Ctenopharyngodon idella (grass carp): 127513161
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Entry
127513161 CDS
T08802
Name
(RefSeq) WD repeat-containing protein 36
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
127513161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cide03009
]
127513161
Ribosome biogenesis [BR:
cide03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
127513161
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
EIF3I
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_VPS8
NBCH_WD40
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_SCAP
Beta-prop_HPS5
Utp12
Cytochrom_D1
Beta-prop_LRRK2
SGL
Motif
Other DBs
NCBI-GeneID:
127513161
NCBI-ProteinID:
XP_051750712
LinkDB
All DBs
Position
5:9432862..9464705
Genome browser
AA seq
895 aa
AA seq
DB search
MISMSTGKKGSVIFSGFRALGLYSNHLAHVLRFHKKHREFYVITAVGQCFHTYNVKKLGI
VAVSNALPEDISSLAADRMLVYAAYGKLVSAFAKNKEVVHTYTGHQADVHLLLPFGDHFI
SVDKDNVVIIWDVESEDTYLQISYDKASFEVSALMHPSTYLNKILFGSSQGSLQLWNIKS
NKLLFTFPGWATAVTVLQQTPAVDVVGVGLASGQIIIHNIRFDETLMKFQQDWGPVTALS
FRTDGHPIMASGSPIGHIGLWDLEEKKLVSQMRDAHTTAIAGLTFLQNEPLLITNGADNA
IRVWIFDVAGGDGRLLRHRMGHSAPPAKIQHHDQSGLHILSAGQDGTLQSFSTVHERFNK
SLGHGTLNKTKAKKKGVRNDTEKLPAITTFASETARQSDWDGIIACHRGFLMTTTWNYQK
GSMGAHRLEPERFNRNRSLNVHATAVDITSCGNFAVIALSSGHIDVYNMQSGFHRGHYGE
DKAHAGPVRGVAVDALNQLTVSVGADRLLKIWKFKSKEELHTHSLPAAPASSQLHRDSGM
LAIALDDFSVHILDMETRRIVRRFSGHRGQINDMTFSPDGRWLITASMDCAIRTWDLPSG
SLVDCFLVDAAAVSLSMSPTGNFLASSHVDGLGVYLWSNNTLCSMVSLRPLPADYEPTVI
MLPGTCPSKETEEEEVLDVDSEMAEYISPAQLDEHLVTLSLLPDSRWKNLLHLDIIKKKN
KPKEPPKLPKAAPFFIPTIPGLVPQFALPNTPSEDQSKVVNLGVLAQKSTFYVQLENALD
SNSYEEPVKLLRELGPSAIETELRALSPDMGGDVRVMQSFLKMISSILQTKRDFDLAQAY
LALFLKLHLRFIADQPELLKEAESVSANLEEMWMSMQTLLNQNICLLSYIKSALL
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
atgatcagtatgtctacgggaaagaaaggaagcgtaatcttctctggattcagggcgctg
gggctttactctaaccatctggcgcacgtgcttcgcttccataagaaacacagagagttc
tatgtgatcactgcagtcggacagtgtttccacacatataatgtaaagaaacttggaatt
gttgcagtcagtaatgctctcccagaagacatttcatccctagcggcggaccgtatgctt
gtctatgctgcatatggaaaacttgtctcagcttttgcaaaaaacaaagaggttgttcac
acatacacaggccatcaagctgatgtgcacttactgttgccttttggagatcatttcatt
tctgttgacaaggacaatgttgtcattatttgggatgtcgagtctgaagacacatacctg
cagatttcatacgacaaagcatcatttgaagtctctgctttgatgcacccgagcacctac
ctgaacaaaatcctgtttggaagcagtcaagggagtcttcagttatggaacatcaaatca
aacaaactcctattcacatttcctggatgggcaactgctgtaactgttcttcaacagact
ccagctgtggatgttgtgggtgtgggtttagcatctggtcagatcatcattcacaatatc
agatttgatgaaacactgatgaagttccaacaagactggggtccagtcacagctttatcc
ttcaggacagatgggcatccaataatggcatctggcagtcctatcggacacatagggctg
tgggatttagaggagaagaaactagtcagtcaaatgcgagatgctcatacaacagccatc
gctggcctcacatttcttcaaaatgaacccctcctgatcaccaatggagcggacaatgcc
atacgggtgtggatttttgacgttgccggaggggacggccgtcttctaagacatcggatg
ggtcacagtgctccaccagcaaagattcagcaccatgaccagagcggcttgcacattctt
agtgcaggtcaagatggtactttgcagtcattttcaaccgttcatgaaaggttcaacaag
agtttggggcacggcacccttaacaaaacaaaagctaaaaagaaaggtgtgaggaacgac
acggaaaaacttccagccatcacaacttttgcctcagaaacggctcgtcagagtgactgg
gatggcattattgcatgccaccgcggtttccttatgactacgacatggaactatcagaaa
ggttcaatgggtgctcacaggttggagcctgaacgctttaacaggaaccgcagcctcaat
gtccatgcaaccgctgtggatatcacctcctgcgggaactttgcagtgattgcgctgtct
tcaggacacattgatgtgtacaacatgcagtctggttttcaccgaggacattatggagag
gacaaggcgcatgcagggcctgtgcgtggggtcgctgtggatgctctaaaccagttgact
gttagtgtgggagcagatcgccttctgaaaatctggaagttcaaatccaaggaggagtta
catacacacagcctgccagccgccccagcttcatctcagcttcacagggacagtgggatg
cttgctatcgctctggatgatttttctgttcacattctggatatggagaccaggaggatt
gttcgtagattctctggacatcgtgggcagatcaatgacatgacatttagtccagatgga
cgttggctgattacagcatctatggactgcgccatcagaacatgggatcttccatctggc
agtttggtcgactgtttcctggtagatgcggcagccgtcagtctcagtatgtcccctacc
gggaacttcctggcctcatcgcacgttgacggtctaggtgtttatttatggtccaataac
acactgtgcagtatggtgtcattgcgccctctacctgcagactatgagccgactgtgatc
atgctgccaggcacctgcccgagtaaagaaacagaagaagaggaagttttagatgttgac
tctgagatggctgagtacatttcaccagcacagctggatgaacatctggtcacactctca
ctgcttcctgactctcgctggaagaacctgctgcatcttgacatcatcaagaaaaagaac
aaacccaaagagcctccaaaattacccaaagcggcacccttcttcattcccaccattcca
gggctggtgccccagtttgctctacccaacacaccctcagaggaccagtctaaagttgtc
aacttgggagtgttggcacagaagtccaccttttacgttcagcttgagaatgctttagac
agcaactcatatgaggagccagtgaagctgctgagagagttgggcccctctgccattgaa
acagagcttcgggcactgtctccagatatgggtggagatgtcagagttatgcagagcttc
ctcaagatgatcagcagcattcttcagaccaaaagagattttgacctggctcaagcctac
cttgcattgttcctcaagctccatcttcggttcatcgcagaccagcccgaactattgaag
gaggcagagagcgtgtctgcgaacctggaggagatgtggatgtccatgcagacgctctta
aaccagaacatttgtctgttgtcttatatcaagagtgcgttattataa
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