KEGG   Ctenopharyngodon idella (grass carp): 127513030
Entry
127513030         CDS       T08802                                 
Name
(RefSeq) vesicle-associated membrane protein 8
  KO
K08512  vesicle-associated membrane protein 8
Organism
cide  Ctenopharyngodon idella (grass carp)
Pathway
cide04130  SNARE interactions in vesicular transport
cide04140  Autophagy - animal
cide04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:cide00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    127513030
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    127513030
   04140 Autophagy - animal
    127513030
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:cide04131]
    127513030
Membrane trafficking [BR:cide04131]
 SNARE
  VAMP, Ykt6, Sec22 (R)
   VAMP
    127513030
SSDB
Motif
Pfam: Synaptobrevin Baculo_F CD34_antigen Prominin LRRC37AB_C RIFIN SpoIIM DDB_G0292058_C ASFV_P17 ODV-E18 LMBR1 Orf78 Fzo_mitofusin Ferlin_C DUF6548 DUF1129 DUF3619 MCU DUF4212
Other DBs
NCBI-GeneID: 127513030
NCBI-ProteinID: XP_051750450
LinkDB
Position
5
AA seq 124 aa
MGVGDPNSTEPREGESSQEVDPVKSLQSQVDGVKEIMTQNVDRILARGERLDDLMDKSED
LEAGAQNFKHTSQKVARAYWWKNVKLIVLIVVIVLVIVLIIIFLATGVIPTSSPAPKPPT
VTPP
NT seq 375 nt   +upstreamnt  +downstreamnt
atgggggtgggtgatccaaatagtacggagccaagagaaggagagtcttcacaggaggtg
gatccagttaaatctctacagtctcaagtggatggtgtcaaggagattatgacccagaat
gtcgatcggatcctggcccgtggagaaagactggatgatctgatggacaaatccgaagac
ctggaagctggggcccagaacttcaagcacacctctcagaaggttgctcgcgcttactgg
tggaagaacgtgaagctgattgtgcttattgttgtgatagtccttgtcattgtactgatt
atcatattccttgccactggtgtgatcccaaccagttcacccgcacccaaacctcccacc
gtcacaccaccctag

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