Ctenopharyngodon idella (grass carp): 127512826
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Entry
127512826 CDS
T08802
Name
(RefSeq) E3 ubiquitin-protein ligase CHFR isoform X1
KO
K10644
E3 ubiquitin-protein ligase CHFR [EC:
2.3.2.27
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127512826
Enzymes [BR:
cide01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127512826
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127512826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CRD
FHA
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-CCHH
zf-RING_6
Yop-YscD_cpl
zf-rbx1
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
127512826
NCBI-ProteinID:
XP_051750125
LinkDB
All DBs
Position
5:complement(34688950..34705154)
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AA seq
655 aa
AA seq
DB search
MAHQGRGQAWGKLVKVDASPGSEILLINRECTVGRKKDCDLSFPANKLVSGNHCKITQDQ
LSGKVWLEDMSTNGTVINMSKVVKKQTHLLQNGDVIYFVYRKNEPEQNIAYVYQAIRPEE
SASQGAEDAGREEDSDLTETESEPAPVEPVIVKPLPQSGHEDPQPSTSSSSFHFYNMSLS
TCSADVSAKKNPVSSLVVRKAESEMTAPAGSPGEPVMNHTCLKWTYWTEGGQQTEPEVEI
QRKRRKIDRDDQNEFGSSLSDSAVSAAAPQGPIEGAVGKEKTEGATTDKMEESLTCIVCQ
DLLHDCVSLQPCMHTFCAACYSGWMERSSFCPTCRCPVERIRKNHILNNLVEAYLLQHPE
KCRSEDDLRSMDARNKITQDMLQPKVERSFSDEEGSSDYLFELSDNDSDISDMSQPYMMC
RQCPGYRKELSSALWICEPAQSEGPAKVPGDGPSTSSDTSTASQEFRCPPQGSHLICTCC
LQPMPDRRFEYLPPQMSPQHCMVCQKPFCHVYWGCQRIGCHGCLSRFIELNLNDKCLDGV
FNGNQYESEVLQNYLTSRGMSWRHMLQEALQAVQQGLYHLSDYRITANSFLCYCCGLRTF
RELAYKYRERIPPTELPDAVTTRPDCYWGRNCRTQVKAHHALKFNHVCEQTRFKN
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggcacatcagggcagaggtcaggcctgggggaaactggttaaagttgacgcatctccg
ggttcagagatattgctcataaatagggaatgcactgtgggaagaaaaaaagattgtgac
ctctcatttccggctaataaactggtctcagggaatcattgcaaaatcactcaagatcag
ctctcaggaaaggtgtggctggaggacatgagcaccaatgggacagtgatcaacatgtcc
aaagtggtgaagaaacagacgcacttactgcagaatggtgatgtcatttactttgtgtac
aggaagaatgagccagagcaaaacattgcttatgtttatcaggccatcaggccagaagaa
agtgcctcacagggcgctgaagatgctgggagagaagaagattctgatctgacggaaacc
gagagtgaaccagcaccagtagagcctgttattgtgaagcctctacctcagtctgggcat
gaggacccccagccatctacctccagctcgtccttccacttctacaacatgtccttatct
acctgctctgcagatgtgtctgcaaagaagaacccagtcagttctttggttgttcgtaaa
gcagaatcagagatgactgcaccagcaggcagccctggggagccggtcatgaatcacacc
tgcctgaagtggacctactggactgagggaggacagcagacggagccggaggtggaaata
cagaggaaaagaagaaaaattgacagagatgatcagaatgagtttggatcttctctcagt
gactctgctgtttctgcagcagctcctcagggccctatcgaaggagcagtgggaaaagag
aaaactgaaggagccacaacagacaagatggaagaatccctcacatgcatcgtctgccag
gacctgctgcatgactgtgtcagtcttcagccctgcatgcacacattttgcgctgcctgt
tattctggctggatggaacgttcctccttctgccccacctgccgatgtcctgtggagaga
atccgtaaaaaccacattctcaacaacctggtggaggcttaccttcttcagcacccagag
aagtgtcggagtgaagatgacttgcgtagcatggatgcccggaacaagatcacgcaggac
atgctgcagccaaaagtcgagcgctccttctcggacgaggagggcagttcagactatcta
tttgagctctcggataatgacagcgacatttctgacatgagtcagccctacatgatgtgt
cggcagtgtccgggctatcggaaagagcttagctccgccctgtggatatgtgagcctgct
caatcagaggggccagcaaaagtacctggagacggcccctccacatcctctgatacctcc
acagcttctcaggaattcagatgtcctcctcagggcagtcacctcatctgcacctgctgc
ctgcagcccatgcctgatcgacgcttcgagtaccttccccctcagatgtccccgcagcat
tgtatggtgtgccagaaacctttctgtcatgtgtactggggctgccagaggatcggttgt
cacggctgcttatcacgtttcatcgaacttaaccttaatgataaatgtctggatggagtt
tttaatggcaatcaatatgagtctgaagtccttcagaactacttgacttctcgaggaatg
agctggaggcacatgctacaggaagcgctccaggctgtacagcagggcctgtaccatctc
tctgattacagaattactgccaactctttcctgtgctactgctgtggacttcgcactttt
agagagctggcatacaaatacagagagcgtattcctccgacagagctgccagatgctgtg
accaccagaccagactgttactggggacgcaactgtcggactcaagtgaaagcacaccat
gctctgaaattcaaccacgtgtgcgagcagacgcgttttaagaactaa
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