Ctenopharyngodon idella (grass carp): 127512982
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Entry
127512982 CDS
T08802
Name
(RefSeq) cyclic nucleotide gated channel subunit alpha 1a isoform X1
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
127512982
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cide04040
]
127512982
Ion channels [BR:
cide04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
127512982
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Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
GEMI5_RBS
BUD22
Folliculin
Motif
Other DBs
NCBI-GeneID:
127512982
NCBI-ProteinID:
XP_051750355
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Position
1:34161572..34164714
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AA seq
584 aa
AA seq
DB search
MSTSFFSRPKEVFVINPAGLLYYQWLLIITIPVMYNWTVIIARACFEELQHEYLLIWFLL
DYTSDLLYLADMAFRSRTGYLEQGLLIKDEKLLRQRYTSSLQFRIDVISMLPTDIFYFVL
GLDYPEIRINKLLRLNRMFEFFTISETMTNYPNIFRICTLVMYIIIIIHWNACLYFSFSK
LIGFGSDAWVYPALTEPEFGELMRKYSFSLYWSTLTLTTIGETPSPELDSEFLFHVVDFL
VGVLIFATIVGNIATMISNMNAAQAQFQARIDNIKQYMHARHVSKDLEKRVIKWFDYLWT
NKKAQDEREVLRYLPDKLRAELGMNVHLETLMKVRIFADCEAGLLIELVLKLRPVVFSPD
DYICRKGDIGREMYIIKEGKLAVVADDGITQFVVLGDGSYFGEISILNIKGSKAGNRRTA
NIKSIGYSDLFCLSKDDLMEALTEYPDAKAMLEEKGRQILLKDGLLELDPAKLKPDERDL
EDRVNRIYSTMQLMQTKVNKLLAEQEETQKNIKRRIAQIERLAGEVVEDEDEEEEKEKKE
ETQEEKKEEEPEKEKTEEDKEKTEEKEEEKIEEETEEKKKDEES
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacttcatttttttcaaggcccaaggaggtgtttgtgattaacccagcgggactc
ctgtattatcaatggctgcttataatcacaattcccgtcatgtacaattggacagttata
attgcaagagcctgctttgaggaactgcagcatgagtatctactgatatggttcctcctg
gactacacctccgatttgctttatttggctgacatggccttcagatcacgaacagggtac
ctggaacaaggcttgcttatcaaagatgaaaagctccttcgccagcggtacaccagcagt
ctccagttccgcatcgatgtcatctccatgctacccacggatatcttctacttcgtttta
gggttagactacccagagatccgcataaacaagttgctccgcctgaaccgcatgtttgag
ttcttcaccatctcagaaaccatgaccaactaccccaacatcttccgaatctgcactttg
gtcatgtacatcatcatcatcatccactggaacgcatgcctctacttctccttctccaag
ttaattgggttcggatcagatgcatgggtgtaccctgctctcaccgaaccagagttcgga
gagctgatgcgaaaatattccttcagcctctactggtctacgctcaccctcactactatc
ggagagacgccatctccggagctagactctgaattcctcttccacgtagttgacttcctg
gtgggcgtattgatctttgccaccattgtaggtaacattgctacaatgatctcaaatatg
aacgcagcccaggctcagttccaggccaggatcgacaacattaagcagtacatgcatgcg
cgacatgtcagcaaggaccttgagaagcgtgtcatcaagtggtttgactacctgtggact
aacaagaaggcacaagatgaaagagaggtgctgaggtacttgccagacaaattacgggca
gagttaggcatgaacgtgcatttagagaccctcatgaaggtgcggatctttgccgactgt
gaggcagggttgctgatcgagttagtgttgaagcttcgccctgtagtcttcagtcccgat
gactacatctgccgcaagggtgatatcgggcgggagatgtacatcataaaggaaggcaaa
cttgctgtggtggccgatgatggcatcactcagtttgtcgtccttggcgatggaagctac
tttggtgaaattagcattctaaacatcaagggcagcaaggctgggaaccgcaggacagca
aatattaaaagcatagggtactcagacctcttctgcttgtccaaagatgatctgatggaa
gctctgacggaatatcctgatgctaaagctatgctggaagagaaagggagacagattctg
ctgaaggatggtctgctggagctggaccctgcgaaactaaagccagacgagagagacttg
gaggaccgcgtaaaccgaatatacagcacaatgcagttgatgcagaccaaggtaaacaag
ctgctggcggaacaggaggagacacagaagaatatcaaacgtcgaattgctcagatagag
cgtctggctggggaagtggtggaggatgaagatgaagaggaggagaaggaaaagaaggaa
gaaacccaggaggagaagaaagaagaagagccagagaaagagaagacagaagaagacaag
gaaaagacggaagaaaaagaggaggaaaagatcgaagaagagaccgaagagaaaaagaaa
gatgaggagtcatag
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