Ctenopharyngodon idella (grass carp): 127513087
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Entry
127513087 CDS
T08802
Symbol
si:ch211-283g2.1
Name
(RefSeq) sodium- and chloride-dependent GABA transporter ine isoform X1
KO
K05039
solute carrier family 6 (neurotransmitter transporter, taurine) member 6
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cide02000
]
127513087 (si:ch211-283g2.1)
Transporters [BR:
cide02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
127513087 (si:ch211-283g2.1)
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
127513087
NCBI-ProteinID:
XP_051750589
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Position
5:complement(44289312..44303343)
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AA seq
578 aa
AA seq
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MAVEEEAGRPTWSRQIEFTLAGIGCAVGLGNIWRFPYLCYRSGGGAFLVPYLLMLVVLGI
PLLHMELTLGQYLRRGPVLALTKACPLLKGVGTATVAISFIMCTYYNIIITWALYYMFSS
FRSELLWENCNNTWNTANCTDRVTNSSSTSTASQQFFNFKVLERTSGVEETGTLRWELFL
LLMLAWILVYLCIFKGVKSTGKVVYFTALFPYLILLALLINNVQLPGAIDGIRFFIIPEW
DKLLNVEVWINAASQIFNSIGIGFGSLMAMASYNNYNNNVLKDTLAISITNSLTSIFAGF
VIFSAFGYMSHLQNVPVSEIAVDGPGLVFVVYPQAFVTMPVAPLWAFLFFFMLLCLGLDS
QFAMVEVMVTSLLDSYSKPILKHLKCKEFFVLVVCCAAFLLGIPNVMQVGIYVFQLMDHY
TAIVSIMFLAFFEVVGVCWIYGVNRLSSNLIEMTGKRPNIFFRICWWVICPVLITVILVF
SVIQFKPARYENYIYPPWAQAVGWLIALASIIWIPLAAVHTLWVLPGSFVQKLKKSITPF
SLDEDSKIPYYQQKGAIMEVIPNIAIISSDKPPIQTNL
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggaagaggaggctggcagacccacatggagcaggcagattgagttcaccctg
gctgggatcgggtgcgctgtgggactggggaacatctggaggttcccgtacctgtgctac
aggagcggtggaggagcgttcctggtgccgtacctgctcatgctggtggttctggggatc
ccgctgctgcacatggagctgacgctgggccagtacctgaggagggggcccgtcctggcc
ctgaccaaagcctgtcctctgctgaaaggtgttggcacggcaacagtggccatctctttc
atcatgtgcacatactataatataattatcacatgggcgctgtactacatgttcagctca
tttcgaagcgagctgctctgggaaaactgcaacaacacatggaacacggccaactgcacc
gaccgtgtgaccaacagctcctcgacctccaccgccagccagcagttcttcaattttaag
gtgctggagaggaccagtggagtggaggagacgggcaccttgagatgggagctcttcctc
ctgctgatgctggcctggatcctcgtctacctctgcatcttcaaaggggtcaaatccact
gggaaggttgtgtacttcaccgctctgtttccatacttgattcttctggctctgctgatc
aataatgtgcagcttccgggagccatagacggcatccgattcttcatcatacccgagtgg
gacaagctccttaatgtggaggtatggattaatgcagcatctcaaatctttaactccatt
gggatcggcttcggctcgctgatggcgatggccagctacaacaactacaacaacaacgtc
ctcaaagacactctggccatttccatcacaaattccttgactagtattttcgctggattt
gtcattttttctgcatttggctacatgtcgcaccttcagaatgtgccagtcagtgaaatt
gcagtggacggtccaggtctggtgttcgtggtttacccacaagcctttgtgacgatgccc
gttgctcctctgtgggcctttctcttctttttcatgttactctgcctcggactcgacagt
cagtttgccatggtggaggtgatggtgaccagtctgctggacagttacagtaaacccata
ctgaagcacctcaaatgcaaggagttttttgtgctcgtagtctgctgtgcggcgttcctt
ctgggcatccctaatgtcatgcaggtggggatctatgtgttccagctgatggatcattac
actgctatcgtgtccatcatgttcctggcattttttgaggtggttggtgtttgttggatc
tatggtgtaaaccgtctgtccagtaatttaatagagatgacgggaaaaagacccaacatt
ttcttcaggatctgctggtgggtcatttgtcctgttttgataactgttatcctggtgttc
tcagtgattcagtttaaaccagctcgttatgagaattacatctatccaccgtgggctcag
gctgtcggctggctcatcgctttggcgtccatcatctggattcctctagcagctgtgcac
acgctctgggttctgcccggatcctttgttcagaaattaaaaaagtccatcacaccattt
tctctggatgaggactccaagatcccgtattaccagcagaaaggagccattatggaggtg
atacccaacatcgccatcatcagctctgataaaccaccaatccagactaatttatga
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