Ctenopharyngodon idella (grass carp): 127513117
Help
Entry
127513117 CDS
T08802
Name
(RefSeq) LOW QUALITY PROTEIN: VPS10 domain-containing receptor SorCS3
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cide04131
]
127513117
Membrane trafficking [BR:
cide04131
]
Endocytosis
Others
Others
127513117
Endosome - Lysosome transport
127513117
Endosome - Golgi transport
127513117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
127513117
NCBI-ProteinID:
XP_051750688
LinkDB
All DBs
Position
1:complement(36319629..36574364)
Genome browser
AA seq
1243 aa
AA seq
DB search
METGLGVFPGAHFTLSTWLILSSVYVFPNAKADISCAPCMSPMQVNYAGDEHLRDPPESG
KYPRQDQKKPKLITVLYPNIGVPTGREADGFPGIAPKLERNAEGINSRAPLGNFAESALD
EELFSDEYVESVSELEPEDAASERVKRSVPEFLESARSVDARSEEQRKTSGLRVDGQSKR
AEVRWNRDDDQDGRVSDSRPDEPKLASSTFALAGDSAHNHAVVYWSGKNSSVILILTKLY
DFHLGSVTESTLWRSTDYGSTYERLNDKVGVKTVLSYLYVCPTNKRKIMVLTDPEFESSV
LISSDEGASYQKYRLSFFVLSLLFHHTQEDWALAYSHDQKLYSSFDFGRKWQLVHERVTP
NRFYWSVSGLDKELDLVHMEAHTPDGHCQYVTCRAQACSESSRTYPFSGYIETNSLVVQD
EYVFVQVTTTGRASYYVSYQRETFVRIKIPKYSLPKDMHIVSTDQGQVFTAVQEWNQNDT
YNLYISDTRGVYFTLALENVRTSRGLGGNSMIDLYEVAGIEGMLIANRKVENQVKTYITY
NKGRDWRLLQAPATDLAGNTIHCVLPFCSLHLQLQMSENPYLSGSISTKSSAPGVIVAYR
XMENLSGNIGSELSYNNVAMFISSDAGNNWRQIFEEEHNVWFLDKGGALVAVKQPTVPTR
HLWISFDEGRQWTRHSFSAMPLFVDGVLVEAGAENQIMTFFGHFSHRSEWQLIKIDYKSI
FTRRCTEGDYQTWHLHNQGEPCIMGQKQIYMKRRPGNYCMVGWDNSRILSAEPCICRAHD
FECDYGFERRGDGNCLPAFWFNPSTVSRSCSQGQNYLNSTGYRKVVANNCTKGVKEMYTA
RKQQCPNRPPRGLVLTTRDDKLTANLGNNVTFLVRLEEGDSMRTNIQLDFGDGTAVSYSN
LSWTQEGIRHVYRSAGIFRVTALAENSLGFDTSSLYLHVTCPVEHIQLLAPYVVIKNKEV
NLTAVVWPSHFRTLTYFWWLGNNTEPIITLDSSISHTFSTEGMITVTVQVSSADSILQDT
RTIAIQEFFKSLLLSFSPNLDEANPDIPEWRQDVGRVIKKAVLQVADIPEDQLLVAVFPG
IPTAAELFLLPPRNQSDGRKRTEEDLEQISEILVNALNQISVEFELKPGSRVIVYITQLT
LAPLVDSIPRHSSSAMLMLLSVVFLGLAVFLIYKFKRKIPWINIYAEVNHEKEQEMINTV
GQNDATPKITLSELMEKELEARAKRGVINTCESTREIPNCTSV
NT seq
3732 nt
NT seq
+upstream
nt +downstream
nt
atggagaccggtctgggtgtattccctggcgctcactttactctttctacctggcttatt
ctttcctccgtgtatgtttttccaaacgcaaaggcagatataagttgcgcgccatgtatg
tcgccaatgcaagtgaattacgcaggggatgagcatctgcgtgacccgcctgaatctggg
aaatatccgagacaggatcaaaagaaacccaagctgatcacagttctttacccgaatatt
ggagtacccactggacgagaggcggatggttttccagggattgcgccgaaactggaaaga
aacgctgaggggataaactcccgtgcgcctttggggaacttcgccgagtccgctttagat
gaagaattgttttcggatgaatatgtggaaagtgtatccgaattggaacccgaggacgcc
gcgtcagagagagtcaaaagaagcgtgcccgagtttctggagagcgcgcggagcgttgat
gcccgctcggaagagcagagaaagacctcaggtctgcgggtggacggacagagtaaacgc
gccgaagttcgctggaacagggatgatgaccaggatggcagagtatcggattccagacca
gacgaacccaaactggccagcagcacttttgctctggctggagactccgcgcacaaccac
gcagtcgtgtactggtctggaaaaaacagcagtgtgattctgattctcaccaagctgtat
gactttcaccttggcagtgtaacagaaagcactctatggagatcaactgattatggcagc
acttatgagagactgaatgataaagtgggagtcaagaccgttttgagttacctctatgtc
tgccccaccaacaagagaaagataatggtgctgaccgacccagagtttgaaagcagtgtt
ctcatcagctcagatgagggtgccagttatcagaaataccgcttgagcttcttcgtctta
agtctgcttttccatcacacacaagaggactgggcattagcctacagccatgaccagaag
ctgtatagctcatttgactttggccgaaagtggcagctagttcatgagcgagtgactccg
aaccgcttctactggtcagtatccggcctggacaaggaattagatctagtgcacatggag
gcccacactcctgatggccattgtcagtatgtgacatgcagagctcaagcctgctctgaa
tccagtaggacatatccattttctggctatattgagaccaactcactcgtggttcaggat
gaatacgtgttcgttcaggtaacgaccactggcagagcgagctactatgtgtcctatcaa
agagaaacttttgtacgcattaaaatccccaaatactctctgcccaaggacatgcatatt
gtgagcacagatcaaggtcaggttttcaccgccgtccaggagtggaaccagaacgatacc
tacaacctgtacatatctgatacgcgtggggtgtacttcaccttggccctggaaaacgtc
aggaccagccgtggcctcggaggcaacagcatgatcgacctttacgaggtagcggggatt
gaaggtatgctcattgctaataggaaggtggagaaccaggtgaagacatacattacttac
aacaagggccgcgactggaggcttttgcaggcgcctgctactgacctggcaggaaatacg
attcattgtgtgctgccgttttgctcgctgcacctacaactgcagatgtcagagaacccg
tacctctcaggctccatctccaccaagagctctgcaccgggagtcatcgtggcctacagg
taaatggaaaacctgagcggaaatattggctccgaactgtcttacaataatgtggctatg
ttcatttcatcagatgcaggcaataactggagacagatttttgaggaagaacacaacgtg
tggtttttggacaaaggtggagctttggttgccgtgaagcagcccactgtgcccactaga
catctttggatcagtttcgatgaaggtcgtcagtggacgcgtcacagtttctcagccatg
ccgctgttcgtggatggtgttttggtggaggcaggtgcagaaaatcagatcatgacgttt
tttggacacttcagccatcggtctgaatggcagcttatcaaaattgactacaagtccata
tttaccagaaggtgcacagagggagactaccaaacctggcacctgcataaccagggtgag
ccatgcataatgggtcaaaagcagatctacatgaaacgtcgtcctgggaactactgcatg
gtgggatgggacaactccaggatcctttccgcagaaccctgcatctgcagagcacatgac
tttgagtgtgattatggctttgagagaagaggggatggaaactgcctgccagcattttgg
ttcaacccttccactgtgtctcgaagctgcagccaagggcaaaactacctcaacagcaca
gggtatcgtaaagtagtagcgaataactgcacgaaaggagtgaaggagatgtacacggcc
aggaaacagcagtgtccgaaccgccccccacgaggtttagtgctgacaacccgtgatgac
aaactcacagccaacttgggcaacaatgtgaccttcctggtgcggctggaggagggcgac
tccatgaggacaaacattcagctggacttcggggatggtacggcggtgtcctactccaac
ctgagctggacgcaggagggcatcaggcacgtgtaccgcagtgctggtattttcagagta
acagcgctggcggagaacagccttgggttcgacacctcatccctctacctgcatgtgacg
tgccctgtggagcatattcagctgctggctccatatgtggtcattaagaataaggaggtg
aacctgacggcagtggtctggccttctcatttcagaacgctcacctatttctggtggctg
gggaacaacacggagccaataattacattggacagcagtatttcccacacgttcagcacc
gagggcatgatcaccgtgactgttcaggtctcctcagcggactcgatactacaggacacc
agaactattgccatacaagaattcttcaaatcacttcttttatctttctctcctaatctg
gacgaggccaaccccgacatcccagagtggagacaggatgtgggtcgggtaattaagaag
gctgttctccaggtcgctgacattccagaagaccagctgctggtggccgtgtttcctggc
attccgactgctgcggaactcttcctgcttcctcctaggaaccaatcggatggcaggaaa
cggacagaggaagatctggagcagatatcagaaatcctggttaatgcattgaatcagatc
tcagtggagttcgagttgaaacctggctcccgggtcatcgtttacatcacgcagttaact
ttagctcctctggttgactccatcccaagacacagcagttctgctatgctgatgcttctg
tcggtggtgtttttgggtttagctgtatttctcatctacaaatttaagagaaaaatcccc
tggattaacatctacgcagaggtgaaccatgagaaagagcaggagatgatcaatacggtg
ggccagaatgacgccacacccaaaatcaccctgagtgagttgatggagaaagaactggag
gcccgtgccaaacgtggagtgatcaacacctgtgaaagcacaagggagatccccaactgc
acgagtgtctga
DBGET
integrated database retrieval system
