KEGG   Ctenopharyngodon idella (grass carp): 127513161
Entry
127513161         CDS       T08802                                 
Name
(RefSeq) WD repeat-containing protein 36
  KO
K14554  U3 small nucleolar RNA-associated protein 21
Organism
cide  Ctenopharyngodon idella (grass carp)
Pathway
cide03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:cide00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    127513161
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:cide03009]
    127513161
Ribosome biogenesis [BR:cide03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    127513161
SSDB
Motif
Pfam: Utp21 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WD40 Beta-prop_TEP1_2nd WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd EIF3I ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_DCAF4 Beta-prop_VPS8 NBCH_WD40 WD40_RFWD3 Beta-prop_Vps41 Beta-prop_SCAP Beta-prop_HPS5 Utp12 Cytochrom_D1 Beta-prop_LRRK2 SGL
Other DBs
NCBI-GeneID: 127513161
NCBI-ProteinID: XP_051750712
LinkDB
Position
5:9432862..9464705
AA seq 895 aa
MISMSTGKKGSVIFSGFRALGLYSNHLAHVLRFHKKHREFYVITAVGQCFHTYNVKKLGI
VAVSNALPEDISSLAADRMLVYAAYGKLVSAFAKNKEVVHTYTGHQADVHLLLPFGDHFI
SVDKDNVVIIWDVESEDTYLQISYDKASFEVSALMHPSTYLNKILFGSSQGSLQLWNIKS
NKLLFTFPGWATAVTVLQQTPAVDVVGVGLASGQIIIHNIRFDETLMKFQQDWGPVTALS
FRTDGHPIMASGSPIGHIGLWDLEEKKLVSQMRDAHTTAIAGLTFLQNEPLLITNGADNA
IRVWIFDVAGGDGRLLRHRMGHSAPPAKIQHHDQSGLHILSAGQDGTLQSFSTVHERFNK
SLGHGTLNKTKAKKKGVRNDTEKLPAITTFASETARQSDWDGIIACHRGFLMTTTWNYQK
GSMGAHRLEPERFNRNRSLNVHATAVDITSCGNFAVIALSSGHIDVYNMQSGFHRGHYGE
DKAHAGPVRGVAVDALNQLTVSVGADRLLKIWKFKSKEELHTHSLPAAPASSQLHRDSGM
LAIALDDFSVHILDMETRRIVRRFSGHRGQINDMTFSPDGRWLITASMDCAIRTWDLPSG
SLVDCFLVDAAAVSLSMSPTGNFLASSHVDGLGVYLWSNNTLCSMVSLRPLPADYEPTVI
MLPGTCPSKETEEEEVLDVDSEMAEYISPAQLDEHLVTLSLLPDSRWKNLLHLDIIKKKN
KPKEPPKLPKAAPFFIPTIPGLVPQFALPNTPSEDQSKVVNLGVLAQKSTFYVQLENALD
SNSYEEPVKLLRELGPSAIETELRALSPDMGGDVRVMQSFLKMISSILQTKRDFDLAQAY
LALFLKLHLRFIADQPELLKEAESVSANLEEMWMSMQTLLNQNICLLSYIKSALL
NT seq 2688 nt   +upstreamnt  +downstreamnt
atgatcagtatgtctacgggaaagaaaggaagcgtaatcttctctggattcagggcgctg
gggctttactctaaccatctggcgcacgtgcttcgcttccataagaaacacagagagttc
tatgtgatcactgcagtcggacagtgtttccacacatataatgtaaagaaacttggaatt
gttgcagtcagtaatgctctcccagaagacatttcatccctagcggcggaccgtatgctt
gtctatgctgcatatggaaaacttgtctcagcttttgcaaaaaacaaagaggttgttcac
acatacacaggccatcaagctgatgtgcacttactgttgccttttggagatcatttcatt
tctgttgacaaggacaatgttgtcattatttgggatgtcgagtctgaagacacatacctg
cagatttcatacgacaaagcatcatttgaagtctctgctttgatgcacccgagcacctac
ctgaacaaaatcctgtttggaagcagtcaagggagtcttcagttatggaacatcaaatca
aacaaactcctattcacatttcctggatgggcaactgctgtaactgttcttcaacagact
ccagctgtggatgttgtgggtgtgggtttagcatctggtcagatcatcattcacaatatc
agatttgatgaaacactgatgaagttccaacaagactggggtccagtcacagctttatcc
ttcaggacagatgggcatccaataatggcatctggcagtcctatcggacacatagggctg
tgggatttagaggagaagaaactagtcagtcaaatgcgagatgctcatacaacagccatc
gctggcctcacatttcttcaaaatgaacccctcctgatcaccaatggagcggacaatgcc
atacgggtgtggatttttgacgttgccggaggggacggccgtcttctaagacatcggatg
ggtcacagtgctccaccagcaaagattcagcaccatgaccagagcggcttgcacattctt
agtgcaggtcaagatggtactttgcagtcattttcaaccgttcatgaaaggttcaacaag
agtttggggcacggcacccttaacaaaacaaaagctaaaaagaaaggtgtgaggaacgac
acggaaaaacttccagccatcacaacttttgcctcagaaacggctcgtcagagtgactgg
gatggcattattgcatgccaccgcggtttccttatgactacgacatggaactatcagaaa
ggttcaatgggtgctcacaggttggagcctgaacgctttaacaggaaccgcagcctcaat
gtccatgcaaccgctgtggatatcacctcctgcgggaactttgcagtgattgcgctgtct
tcaggacacattgatgtgtacaacatgcagtctggttttcaccgaggacattatggagag
gacaaggcgcatgcagggcctgtgcgtggggtcgctgtggatgctctaaaccagttgact
gttagtgtgggagcagatcgccttctgaaaatctggaagttcaaatccaaggaggagtta
catacacacagcctgccagccgccccagcttcatctcagcttcacagggacagtgggatg
cttgctatcgctctggatgatttttctgttcacattctggatatggagaccaggaggatt
gttcgtagattctctggacatcgtgggcagatcaatgacatgacatttagtccagatgga
cgttggctgattacagcatctatggactgcgccatcagaacatgggatcttccatctggc
agtttggtcgactgtttcctggtagatgcggcagccgtcagtctcagtatgtcccctacc
gggaacttcctggcctcatcgcacgttgacggtctaggtgtttatttatggtccaataac
acactgtgcagtatggtgtcattgcgccctctacctgcagactatgagccgactgtgatc
atgctgccaggcacctgcccgagtaaagaaacagaagaagaggaagttttagatgttgac
tctgagatggctgagtacatttcaccagcacagctggatgaacatctggtcacactctca
ctgcttcctgactctcgctggaagaacctgctgcatcttgacatcatcaagaaaaagaac
aaacccaaagagcctccaaaattacccaaagcggcacccttcttcattcccaccattcca
gggctggtgccccagtttgctctacccaacacaccctcagaggaccagtctaaagttgtc
aacttgggagtgttggcacagaagtccaccttttacgttcagcttgagaatgctttagac
agcaactcatatgaggagccagtgaagctgctgagagagttgggcccctctgccattgaa
acagagcttcgggcactgtctccagatatgggtggagatgtcagagttatgcagagcttc
ctcaagatgatcagcagcattcttcagaccaaaagagattttgacctggctcaagcctac
cttgcattgttcctcaagctccatcttcggttcatcgcagaccagcccgaactattgaag
gaggcagagagcgtgtctgcgaacctggaggagatgtggatgtccatgcagacgctctta
aaccagaacatttgtctgttgtcttatatcaagagtgcgttattataa

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