Ctenopharyngodon idella (grass carp): 127513031
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Entry
127513031 CDS
T08802
Symbol
si:dkey-251i10.3
Name
(RefSeq) U3 small nucleolar RNA-associated protein 14 homolog A isoform X1
KO
K14567
U3 small nucleolar RNA-associated protein 14
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
127513031 (si:dkey-251i10.3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cide03009
]
127513031 (si:dkey-251i10.3)
Ribosome biogenesis [BR:
cide03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
127513031 (si:dkey-251i10.3)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp14
Motif
Other DBs
NCBI-GeneID:
127513031
NCBI-ProteinID:
XP_051750451
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Position
5:4294491..4316446
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AA seq
770 aa
AA seq
DB search
MATSSSLQKTTLSKGVKVTSALAADEEELPIEDEPAISASEDEEGSDDERKHNKLLEAIS
SMGGRKRKKQNERSEASLQVSEFFVNAEGTGEKVVLSDLLGTVEKTPGTSNKTKKQLRNL
EKSKETLELPLHKQETEKIQRCIAFEKTAEEVARWKTIVMKNQRAEQMVFPLIQEPLGAK
RVEQVVAGWKAQTPLEKEIFSLLHNNSQPVNDPILTPIEEASLKAMSLEEAKIRRAELQK
ARALQSYYEAKAKREKRIKSRKYHKIQKKARRKEFLKQFEEMVKTNPQAALEELKKLEMS
RMQERMSLKHQNKSKWAKAKAIMAKYDDSARKAMQEQLQINKDLTQKIVVLSDDEHESKG
EELETVPDFVNDPEPIIDSVNPWMKGQLTREEPEVSCITPEDAQTAEEENKEEELLGEFE
RKRRLRQADEEGLTPTEEKAEHASEVVGEDVVEIADNEENDDKEEEEEEEEEEVDVSEFN
TLFKLMRSEKTQEAQKDGEELLEEGPYRVRNMEDLEVLGEVFEPQAIVAPSLPQTSVVEA
TSEPTNKKNKEIDLNEVLTKEANVIKVPFLPTVVEEEHDEQISIIKEAFAGDDVISDFIK
DKRNEEAAGRPKEVDLTLPGWGEWGGVGLKPSRWKRNRFTVKMAPPPPRRDQKLPDVIIS
ENKRTPISYHQVSYVPFPFQNVAQFESCIRTPIGHTWNTHSVVKKMTKPNVVTTMGAIIE
PIVKEDFIKVNTTTPAATGPAILLGERRGEKRGAKHSSERNQRRSQKRKK
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggccacgtccagctctcttcagaaaacaacattaagtaaaggtgtgaaggtcacttcc
gctttggctgctgatgaagaggagcttcccattgaagatgaaccagccatcagtgccagt
gaagatgaggagggcagtgatgatgagagaaaacacaacaagctactggaagccatcagt
tctatgggtggaagaaagaggaaaaagcagaatgagcgttctgaagcgagtttgcaggtc
tccgagttctttgtcaatgcagagggtactggagagaaagttgtcctttctgacctcctg
ggaactgtggagaagaccccaggaacctccaacaagaccaagaaacagctgaggaaccta
gaaaagagtaaagagactttggagctccctctccacaaacaggaaacagagaagattcag
agatgcatagcatttgagaagaccgctgaagaggtggctcgctggaagaccatcgtaatg
aaaaaccagagggctgaacaaatggtgtttcctctgatccaggagcccttaggagctaaa
cgggtggagcaggttgtggctggatggaaggctcaaactcctcttgaaaaagagattttt
agcctcctgcacaacaacagccagccagtcaatgaccctattttgacccctatcgaggag
gcatcacttaaagccatgagcttggaggaggctaagattcgtcgtgctgagcttcaaaaa
gcaagagcgctccagtcatactatgaggcaaaagccaaaagagaaaagagaatcaagagt
agaaagtatcacaagattcagaaaaaagccagacgcaaggagtttctgaagcagtttgaa
gaaatggttaagacaaatcctcaagctgctttggaagagctaaaaaagttggaaatgtcc
aggatgcaggagaggatgtctctcaaacatcagaacaaaagcaagtgggccaaagctaag
gctatcatggcaaaatatgatgattcggcgcgtaaggcaatgcaggagcagttgcagata
aataaggatcttacacagaagattgtggtgctttctgatgatgaacatgaaagtaagggc
gaagaattggagaccgttcccgattttgtgaatgatcctgagccgatcattgactcggtc
aatccctggatgaaaggccaacttacacgtgaagagcctgaggtcagctgcatcacacct
gaggatgctcaaacagcagaagaggaaaacaaggaagaggaacttcttggagaatttgag
aggaagaggaggctgaggcaagctgatgaagagggcttgactcctacggaagaaaaagca
gaacacgcaagcgaggtggttggcgaagatgtggtggagattgctgacaatgaggagaat
gatgataaagaagaagaagaggaggaggaggaggaggaggtggatgtttctgagtttaac
acccttttcaagcttatgaggagtgagaagacacaggaagcgcaaaaagatggagaggaa
cttttggaggaaggaccatatcgagtcaggaatatggaagatctggaggttttgggtgag
gttttcgagccccaagccattgttgctccgtctctgccacaaacatctgttgtagaggca
acttcagagccaactaataaaaagaacaaggaaatcgacctcaacgaagtactcaccaaa
gaagccaatgtcatcaaagtcccctttttgccgacagtggttgaagaagagcatgatgaa
cagatttctatcatcaaggaggcttttgctggggatgatgtcatttctgatttcataaaa
gacaaaaggaacgaggaagctgcagggaggcctaaagaggtggacctgaccctgcccggc
tggggagagtggggaggtgttggtctcaaaccctcccgctggaaacgcaatagatttacg
gtgaaaatggccccaccgcctccaaggcgagaccagaaactgcctgatgtcatcatatca
gagaacaaacgcacaccaatcagttaccatcaggttagttacgttccattcccctttcaa
aacgtagcgcagtttgaatcttgcatccgtactcctattgggcatacgtggaacacacac
agcgttgtgaagaagatgacaaaacctaacgttgtcactacaatgggtgcgatcattgag
cctattgtcaaagaggacttcataaaggttaataccacaacaccagcggctacaggacca
gcaatcctgttgggagaacgcagaggggagaaaaggggcgcaaaacactcatcagaaaga
aatcaaagaagatcacagaagaggaaaaagtaa
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