Ctenopharyngodon idella (grass carp): 127513130
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Entry
127513130 CDS
T08802
Name
(RefSeq) hedgehog-interacting protein
KO
K06231
hedgehog interacting protein
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
127513130
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Gene cluster
GFIT
Motif
Pfam:
GSDH
EGF_2
hEGF
JAG1-like_EGF2
Motif
Other DBs
NCBI-GeneID:
127513130
NCBI-ProteinID:
XP_051750692
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Position
1:30022276..30063264
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AA seq
694 aa
AA seq
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MKHLQFVLLLAIAANFWECGDAKFGEKGELSPRRRRCYDGSLPKRLKKKERKLSLEGSGG
GEVCHRLYPRVSCCPSRRAPYQILHRRDARIFSTNNTECSRLLEEIKCAHCSPHAQMLFH
SPKLEKAPHREQDLPRLCHDYCQEFYYTCRGHVPELFQADVDEFCQYYGRKDGGLCFPDF
HRKQLRRDSNYLLDEKIEVINRKHKHNCYCAQEILSGLRQPVGVVHCGDGSQRLFILEKE
GFVRILTHNMELLKEPFLDIHKLVQSGMKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQE
RWAIGPHDHILRVVEYTVSRKNPNQVDTRTTRVLMEVAELHRKHLGGQLLFGPDGLLHII
LGDGMITLDDMEEMDGLSDFTGSLLRVDVDTDSCSTPYSIPRNNPYFNSTNQPPEIFAHG
LHDPGRCAVDKLRMDTNGSLLILCTDTVGKNTTRGRILQVIKGKDYENEPSMFDLGSNGG
ATPVGGFIYRGCQSRRLYGSYVFGDKNGNFRILQRPSEDRSWQEKPLCLGTSSSCGSSLV
GHILGFGEDELGEVYILASSKSTVLQSHSGKLYKLVDPKRPQVPKECRRPVEDPEMLSTA
CSRECKNGHCTPTGKCCCSAGWEGPFCLRAKCEPACRNGGVCVEPNKCLCKEGFSGNQCE
KGERGTRGDGEKDSILEHIIDMTSYLLDLTSYIV
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgaagcatttgcaatttgtgctcttgttggccatcgcggccaatttttgggaatgtggt
gatgcgaaattcggcgagaaaggagaattaagtccaaggaggaggagatgttacgatgga
agtctgccgaaacgcctgaagaagaaggagagaaaactgtcactggagggaagcggtgga
ggggaggtttgtcacaggctctatcctcgcgtgtcctgctgtccgtccaggagggctccg
tatcaaatactccatcggagagatgctcggatcttctcgaccaataacacagagtgttct
agacttctggaggagattaagtgtgcccattgctcaccacatgcccagatgctcttccac
tcacccaaacttgaaaaagcaccacacagagaacaagacctaccccgcttatgccacgac
tactgccaagagttctactacacctgccgtggacacgtaccagaactgttccaagccgac
gtggatgagttctgccagtactatggaaggaaggacggagggctgtgctttccagatttt
caccgaaagcagttgcgacgagattccaactacctgttagatgaaaaaatagaagtgatt
aacagaaaacataaacacaactgctactgcgctcaggagatccttagtggtcttcgacag
cctgttggtgtggtgcattgtggggatggatcacagcggctttttattttggagaaggaa
ggctttgtacgaatcctaacacacaacatggagctcctaaaagagccttttctggacatt
cataagctggtccaaagcggtatgaagggaggagatgaaaggggcttgctaagccttgca
ttccaccccaattataagaaaaatggaaagctctacgtctcctacacgaccaaccaggag
cgctgggctatcggaccacacgaccacattcttcgtgtagtcgagtacacggtgtccagg
aaaaatccgaaccaggtggatacaaggactactcgggtgttaatggaagtagctgagctc
caccgaaagcatctgggagggcagcttctctttgggcctgatgggcttctgcacatcatt
ttaggtgatggcatgatcaccttggacgatatggaggagatggatggtctgagtgatttc
acaggatctctccttcgggtagatgtggacacagatagttgtagtacgccctactctata
cccagaaacaacccctatttcaacagcacaaatcagccccctgaaatctttgcccatgga
ctgcatgacccaggaaggtgtgcagtggataagctccgcatggacaccaatgggagtctg
ctgatcctgtgcacagatactgttggcaaaaatacgacaagaggcaggatcctacaggtc
atcaaaggaaaagactacgaaaatgaaccatctatgtttgacttggggtcaaacggaggt
gcaaccccagtcggtggttttatctacaggggatgtcagtcaagaagactttatggaagt
tatgtatttggagacaaaaatgggaacttcagaattctccagaggccttcagaagacaga
tcgtggcaagagaagcctctttgtcttggtactagcagttcctgcggttcctcgctggta
ggccacatcctggggtttggcgaagatgaattaggtgaggtctacatcctcgcctccagc
aaaagcacggtgttacagtcgcacagcggaaaactctacaagttggtggaccccaaaagg
ccacaggtccctaaggagtgcagacggccggtggaggatccagagatgctaagcaccgct
tgctcccgtgaatgcaagaacggccactgtacacccactggcaaatgctgctgcagtgct
ggctgggagggccccttctgcttacgagccaaatgcgaacccgcctgtcgcaacggtggg
gtctgcgtggagcccaacaagtgtctctgcaaggaaggattctccggcaaccagtgcgag
aaaggagagcgaggaacacgaggggacggtgagaaagacagcatcctggagcacatcatt
gacatgacgtcttacctgctggacctcaccagttatattgtataa
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