Ctenopharyngodon idella (grass carp): 127513194
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Entry
127513194 CDS
T08802
Name
(RefSeq) protein shortage in chiasmata 1 ortholog isoform X1
KO
K28108
shortage in chiasmata 1
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cide03036
]
127513194
Chromosome and associated proteins [BR:
cide03036
]
Eukaryotic type
Meiosis-specific proteins
Others
127513194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
127513194
NCBI-ProteinID:
XP_051750779
LinkDB
All DBs
Position
5:complement(39049281..39072442)
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AA seq
1479 aa
AA seq
DB search
MNNHTVSNSCGRTQQSASFKTVRYKGIDYISEASVRCRLMMNVLEIPVPFQLDGNIYPHN
GHLLDIAYRVPWKNKISMCTLQMTGSVMDDLKANIHFSDCLERFSVLQTGRRLEEVVPSS
NPASQCSIGTAEVLWLLDGVESSAIRSPWEESFSPCTPDACCFTCDDLTLPEEVIFGDHL
QRFKSHLPPFQTMLQRLKIMTVSDPVLNSSVNLLEGLVFRHCASYDAVLDEETGATFTGG
NVIEVFKKEAALNEESLMLPVELHMDSSRRQEPIFSFAKLQGFLNVTREPIEERFPLKDL
FKEATFADKLTTELEILEMAESSLANVTFKEPKSPVALRSYAEMELDLPLSPCNHTLCLP
DLFMPSRLLSAEILSPVYKQHFMSDSDCENMEKAVWMAEKHPQCASKFLLAEPQVTKPLV
HIQSLSELLTLLKVEMEPVPEPKDNMGQFHFTDSTVTMPNLSIYTEKIYTKKCKRAVRES
HMDEIFSPLSIVKIDELLSKCASNAGNEQNHSVSSALPSSGRPTAVHPSQSKPLQSAVPT
QVERGTTVKFFIMERMSHQGDSSTVTTTGGIDCKAVEIEQHMSSPAERCFGSQTISSTCL
SEKQHSLVEMSKSSPLKHGVKDIEVISTIRKLPEKSEQRRENIISKSSPLSNCFRGRKGN
NSVVHTYEDTLMSFVTLRKMSPMQKPQQSSPTSAEVTVNQNSIGKALPDNRINVVNHASD
AGRSVIASEKSFPCEEKQEIISKIVYVQATESQRHAYRELHAMALPSMSKMQKLGISALN
NRDFGTLSSELTRFLLKQQERMLRTEQDADSVNEMPLLHILVTLKEHVLFGCDLNAAAEY
LAQAKDSCTLSCLNELLRKFEVLQYLSQKRQEPNPKLLELQEQINTWMNSHANHNTRVLV
LTVNGVNKELLSALNQVSGNSVSEIVPGEGKHKVVSREVMDRLSYSRCVVVCSQHIGPDF
PWQSFSVVFELHCVGHSPFGSVCSERNIDFISFSTAVPESTDISEESTAKSYLDTVPFVL
LITDGLLNRLKIQFTLETMYNIVLLERKHSPSALKLGGTHFDVITVDETTAILIQELSEL
DMKIGQASERVVMRLSALSLQFSRCWLILHCAENHRALISSNIYINLVHIYSASVLFGIK
SEKFDVKVLMVCEEEEIASYIYQISLHTLMNSERDGLSWLDRDWLSVRPTEAEHCLLHFP
CINPLIAQLMLRRAPSLQWLLGASFFELQEMFPQIPHKVIKLFSDITAESKVKKATLKSE
NTPFSDINSPAHPHLPPWTQDLDKPQLDLEDKTPYSQFTQLIAGHNRRRGEETWRKNELS
LPDSTHSHSFNPLLPSQFSQASATVSVWQPQGEGFIQHPNLVPGRAVPRGSARVPLAPLP
TSEVLGFRNTACAFSSRPQGQTHRSSPENDPPRTTGEERKRRGGEDAHSDFGPNLRDYWS
VFTGETSVQQKSSLNCIAEETTAILKTHFFPIGNRSSGR
NT seq
4440 nt
NT seq
+upstream
nt +downstream
nt
atgaataatcacaccgtgtctaattcatgtggtcgaacccaacaaagtgcaagtttcaag
actgtcaggtataagggtattgattacatctctgaggcttcagtcagatgcagactgatg
atgaacgtgttagaaattccagttccattccagctagacggcaacatctaccctcacaat
ggacacttgttagacatcgcttaccgggtaccatggaagaacaaaatatccatgtgtact
ctacaaatgactggatctgtaatggatgacttgaaggccaacatacatttcagtgactgt
ttggaaaggttcagtgtgttgcagacaggaagaagactagaggaagtggttcccagctct
aatcctgcctctcagtgcagtattggtactgcagaagtcctctggcttttagatggagtt
gagagcagtgccatcaggtcaccttgggaagagagtttcagtccatgtacaccagatgca
tgttgctttacctgtgatgatctcactctgccagaggaggtgatattcggtgaccatctg
cagcggttcaaaagccacctgcctccatttcaaacgatgcttcagaggctgaagatcatg
actgtctcggatcctgttctcaattcatcagtaaatctcttagaagggcttgtttttaga
cactgtgcctcatatgatgcagttttagacgaagaaacgggtgccacatttactggagga
aatgttatagaggtgttcaaaaaagaggcagcactgaatgaagagtcactaatgttgcct
gttgaacttcatatggattcatcccgaagacaagagccaattttttcttttgcaaaactg
caaggttttctaaatgtcacccgagaaccaatagaagaacgtttccccttgaaagatctt
tttaaagaagccaccttcgctgataaactcacgactgagttggagatcctggaaatggct
gaaagcagtttagctaacgtcacctttaaggagccaaaatctccagttgctttgaggtct
tatgctgagatggaattagacctgcctctttcaccatgtaatcatacgctgtgtctacca
gacctgtttatgcccagcagacttctgtcagctgaaatcctgtcaccagtttataagcag
catttcatgtcagacagtgattgtgaaaatatggaaaaagccgtttggatggcagagaaa
catccccaatgcgcgtctaagtttttacttgctgaaccacaggtaactaagcccttggtc
cacattcagtcactttcagagcttcttacactgctgaaggtggagatggaaccagtccca
gaacccaaagataatatgggccagtttcacttcacggacagtacagtgacgatgcctaat
ctctccatctacactgagaaaatttacacaaaaaaatgcaagagagctgtgagagaatca
cacatggatgaaatattctcaccactgtctattgtgaaaatagatgagttgctgagtaag
tgtgcctcaaatgctggaaatgagcaaaatcactctgtttcctcagcactgccatcttca
ggccgtcccactgcagttcacccttcccagagtaagcctctgcagtcagctgtacctaca
caggtggagagagggacgactgtgaagttcttcataatggagcgcatgtctcaccaagga
gacagttctacagtgacaacaactggaggaatagactgtaaagctgtagagatagagcaa
cacatgtctagtccagcagaaagatgctttgggagccagacaatttcctccacatgtctt
tcagagaaacaacacagtttggtcgagatgtctaagtcatctccattgaagcacggtgtt
aaagatattgaagtaatatccactatacgtaaacttcctgagaagtcagaacagagaaga
gaaaacataatctctaaatcatctccgttatcaaactgttttagaggcagaaagggaaac
aattcagtagttcatacttacgaagacactttaatgtcttttgtgacattaagaaagatg
agtccaatgcaaaaacctcaacagagcagtccaacatctgcagaagtaaccgtgaatcag
aattctattggaaaagccttgcccgataacaggataaatgtagtgaatcacgcctcagat
gcaggaaggagtgtcattgcctctgagaagagctttccctgtgaagagaagcaagagatc
atcagcaagattgtatacgtccaagccacagagagtcagagacatgcttatagggaactg
catgcgatggctctgccctctatgagtaaaatgcagaagttgggcatctctgctttgaac
aacagagactttggcactctgtcttccgaactcacacgattccttctaaagcagcaggag
cgaatgcttcggacagaacaggatgcagatagtgttaatgagatgccactgctacatatt
ctggtaacactgaaggaacacgtcctcttcggatgtgacctcaatgcagctgctgagtac
ctggctcaggcgaaggactcctgtactcttagctgtttgaatgagctgttgaggaagttt
gaggtattgcagtatctgagtcagaagaggcaggagcccaaccctaaactactggagctc
caggagcaaatcaacacatggatgaactcccacgctaaccacaacactagagtcctagtg
ttaacagtgaatggtgtaaacaaagagctgctttcagctctcaaccaggtatcaggaaac
tctgtgtctgaaatcgtcccgggtgaaggaaagcataaagtagtgagcagagaagtgatg
gacagactgtcctacagtaggtgtgtcgttgtgtgcagtcagcacattggtcctgatttc
ccatggcagagtttcagtgtggtgtttgagcttcactgtgtgggtcactcgcccttcggc
agtgtgtgttcagagagaaacatcgactttatctccttctccactgcagtgcctgaatcc
acagatatctcagaagaatcaactgctaaatcatatctggacactgttccatttgtgctg
ctcatcacggatggtttactgaaccgcttaaagatacagttcacactggagacaatgtac
aatattgttctgctggagaggaaacattctccatctgcactgaagctgggcggaacccat
tttgatgtcatcactgtggatgagaccactgccatcctcatccaggagctgagtgagttg
gacatgaagattggacaagcatctgagcgtgtcgtcatgagactctcagcactatctctg
cagttcagccgctgctggctcattctgcactgtgccgagaaccacagggcattgatttcc
agtaacatctatataaatctggttcatatctattctgcatctgtgctgttcggaatcaag
tctgagaagtttgatgtcaaggtgttaatggtgtgtgaggaagaagagatagcgagctac
atctatcagatctccttacatactctgatgaattcagagagagatggactgagctggttg
gatagagattggctcagtgtgcggcccacagaggcagagcattgcctattgcattttccc
tgcattaatcctctgattgctcaactgatgttgaggagagctccatcactgcagtggctg
ctgggagcttctttctttgagctgcaggaaatgttcccacagatccctcacaaagtcatt
aagcttttcagtgatattacagctgagtccaaagtcaaaaaggccaccctgaagagtgag
aatacacccttctcagacataaacagcccagctcatcctcatctgcctccctggactcag
gatcttgataaacctcagttagacctggaggataagacgccatatagccagtttacacag
ttgattgcaggtcataacagaagaagaggagaggaaacatggagaaaaaatgaattatct
cttccagattcaactcactctcactcattcaaccccttattgccaagtcagttcagccaa
gcttcagctacagtgagcgtctggcagccgcagggtgaaggatttattcaacacccaaat
ctagtgccaggccgagctgttccccgagggtctgcccgtgttcccctggctcctctgccc
acttctgaagtgctggggttcaggaacactgcgtgtgctttcagctctaggccgcagggt
cagactcaccggagctcacctgagaacgatccgcctcgcacgacaggagaggagaggaag
aggcgaggaggagaagacgcgcacagtgactttggaccaaatctgagagattactggagt
gttttcacaggagaaacatctgtgcagcagaagtcttcattgaattgcattgctgaagaa
acaactgcaatattaaagacacatttctttcctataggaaaccggagctcaggtaggtga
DBGET
integrated database retrieval system
