Ctenopharyngodon idella (grass carp): 127512974
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Entry
127512974 CDS
T08802
Name
(RefSeq) volume-regulated anion channel subunit LRRC8A
KO
K22038
volume-regulated anion channel
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cide04040
]
127512974
Ion channels [BR:
cide04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
127512974
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_14
LRR_1
LRR_5
LRR_At5g56370
LRR_LRWD1
Sp-CxC
LRR_6
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
127512974
NCBI-ProteinID:
XP_051750335
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Position
5:13308069..13315269
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AA seq
796 aa
AA seq
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MIPITELRYFVDTQPTYRILKPWWDVFTDYLSVVMLMIAVFGGTLQVTQDKMICLPCKWV
VNKTCRKYFNSTFSVPLTLEPQGIQYDLDRHQYNYVDAVCYENKLHWFAKYFPYLVLLHT
LIFLACSNFWFKFPWTSSKLEHFVSILLKCFDSPWTTRALSETVVEESDPKALVKMNGSF
DKKASYVSEDVEASVPMLSTTRSRIEQGIVDHSDTGVLDKKEGEQAKALFEKVKKFRIHV
EEGDIVYRLYIRQTIIKVVKFILIICYTGYYVHNIQFSVDCNVDIESLTGYRMYNCAHPL
ATLFKILACFYISLVIVYGMICVYTLSWMLRRSLKKYSFESIREESSYSDIPDVKNDFAF
MLHMIDQYDPLYSKRFAVFLSEVSENKLRQLNLNNEWTLEKLRQRITKNSQEKLELHLFM
LSGIPDTVFDLVELEVLKLELIPDVTIPPIIAQLTNLREMWLYHTPAKIEAPALAFLREN
LKSLHIKFTDIKEIPLWIYSLKNLSELHLTGNLSADNNRYIVIDGLRELKRLKVLRLKSN
LTKLPQVVTDVGMHLQKLSINNEGTKLMVLNSLKKMVNLSELELVRCDLERIPHSIFSLH
NLQEIDLKDNNLKTIEEIISFQHLHRLVCLKLWYNQIAYIPIQIGTLINLERLYLNRNKI
EKMPHQLFFCRKLRFLDLSHNNLTDIPSEIGTLQNLQYLAVTANRIEALPPELFQCKKLR
TLNLGNNCLQSLPSRFGELTSLTQLELRGNRLECLPVELGECRLLKRSGLIVEDNIFNTL
PSEVKEQLWRTDKEAS
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgatccccataactgagctgcgctactttgtggacacgcaacctacgtatcgcatccta
aagccatggtgggacgtgttcacagactatttatcggtcgtaatgctgatgattgcagta
tttgggggcacgcttcaggtcacacaggacaagatgatctgtctgccctgcaaatgggta
gttaacaagacatgtaggaagtatttcaattcaacgttttctgtgcccttgacccttgaa
cctcaaggaatccagtatgaccttgatcggcaccaatacaactatgtcgacgctgtgtgc
tatgaaaacaagcttcactggtttgctaagtatttcccatatttggtgctgctgcataca
ctcatctttctggcttgcagcaacttctggttcaagttcccttggacaagctctaaattg
gaacattttgtgtctatcctcctgaaatgttttgactcgccgtggaccacacgagctctg
tctgaaactgtcgtggaggaaagcgaccccaaagctctggtgaaaatgaatggctccttc
gataagaaggcttcatatgttagtgaagacgttgaagcgagtgttcccatgctgtccaca
accagatctcgtattgaacaaggaatcgtggaccactctgatactggtgtcctggataaa
aaggaaggtgaacaagctaaggcgttgtttgagaaggtgaagaagtttcgaattcatgtt
gaagaaggcgatatagtctaccgactctacatccgacagactatcatcaaagttgttaag
tttatccttattatctgctatacaggctactatgtacacaatattcagttcagcgtcgac
tgcaatgtggacatcgagagtctcactggttatcgcatgtacaactgtgcccatcccttg
gccactctcttcaagattttagcctgcttctacattagtctagttattgtgtatggcatg
atctgcgtatacaccctcagctggatgcttcgacgttccctcaagaagtactcgtttgag
tctatccgagaggagagcagctacagcgatattccagacgtgaaaaacgacttcgccttc
atgctgcatatgattgaccagtacgaccccctctattccaagcgatttgcggtgttcctc
tcagaggtcagtgagaacaaactgcgccagctgaaccttaacaacgaatggactttggaa
aagcttcgacagaggatcaccaaaaactcccaagagaagttggagctccacctgttcatg
ctcagtgggattccagacacagtctttgacttggtggagttggaggttctgaagcttgaa
ctcattcctgatgtcaccatcccaccaatcattgcccagcttactaacctcagagagatg
tggttgtaccacacgccagccaaaatagaggctccagcgcttgcatttctgagagagaac
ctgaaatctttgcacatcaagttcaccgacataaaggagattcctctgtggatctacagc
ttgaagaacttaagcgagttgcatcttactgggaaccttagtgctgataacaatcgctac
atcgtcatcgacggtttacgagagttgaagcgactaaaggttttgagactgaaaagtaac
ttaacaaagctgcctcaggtggtcacggatgttggaatgcacctccagaagctgtccatc
aacaatgaaggtaccaagttgatggtgctcaacagcttaaagaagatggtgaacctgtca
gagctggagcttgtccgctgcgatctggagcgcataccgcattccatcttcagcctgcac
aatttacaggagattgatctgaaggacaacaacctgaaaaccattgaggagatcattagt
tttcagcatcttcatcgacttgtttgtctaaagttgtggtataatcagattgcgtacata
cctatccagataggtactttgatcaacctggagcggctgtatttgaaccgtaacaagatc
gagaaaatgccacatcagctcttcttctgccggaagctgaggtttcttgatctgagccat
aacaatctcactgatatcccatcagaaataggaactctgcagaaccttcagtaccttgct
gtaactgccaataggattgaagcgctcccccctgagttgtttcagtgtaagaaactgcga
acgttgaacctcggaaacaactgcctgcagtctctaccctctcggtttggggagctcacc
agtctgacgcagctggagctgaggggcaaccggctcgagtgccttcctgtagaacttggg
gagtgcagattgctgaagaggagtggtctaattgtggaggacaatattttcaacacttta
ccttctgaggtcaaagagcagctgtggagaactgacaaagaggcttcctga
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