Ctenopharyngodon idella (grass carp): 127513288
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Entry
127513288 CDS
T08802
Name
(RefSeq) zinc phosphodiesterase ELAC protein 1-like
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
cide
Ctenopharyngodon idella (grass carp)
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cide03016
]
127513288
Enzymes [BR:
cide01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
127513288
Transfer RNA biogenesis [BR:
cide03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
127513288
Prokaryotic type
127513288
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-GeneID:
127513288
NCBI-ProteinID:
XP_051750925
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Position
5:complement(45100987..45103963)
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AA seq
371 aa
AA seq
DB search
MSMDITFLGTGSAYPSPNRGASALVLRTEGENWLFDCGEGTQTQLMRSPLKASKITKVFI
SHLHGDHLFGLPGLLCTISLNSNPQPDQPPPCVDIYGPRGLRHFVRVALELSGSQLLFPY
AVHELEPSDDQCPAEGRLSPVQTSSSDTLHPQERPGRTICLDPDTDCYDLIDDKQFVVKA
FKLYHRVPSFGFSVEERERPGRLNTDLLKELGLKPGPLYGRLKNGESVTLDSGRVLTASE
VLEPALKGRKVCVFGDCSAALGEGFKRACQGADVLVHEATLEDGQHEKAVEHGHSTPSMA
AAVALACRAHTLVLHHFSQRYKPETLRRDGEDDVTELKRQAELMLQGSRTEVILAEDFLT
LPIALKKNLTL
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgtccatggacattacgtttctcgggaccggatcagcatatccgtctcccaatcgcggc
gcgtctgcgctcgtgttacggactgaaggggaaaattggctgtttgactgtggagaagga
acacagactcagttaatgaggagtccgctcaaagcaagcaaaatcaccaaagtgttcata
tctcacctccatggtgatcatctctttggtcttcctggtttactgtgcaccatcagtctg
aactcaaacccccagccggatcagcctcctccctgcgtggacatttacggcccgcggggg
ttaagacactttgtccgtgtggcgttagagctgtccggctcccagctgctcttcccatat
gctgtgcatgaactggagccatcagatgaccagtgtcctgctgaggggcgtctcagtcct
gtgcagacctccagcagcgatactcttcacccacaggagcggcccggcagaaccatatgc
ctggacccggacacagactgctatgacctcattgatgacaaacagtttgtggttaaagca
tttaagctgtaccacagagtcccatcatttggcttctcggtggaggaaagagaacgtcca
ggacggttaaacacagacctgttgaaagaactaggtttgaaaccgggacctctatacggg
cgtctgaagaatggagagtctgtgacactagatagtggacgtgtgttgaccgccagcgag
gtgctggaaccagcactgaagggccgtaaggtgtgtgtttttggggactgcagcgcggca
ctgggggaggggtttaaaagggcgtgtcagggggcggacgtgctggtgcacgaggccacg
ctggaggacgggcagcatgagaaggcagtggaacatgggcacagcactcccagcatggct
gctgcggtggcactcgcctgtcgggcgcacacgctggttctgcaccacttcagtcaacgc
tacaaacccgaaacactgcggcgagacggcgaagacgacgtgacagagcttaagagacaa
gctgagctcatgctgcaggggtcaaggacagaggtcattctcgcagaagactttctcacg
ctgcctattgcactcaaaaagaatttgacgctgtag
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