KEGG   Ctenopharyngodon idella (grass carp): 127513262
Entry
127513262         CDS       T08802                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
cide  Ctenopharyngodon idella (grass carp)
Pathway
cide03030  DNA replication
cide03410  Base excision repair
cide03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cide00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    127513262
   03410 Base excision repair
    127513262
   03420 Nucleotide excision repair
    127513262
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cide03032]
    127513262
   03400 DNA repair and recombination proteins [BR:cide03400]
    127513262
Enzymes [BR:cide01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     127513262
DNA replication proteins [BR:cide03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    127513262
DNA repair and recombination proteins [BR:cide03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      127513262
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 zf-DPOE DNA_pol_B DNA_pol_B_exo2 RNase_H_2 Sigma70_ner
Other DBs
NCBI-GeneID: 127513262
NCBI-ProteinID: XP_051750890
LinkDB
Position
5:complement(37373550..37398578)
AA seq 2285 aa
MVLQNSGRYKSDRGGDQDNQQDDASALSAVKRLERSQFTDGMDERFGFERMKEPGEKTGW
LINMHPTEILDDDKRMISAVDYYFIQEDGNRFKVALPYKPYFYIATKKNCEREVISFLSK
KFQGKVAKLEVVPKEDLDLPNHLVGLKRSYIKLSFNTVDDLIKVKREISPAVRKNREREK
SNDAYTSMLSSALVGGSVVTEDEDGSSKKMTEQLDNILDMREYDVPYHVRVSIDLKIHVA
HWYNVRYRGSAYPPEIARRDDLVERPDPVVLAFDIETTKLPLKFPDAETDQIMMISYMID
GQGFLITNREIVSEDIEDFEFTPKPEYEGPFTVFNEPDEASLIQRWFEHVHETKPNIFVT
YNGDFFDWPFVEARAAQLGLNMYREIGFQKDNQGEYKASQAIHMDCLRWVKRDSYLPVGS
HNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYLYMKYVHPFIFAL
CTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQVFNKLTDDGHVLDSETYVG
GHVEALESGVFRSDIPCRFKMNPAAFDFLIQRVDRTLRHAIEEEEKIPLEQVTNFNEVCD
EIKRKLISLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKPGA
NCQRRMAWQWRGEIMPASRSEFHRIQQQLESEKFPPLFPNGHPRAFHELNREEQARHEKK
RLGDYCRKAYKKVHLTRLEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKLSS
AQESGDAAEVKRCKNMEILYESLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGAN
IITQARELIEQIGRPLELDTDGIWCVLPNTFPENFVIKSTNEKKSKVTISYPGAMLNIMV
KEGFTNHQYQELVDPASLTYETRAENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNE
DGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGTTLEEVYASVAKVADYWLDVLYSKA
ANMPDAELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYVIS
RKPEGSPVTERAIPLAIFQAEESVKKHFLRKWLKMPSLHDLDIRSILDWSYYIERLGSAI
QKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISELFTSEGKRQVAHQTLA
SGETPDMEDFGAPQRPLQPAILISTKRKRISQAEDSQAESQEQELTQSWREILGPPPAMG
ASREEILVWLRYHKKKWELQLRQRKERRKRRRLIDGESQPTGGGVIRDGPTTGLGSFLRR
TARSILDMPWQIVQIAETSHPGLYKLWAVIGSDLHCMKLNIPRVFYVNQRVPKQEEGATC
KKVNRILPRSGVAYYLYQYAVPEDMYQEHINEINADLSAPDIEGVYETQVPLLFRALVQL
GCMCMVNKQVVRDLAGREADTFDLEHLEMRSLAQFSYLEPGSVRHIYLYHHSQGHKALFG
LFIPSQRKASIFVLDTVRSNQMPNLSSLYGAERTALLEKTTEELLPPEKHLFEVRAENDV
KAIYRALQRILLNYKEERRGPTLIAVQSNWELRRLAAGMTVLEEFPVVPVHVIDEISYNV
LDWQRHGARRMIKHYLNLDSCLSQAFDMARYYHLPVGNLPQDISIFGSDLFLARHLRKHN
HLLWLSPTARPDLGGKEADDSRLVMESDERGSMEINSQGCYSTVCVELDIQSLAVNTILQ
SQHVNDMEGGASMGVSFDVIQHASLEEMMSGNQGANAVASYDETALCSNTFRILKSMVVG
WVREITQYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLLNMMKKIFLQLVAEFKRLGS
SVIYGNFNRLILCTKKRRIDDSIAYVEYITNSIHSKEIFHSLSITFSRCWEFLLWMDPAN
YGGVKGKLPSSLLYGEHGNEKKTKKDGAEEAGSEDEDEDEENQGEDEEQDGEEDVEDLIE
SNWNIMQYLPQTASCQKYFLMITSAYIAAVYHSMRQELRRNAPGATPIKRRGATQASQQP
TGDVSALPGLITFSQEYVSSELTQNFFTITQKIQKKVSSTRSVTLPSEMFPVLPGSHLPL
NNPALEFIKYVCQVLSLDANIVNQVNKLKRDLLRLVDVGEFSEDAQFRDPCKSYVLPEVI
CHHCNFCRDLDLCKDPAVSQDGSVLPQWFCSNCQAQYDTESIEMALVEALQKKLMSYTLQ
DLECAKCKGVKEANMPLYCSCAGDFNLSFTTKSFSEQVEVFRNIAAHYNMSFLLETIDWV
LSMNA
NT seq 6858 nt   +upstreamnt  +downstreamnt
atggttttacaaaacagtggccgatataaatcagaccgaggtggggatcaggacaaccaa
caggatgatgcatctgctttgtcagctgtcaagcggctggagcgcagtcagttcaccgat
gggatggacgagcgctttggcttcgaacggatgaaggagcctggtgagaaaacgggatgg
ctgatcaacatgcacccgactgagattctggatgatgacaagcggatgatcagtgctgtg
gactattacttcatacaggaagatggaaacaggttcaaggttgctcttccctataagccg
tatttctatatagccactaaaaagaactgtgaaagagaggttatctccttcctgtcaaag
aagttccaagggaaagtggcgaagcttgaagttgtcccaaaggaagatttagatctgcct
aatcacttggtgggcctgaagaggagctacatcaaactctcttttaacactgtggatgac
cttattaaagtgaaaagggagatctcacctgctgtccgcaagaacagagagagagagaag
tccaatgacgcctatacaagcatgttatccagtgctttggttggtgggagtgtagtgacg
gaggatgaggatgggtcgtcgaagaagatgactgagcagcttgacaacattttggacatg
cgagaatatgacgtgccatatcacgtccgtgtttctattgacctgaagattcatgtggct
cactggtataatgtgcggtacagaggaagtgcctatcctcctgagattgcgcgcagggat
gatcttgtggaaagacctgatcctgtagtgttggcatttgatatcgagaccactaaactc
cctctgaagtttcctgatgctgaaacagaccagattatgatgatatcatacatgatagat
ggacagggcttcctcatcacaaacagagaaattgtctcggaggacattgaagactttgag
ttcacccctaaacctgaatatgagggacccttcactgtatttaatgaacctgatgaggcc
tctctcattcagagatggtttgaacatgtccatgagaccaagccaaacatttttgtcact
tacaacggagatttctttgactggccatttgtagaggccagggcggcccaacttggcctg
aatatgtatcgggagatcggcttccagaaggacaatcagggagaatataaagccagccaa
gctattcacatggactgcctcaggtgggtaaagagagacagttacctgcctgtaggaagt
cacaacctcaaggctgcagcaaaagctaagttaggctatgaccctgtagagctggaccca
gaggagatgtgccgtatggctactgaagaaccacagactctggccacctattcagtgtct
gacgctgtggccacatactacctctacatgaaatatgttcatcccttcatttttgccctc
tgcaccattattcctatggaacccgatgaggttttgcggaaaggctccggtaccctgtgt
gaagccttgctgatggttcaggccttccatgccaacattatcttcccaaacaagcaggag
caggtctttaacaaactcacagatgacggtcatgtactcgactctgagacttatgtgggt
ggtcacgtcgaggctctggagtctggtgtgtttcgcagtgacatcccctgtcgctttaaa
atgaatccagcagcgtttgactttttgattcagagggtagaccgtactcttcgtcatgcg
attgaggaagaggagaagattccccttgagcaggtcaccaactttaatgaggtgtgtgat
gagatcaaaaggaagctgatctctctgaaggaagtgcccaacagaattgagtgtcctctt
atttaccatctggatgtgggggctatgtaccccaacatcatcctcaccaacagactacag
ccctctgccatggtggacgaggcgacctgtgctgcctgtgattttaataaacctggtgca
aactgtcagcgcaggatggcatggcagtggagaggagagatcatgccggccagtaggagt
gagtttcatcgcattcagcagcaattggagtcagagaagtttcctcctctctttccaaat
ggtcatcctcgtgctttccatgagctcaatagagaagaacaggctcgtcatgagaagaag
cgcttgggagactactgtagaaaagcctataagaaggttcacctgaccagactagaggag
agagtcactaccatttgccagagagagaactccttttatgtcgatacggtccgagccttt
agagaccgtcgatatgagttcaaaggactccacaaggtgtggaagaagaagctgtcttca
gcacaggaaagcggggacgcagcagaggtgaagcgctgcaagaacatggagattctctat
gagtctctgcaactggcgcacaagtgcatcctcaactccttctacggatacgtcatgaga
aaaggagcacgatggtactcgatggagatggctgggattgtgtgtttcaccggtgccaac
atcatcacacaggccagagagctcattgagcagatcgggaggcctctggagttggacact
gatggtatctggtgtgttcttcccaacacttttcctgagaactttgtcataaagtccacc
aatgagaagaagtcaaaggtgaccatcagttatccaggagccatgctcaatatcatggtc
aaggagggcttcacgaatcatcagtatcaagagctggtggaccctgcatctctaacatat
gagaccagagctgagaacagcatcttctttgaagtggatgggccatacttggctatgatc
ttgcccgcctccaaagaagaaggaaagaagctaaagaagaggtatgccgtgtttaacgag
gacgggtctttggctgagctgaaaggatttgaggtgaagaggagaggagaacttcaactc
attaagatcttccagtcatctgtatttgaggccttcctgaaaggcacaactctagaggag
gtttatgcctctgtggctaaagtggctgactactggcttgatgtgctctacagcaaggct
gctaacatgccagatgcggagttgtttgagctgatttcagaaaaccgctcaatgtcccgt
aaactggaagattatggagaacagaaatctacctccatcagcacggccaagcgtcttgct
gagttccttggtgatcagatggtgaaggacgctggcctcagctgtcgttatgtcatctcc
cgcaaaccggagggctcgcccgtcactgagagggcgatccctctggccattttccaggcc
gaagagagtgttaaaaagcatttcctacgtaaatggctgaagatgcctagcctccatgac
cttgacattagatctattctggactggagttactacattgagcgattgggcagtgctata
cagaaaatcatcactattcctgcagctctacaacaggtgaaaaacccagtacccagagta
cgacatccagactggctacataagaagcttctggaaaagaatgacatctacaagcagaag
aagattagtgaactctttaccagtgagggaaagagacaggtggcccatcaaactctagca
tcaggtgagactcctgatatggaggatttcggtgctcctcagcgccccttgcagcctgcc
atactcatcagcacaaaaaggaagaggatatctcaggcagaggacagtcaggctgagtct
caagagcaagaactcacacagtcttggagagaaatactggggccaccgccagccatgggc
gcctcccgggaggaaattcttgtctggttgcgttaccacaagaaaaaatgggagctgcag
cttcgccagagaaaggaacgccgaaagcgacgacgtttgattgacggggaatctcagccg
acagggggcggtgtaatccgtgatggaccgacaacagggctaggcagcttcctgcggaga
accgcccgcagtattttggacatgccctggcaaattgtacagattgcagagaccagtcac
ccaggtctttataagttgtgggcggtcattggcagtgacttgcactgcatgaagctcaac
atcccacgagtgttttatgtcaatcagagagtgcctaagcaagaagagggggctacctgc
aaaaaggtgaaccggatacttccacgctctggtgtggcgtattacctgtaccagtatgca
gttcctgaggacatgtaccaagaacacatcaatgagatcaatgctgacctttctgctcct
gatattgagggtgtctatgagacacaggttccgctgctgttccgggctctggtccagctg
ggctgcatgtgtatggtcaataaacaggtggtcagagacctggctggcagagaggctgat
acctttgacctggaacacctagagatgagatccctggcccagttcagctaccttgagcca
ggcagtgtaaggcacatttacctgtaccatcacagtcagggccataaggctctctttggc
ctcttcataccatcccaacgcaaagccagcatctttgttctcgacacggtacgcagtaat
cagatgccgaacctgagttcattgtacggagcagagcgcacagcactgctggagaagacc
acagaggagcttctgccacctgagaaacatctgtttgaagtgcgtgctgaaaatgacgtc
aaagccatctaccgtgcactgcagcgcattcttctcaactacaaggaggagcggcgtggt
ccgaccctgattgctgttcagtctaactgggagctgcggcgtctggcggccggcatgact
gtactggaagagttcccggtggtgccggttcacgttattgatgagataagctacaatgta
ctggactggcaacggcacggagctcgccgcatgatcaaacactacctgaacctggacagc
tgcctctcacaggcttttgatatggccaggtattatcaccttcccgtgggaaacctgcct
caggatatttctatatttggatcggatctatttcttgcacgtcatctcagaaagcacaac
cacctgttgtggctgtcacctacggcacggccggaccttggggggaaagaggctgacgac
agcagactggtgatggagagtgatgagagaggctccatggagatcaacagccagggctgc
tactccacagtttgtgtggagttggatattcagagtttggcggtgaacaccattctgcag
tcccagcacgttaacgacatggaaggcggggctagcatgggcgtcagttttgatgtcatt
cagcatgcatcactagaggaaatgatgtcagggaatcagggggcaaacgcagtggccagc
tatgacgagacagcactctgctccaacacattcaggattctgaagagtatggttgttggc
tgggttcgagagatcacgcagtatcataacgtctatgctgataaccaggttatgcatttt
tatcggtggctgcgatcacccagttctctgctgtacgacccggccctgcaccgcaccctc
ctcaacatgatgaagaagatcttcctacaacttgtggcagagtttaagcgcctgggatca
tctgtgatctatggaaacttcaaccgtctcatcctctgcaccaagaaacgacgtattgat
gactccattgcatacgtggagtatatcactaacagtatccattcaaaggagatcttccac
tctctgtccatcacattctcacgctgttgggagtttctgctgtggatggatcctgctaac
tatggaggagtgaagggaaagctgccctcaagccttctgtatggagagcatggcaatgaa
aagaagacaaagaaggatggagcagaggaggctggaagtgaggatgaggatgaagatgaa
gaaaaccaaggggaggatgaagaacaggatggggaagaagatgtggaagacctgattgaa
agtaactggaacatcatgcagtatcttcctcagacggcatcctgtcagaaatactttctt
atgatcacttcagcctacattgcagctgtctatcacagcatgagacaagagcttcggcgg
aacgcccctggtgctactcccattaagagacgaggagcgacccaagcatcccagcagcca
actggggatgtcagtgcacttcctggtttgattacattctcccaggagtatgtgtcaagt
gaactcacacagaactttttcaccatcactcagaagattcagaagaaagtgtcgagcact
cgcagtgttacactcccttcagagatgtttcctgttcttcctggttctcacttgcccctc
aataaccctgctctggagtttattaaatacgtctgccaggtgctctctctggacgccaac
attgtcaatcaggtgaataaactgaagcgagatcttttgcgattggtggatgttggagaa
ttctcagaggacgcccagttccgtgacccctgcaagtcctacgtcctgccagaggttatc
tgccaccactgtaacttctgtcgtgaccttgatctctgcaaagaccctgcggtttcccag
gatggttcagttcttcctcagtggttctgttctaactgtcaggcccagtacgacacagag
tccatagaaatggccctggtggaggcgctccagaagaaactcatgagttacaccctacaa
gacctggaatgtgccaaatgcaaaggagtgaaggaagcaaatatgccgctgtactgtagc
tgtgctggagatttcaacctcagcttcaccacaaagagcttctctgagcaggtggaagtg
ttccggaacattgccgcccactataatatgagcttcctgctagagaccattgactgggtc
cttagtatgaacgcatag

DBGET integrated database retrieval system