Ctenopharyngodon idella (grass carp): 127513078
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Entry
127513078 CDS
T08802
Name
(RefSeq) E3 ubiquitin-protein ligase RNF43 isoform X1
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
127513078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cide04121
]
127513078
Enzymes [BR:
cide01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127513078
Ubiquitin system [BR:
cide04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127513078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4
zf-C3HC4_2
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
zf-RING_Vps41
FANCL_C
zf-ANAPC11
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
127513078
NCBI-ProteinID:
XP_051750562
LinkDB
All DBs
Position
5:complement(43717894..43845126)
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AA seq
843 aa
AA seq
DB search
MRVPVRRLAGLWPWLLMAALQVALGHTGLELAAAVESERATIKVTLLKQEPTSRTITLEG
VFSWGSAGSAKGKLMQSHPLSLCNTSEDERPETDFITIVKLESPESKVPQCQPLLDKARL
AIQRGAQAVIFDISDDPAAAAAALQDSGSLTRPVVLVKSSDAEELMGLVNKNEEAMVFID
IRVEPKWPPYDVGILLTVALAVLAIIMIFALRFRCRSNRTWDSVHQETMRAISRLETRMY
SSQGCSGSQRSRGAPASNSSSNSSPICAICLEEFMDGQDLRIISCGHEFHKECVDPWLLQ
HRTCPLCMHNIMGKKPQGSDLASRQPQRNRLPPAPQEHSQAFLLPQHYPNQHPYPQHQVP
FSLRHHYPRTPGPLPQQGHFGNSPPLHPRTLRCLTSRPLGASCAYHLAPDSHHGRTHRTG
GHGCRTGGHHYAPPRRSCHRCPVGALRNASGSCVHHLASPANHATHHLPRGGGSHGRQDN
SSCSVGSYHTERSGYLADGPASDSSSGSCHGSSSDSVLNCTDISLQGVYGSWSTFRSSLS
SDYDPFVYYGPGKAPRRGSMEATQRPRSLDSVVNHAGDAGAVCSEEQQQQQQVAVFSHVH
YHRHRHHYYEDGELNQGPGQGSDEDQGATSSAMAAGGPCNATKNKDSTGCQVQHQSCHCP
KTDLSSRRVEDRAPDPVSSSGASVILPSPTLTSPSPSCCHKGPGWTTRQKAAGCPLEAPS
PVVHFHQSLDLQDDCSIHIHYGQGAGSYCCTPPPDLAPTLLPVPLILDSTGMADWPCCSG
AHVVWQKQVQQAHSEPQLLGPTSGMDRPLCRAHHGPGDELSTDICLYCQALHNSQGSEEE
SGV
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgagggttcctgtgcggcgattggccgggctctggccgtggctgctcatggctgccttg
caggtagcgttgggccacacgggcctggaactagccgctgctgtggagtccgaacgagcc
acgatcaaggtgacactgctgaagcaggagcccaccagcaggaccatcaccctggaaggg
gtgttctcctggggcagcgcgggcagtgctaaagggaaactcatgcagtctcacccgttg
tctctgtgtaacaccagtgaagatgagcgtccggaaaccgatttcatcaccatcgtcaaa
ctcgagagcccagagagcaaagtgcctcagtgccaaccgctgctggataaagctcgtctg
gcgattcagagaggagctcaggctgtcatctttgacatctcagatgatccagctgctgct
gctgctgcgctgcaggactctggttcgttgactcgtccggttgtgctggtgaagtcatca
gacgctgaagaactgatgggactcgtcaacaagaacgaagaagccatggtgttcattgac
atcagggtggagccaaaatggcctccctatgacgttggcatcctgttgaccgtggctctg
gcggtgttggccatcatcatgatctttgctctacgcttccgctgcaggtccaacagaacc
tgggactctgtgcaccaggagaccatgcgtgccatcagcaggttggagacgcgcatgtac
agctctcagggttgctctggatcccagcgttctcgcggagctccagcgtcaaacagcagc
tccaattccagcccgatctgtgccatctgtctcgaggaattcatggatggccaggacttg
agaatcatctcctgtggtcatgagtttcataaggagtgtgtcgacccctggctcctacaa
caccgtacctgccctctgtgcatgcacaacatcatgggtaaaaagcctcagggttcagat
ctggcgtcccgtcagccccaaaggaatcgactgccgcccgctccacaagagcacagtcag
gccttcctccttccccaacactatccaaaccaacacccttacccccagcaccaagtcccc
ttttccctgcggcatcactacccccgcacccctggacctttaccccaacagggtcacttt
ggaaactctccccctcttcatccacgcactctgcgttgcttaaccagcagaccattgggt
gctagctgcgcataccacctggccccggattcccatcacggacgtacgcacagaacaggc
gggcacgggtgtcggactggtgggcatcactatgcaccccccagaaggtcgtgtcaccgg
tgccctgtaggagctttacggaacgcttcgggttcttgtgtgcatcatttggcatcgcca
gcaaaccacgcaactcatcacctgccgcgtggcggaggctcgcatggccgccaagacaac
agcagctgctccgttgggagttaccacacggagcgcagcggttaccttgctgacgggcca
gcaagcgactccagctcgggatcgtgccacggctcgtccagcgattccgtattgaactgt
acagacatcagcctgcagggcgtctatggcagctggtccacttttcgtagctcactcagt
agtgactatgacccgtttgtctattatggaccgggcaaagccccacgcagagggagcatg
gaggccacgcagaggcctcgttccctggactcggtagtgaaccatgccggtgacgctggt
gcagtttgctcggaagagcagcagcagcagcagcaggtggccgtgttcagtcacgtacac
tatcacaggcatagacaccactattacgaggacggggaactcaatcaagggcccggccaa
ggctctgatgaggatcagggggccacgtcctcggccatggcagcaggtggcccctgtaat
gcaactaaaaacaaagactccactgggtgtcaggtacagcaccagtcttgccactgcccc
aaaacggacctcagttcaaggagggttgaggatagagccccggaccctgtttcttcctca
ggtgcctctgtgatccttccctcccctactttaacctctccgtccccatcctgttgccac
aaaggcccagggtggaccaccagacagaaagcagccggctgtcccttggaagcaccttcg
ccggttgttcacttccatcaaagcttggaccttcaggatgattgtagcattcatatccac
tacggacagggagcgggaagctactgctgcacacctccaccagatttggcccccacgctg
ctgccggtgcccctgatcttggactcgacgggtatggccgactggccatgctgtagcggg
gcacatgtggtgtggcagaagcaggtgcaacaggcccattcggagcctcagcttctaggg
cctacttctggaatggacagacccctgtgtagggcccatcacggcccaggggatgaactt
tccacggacatctgtctgtattgccaagctctacacaatagtcaggggtcggaggaagag
tctggtgtttga
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