Ctenopharyngodon idella (grass carp): 127512790
Help
Entry
127512790 CDS
T08802
Name
(RefSeq) calpain small subunit 1a
KO
K08583
calpain, small subunit 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cide01002
]
127512790
Peptidases and inhibitors [BR:
cide01002
]
Cysteine peptidases
Family C2: calpain family
127512790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
CAPN13-like_C_EFh
Gag_FV_central
Motif
Other DBs
NCBI-GeneID:
127512790
NCBI-ProteinID:
XP_051750064
LinkDB
All DBs
Position
5:22806139..22813370
Genome browser
AA seq
216 aa
AA seq
DB search
MFLAKKLLGGIIDVVSNIDPGQFVPSDPPPPRRPLAYAEANESEEEKQFRRVFQQLAGDD
MEVSPNELMNILNRIISKHGDLKTDGFTIESCRSMVAVMDSDSTGKLGFHEFKHLWNNIK
KWQAVYKSYDRDHSGTIGADELPAAFRAAGFPLNDQLFQMIIRRYSDESGNMDFDNYIGC
LVRLDAMCRAFKTLDKDNDGTIKVNVQEWLQLTMYS
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgttcctagccaagaaactccttggaggcattattgatgtggtcagcaacatcgacccc
ggccagtttgtgccttcagatcctcccccaccccgcagaccgctggcttatgctgaggcc
aatgagtctgaggaagagaagcagttccgtagagtgttccagcagctcgctggcgatgac
atggaagtaagtcccaatgaactgatgaacatccttaacagaatcatctccaaacatggt
gatctgaagacagatggctttactattgagtcatgtagaagtatggtggctgtcatggat
agtgacagcacaggtaaattgggcttccatgagtttaaacacctctggaacaacatcaag
aaatggcaggcagtttataagagttatgacagggatcactcaggaactattggagcagat
gagcttccagctgccttcagagctgcaggtttcccattgaatgatcaactctttcagatg
attattcgcagatatagcgatgagagtggaaacatggattttgacaattacatcggatgc
cttgtgagacttgatgccatgtgccgtgccttcaagactcttgacaaagacaatgatggc
acaatcaaggtcaatgttcaggagtggctgcagctgacaatgtactcctga
DBGET
integrated database retrieval system
