Ctenopharyngodon idella (grass carp): 127512929
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Entry
127512929 CDS
T08802
Name
(RefSeq) southpaw
KO
K04666
nodal
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04060
Cytokine-cytokine receptor interaction
cide04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
127512929
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
127512929
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cide04052
]
127512929
Cytokines and neuropeptides [BR:
cide04052
]
Cytokines
Transforming growth factors (RSTK binding)
127512929
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TGF_beta
TGFb_propeptide
Motif
Other DBs
NCBI-GeneID:
127512929
NCBI-ProteinID:
XP_051750265
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Position
5:3176709..3184031
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AA seq
407 aa
AA seq
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MLIRPIILFATLVASLIQVECVKIDNPGALMRGSYSDYSLQSYPRYPLYMMQLYRDFSGK
MATTPARVDSPTLQQSDFVLSLIAQDCHQTGERWTVTFDMSSLSASDNIQLSELRIRLPA
FSTSRRVIVDIFHLRKQDCESDSVFCRDKRLFLGSIKSVPGTPTSTWRVFNVTELLEHWL
NQGTEAPEQVPTPADGEDTGSGEDLTVDTGSGGGLIEPVTKSRRRKIQHPTAERVMIVVF
YKNQFSHSGQRASSLINTVAHSKYVILNRAPDAAQGRRQKRNRVERMRVQTDDRNATGIE
QQQGMLCRRVDMWVDFDQIGWDEWIVHPKRYNAYRCEGECPSPLDESFNPTNHAYMQSLL
KLYHPERVTCPSCVPTRLSPLSMLYYEGDGVVMRHHEDMVVEECGCQ
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgttgatccggccaatcatattgttcgctaccttggtggcttctctgatacaagtcgag
tgcgtgaagatcgataatcccggcgcgctcatgagaggctcatattccgactacagtctc
cagtcgtatccgaggtacccgctgtacatgatgcagttatacagagacttcagcgggaag
atggcaactactccagccagagtcgacagcccaactcttcagcagtctgacttcgtccta
agcttgattgctcaagactgtcaccaaactggtgagcgatggaccgtcacttttgacatg
tcttccctctcagcgagtgacaatattcaactttcggagctccgcatccgtcttcccgcc
ttttctacatccaggcgcgttattgttgacatcttccacttgcgtaaacaggattgtgaa
tcggactcggtgttttgtcgcgataagcgactttttctgggcagcatcaagtcggtgccc
ggcactccaacttcaacatggagagttttcaacgtcacggagcttctcgaacactggttg
aatcagggaacggaggcacccgagcaggtcccgacaccagcggacggagaagacactgga
agcggcgaagacttaacggtggacactggaagcgggggaggcttaattgaaccggttaca
aaaagtcggcgacgaaaaattcagcatcccacagcagaacgagttatgattgtagttttc
tacaaaaaccaattttcccacagtggccaacgtgcctccagcttaatcaatacagtggcg
cactccaaatatgtcatcctgaaccgggctccagacgccgctcaaggtcggcgccaaaaa
aggaaccgggtcgaaaggatgcgggttcagacggacgatagaaacgcgacaggaatagag
caacaacaagggatgctctgtcggcgagttgatatgtgggtggattttgatcaaattgga
tgggatgaatggatcgtgcacccgaagcgttataacgcataccgctgcgaaggcgaatgt
ccaagtccgctggacgagtctttcaacccaacaaaccacgcctatatgcagagcttgttg
aagctttaccatccggagcgcgttacctgtccgtcatgtgtgccgacgcgcctcagcccc
ctctccatgctgtactatgaaggcgacggtgtggtcatgcgccaccacgaggacatggtc
gtggaggaatgcggctgtcagtga
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