gatgtcctttgggtttcctgtgaatttctgaaaaaactgaagcctgacatactgcaagat
aataaattggtgacgctgcacctgacaatgctgataacattcactgacacatcgacatgg
aaaatcatccgaggaaagggggaggccctcaagcctgctttaaacaggatttgtgagaac
atcatgggacatctcaatcagaagggcttctactctgttcttcagattctacttacaaat
ggattggcaagatccagaccttccctttccaaaggaaccctcactgccatttttacgctg
tcactcaggccagttgttgctgcgcatttctcagacaacctgctgaggtctttcctcctc
cacatcatgtctgttccggcgttcatctcgcacctcaacacactcactccagattgtatg
gtcaccatgcagacccatgacctctttcgcaagtttgtcttgtttttaagccgagaggag
cagtgtttggatatctgtgtgtgtctggagggaagccacactctgtgcttactaggtaac
ctcattcagctgggatactttaatgtaaaagttctagagcaggaagctggtcactttgtc
aaggatctgacagatatgttgtcatactgtcagagatatgtgtctcaaaagaaatccaat
ctcacacactggcacccggtgttgggttggttctctcagactgttgactatgggcttaat
gagtctatgccgttggtaacaaaacagttacaatgtttgtggggagttccagtgatctgc
actctcttctgtgatgttctcagcaaaaagctagaaactcaagatcccacaccaccaccc
cctcctcagccaagctcattacagaataacctgcctgtcaaaaatctgttcaagagagcg
ttccagaagtctgcatctgtgcggaacatcctgaaaccggtcggggggaagcgtgtggat
tcagctgaggtccagaaggtgtgcagtatttgtgtgttgtatcagacggcactcaccacg
ctcacgcaaatccgcctgcagattctcacaggactgacgtatctggatgaactgctgcct
aagctgtgggcatttatctgtgagcttggccctcagggaggactacgactcttcatggag
tgtctcaataatgacacggaagagtccaaacagctcctggccatgctgatgctcttctgt
gactgttccagacatctcatcacgattctggatgacatagaggtgtatgaggaacagatt
tcttttaaaatggaagagctagtcaccatctcctcgtttctcaacacatttgtgtacaag
atgatctgggatggtattttagagaatgccaaaggggagaagttggacttattccacagt
gttcatggctggctgatggttctgtatgagcgggactgtcgcaggagattcacgcctgaa
gatcactggctccgcaaagacctgaagcccagcctgttgttccaggagctggagaaaggc
aaaagaagagcacagctgctacttcagtacattcctcatgtcatcccacacaaaaatagg
gtgctgctgttccggaacattgtgacaaaagagaaagagactctaggattggtggaaacc
agctcagcctctccccatgtgacccatataaccattcgacgctcacgcatgttggaggat
ggttatgatcagctgcggcgtctacctgtcaattccattaaaggagtgattcgagtgaag
tttgtgaatgatttaggagtagatgaggctggaattgaccaggatggtgtgtttaaagag
tttttagaagagatcatcaagaaggttttcaacccagctctcaatctatttaagaccaca
agtgggaatgagagattatacccctccccaacttccagcatccatgagaaccaccttcag
ctgtttgaatttgttggaaaaatgctgggaaaggccatgtatgaaggcatcgtggtggac
gtgccttttgcctcttttttcctcagtcaggttctaggtcaccatcacagcactttctac
agctccatagacgagctgccctccctcgactcagagttctacaaaaacctcacctctatc
aagcgttacgatggggacgtcagtgatctgggtctgactttatcctatgatgaagaggtg
atggggcagttagtctgtcatgagctaattcctggtggaaagactatgcctgtcactaat
gaaaacaagatcagctacatccacctgatggcccactttcgcatgcacactcagatcaag
gagcagactgcagcattcatcaggggcttccgcagcatcatcaacccagagtggctacac
atgttctccacccctgaggtccagaggctcatctctggagacaacgctgagatagacctg
gatgatctcaagaagcacactgtgtactatggaggtttccatagcagccacagagtcatt
ctttggctatgggacattctctccagtgacttctcccccgaggagagagccatgttcctg
aagtttgtcaccagctgctcacgacctcctctgctcggttttgcctacctcaaaccccct
ttctccatccgctgtgtggaagtatctgatgatcaggacacaggtgacactctaggcagt
gttctccgtggatttttcaccatccgtaaaaaggagccaggtggtcgccttcctacatcc
tccacttgtttcaaccttctcaagctgcccaattacagcaagaagagcatcctcagagac
aaactccgctacgcaatcagcatgaacactggctttgagctttcataa
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