Ctenopharyngodon idella (grass carp): 127513328
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Entry
127513328 CDS
T08802
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
cide
Ctenopharyngodon idella (grass carp)
Pathway
cide03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cide00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127513328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cide03041
]
127513328
Spliceosome [BR:
cide03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
127513328
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
127513328
NCBI-ProteinID:
XP_051750982
LinkDB
All DBs
Position
5:3156147..3165662
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AA seq
497 aa
AA seq
DB search
MIAGVKRERDVDEDEDEEVRVKIGRSHVEDRRSRHCPYLDTINRSVLDFDFEKLCSISLS
HINVYACLICGKYFQGRGQKSHAYIHSVQFTHHVFLNLHTLKFYCLPDNYEIIDSSLEDI
TYVLKPTFTKQHISGLDKQGKLYRAYDGTTYLPGIVGLNNIKANDYANVVLQALSNVPPL
RNYFLEEDNYRGIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQAVVLCSKK
NFQITKQGDAVDFLSWFLNALHGALGGTKKKSSILTKVFQGSMRIFSKKLPHPDLPAEEK
EALLLKEEYQEEMSESTFLYLTLDLPTAPLYKDEKEQLIIPQVPLFNILGKFNGNTEKEY
KTYKENFLKKFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREYLTEEAQA
TEKVTTYDLVANVVHDGKPTEGSYRIHVLHHGTGKWYELQDLQVIDILPQMITLSEAYIQ
IWKRQDKDDGAESHSGA
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgatcgcaggcgtgaaacgggagagggacgttgatgaagacgaagatgaagaggtgcgt
gtgaaaatcggtcgttctcatgttgaagatcgcagaagccgccattgtccatatctggac
acaatcaacaggagtgttttggatttcgacttcgagaagctttgttcaatctctctttca
cacattaatgtctatgcctgtctgatctgtgggaaatatttccaaggtcgaggtcagaag
tctcatgcatacatccacagcgttcagttcacacatcatgttttcctgaatctccacacg
ttaaagttctactgcctgccagacaattatgagatcattgactcctcattagaggacatt
acgtatgtgctgaaacccacattcaccaagcagcacatctctggtttggataagcaggga
aagctgtacagagcctacgatggcacaacatatttgcctggaattgtgggtctcaataac
attaaggccaatgactatgctaatgtggttttgcaggcgctgtcaaatgtgccccctttg
cgaaactacttcctcgaggaggacaactatcgtggaattcgtcggccgccgggtgacatc
atgtttctgttggtgcagcgtttcggggagctcatgcgcaagctgtggaacccgcggaac
ttcaaagctcacgtgtcgccgcatgaaatgttgcaggctgtggtgttatgcagtaaaaag
aactttcagatcactaaacaaggggacgctgttgactttctctcctggttcctgaatgcg
ttgcatggtgctcttggtgggacaaagaagaaatcatccattctcaccaaggtgtttcag
gggtctatgcggatcttctcaaagaagcttccccatcctgacttgcctgctgaagagaaa
gaagcccttctccttaaggaggagtaccaggaggagatgtcggagtccaccttcctgtac
ctgacccttgacctgcccaccgcacccctctacaaagatgagaaggagcagctcatcatt
cctcaggttcctctcttcaacatcctgggcaagttcaatggaaacactgagaaggagtac
aagacctacaaagaaaactttctgaaaaagttccagctcaccaaacttcccccatacctc
atcttctgcatcaaacgattcacaaagaacaacttctttgtcgagaagaaccccaccatc
gtcaacttccccatcacgaatgtcgatttgcgcgagtacctcacagaagaggcgcaggct
actgagaaggtcaccacctacgacctggtggccaatgtagttcatgatggaaaacccact
gagggttcctatagaattcatgttctgcatcatggcacagggaagtggtatgaacttcag
gacctgcaggtgattgatatcctcccacagatgatcacactctcagaggcgtacatacag
atttggaagagacaagataaagatgatggagcagaaagccattcaggggcatag
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